FFCP PHASE1:Hg19::chr4:151502879..151502889,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=987 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1742 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-5bp_to_ENST00000503716,uc003ils.3_5end | |||
|cluster_id=chr4:151502879..151502889,- | |||
|coexpression_cluster_id=C1272 | |||
|description=CAGE_peak_8_at_LRBA_5end | |||
|id=chr4:151502879..151502889,- | |||
|ontology_enrichment_celltype=CL:0000064!2.02e-13!3;CL:0005012!2.02e-13!3;CL:0000067!2.02e-13!3;CL:0002304!2.02e-13!3;CL:0002504!3.80e-13!3;CL:1000279!3.80e-13!3;CL:1000280!3.80e-13!3;CL:0002588!4.72e-09!2;CL:0002552!1.32e-08!5;CL:0002556!2.69e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000333;7.35e-21;5!CL:0002321;1.31e-07;15 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0003099;3.15e-26;1!UBERON:0003852;3.15e-26;1!UBERON:0005062;1.44e-07;4!UBERON:0007284;1.44e-07;4 | |||
|ontology_enrichment_disease=DOID:169!2.27e-07!6 | |||
|ontology_enrichment_disease_v019=DOID:169;1.44e-17;6!DOID:171;5.98e-11;10 | |||
|ontology_enrichment_disease_v019_2=DOID:169,1.22e-17,6;DOID:171,5.41e-11,10 | |||
|ontology_enrichment_uberon=UBERON:0001444!3.73e-19!48;UBERON:0007625!1.14e-17!11;UBERON:0000488!4.82e-17!4;UBERON:0000020!3.96e-16!23;UBERON:0001032!2.24e-15!24;UBERON:0004456!2.24e-15!24;UBERON:0000970!3.69e-15!20;UBERON:0001456!1.35e-14!21;UBERON:0002104!2.31e-14!21;UBERON:0001778!2.02e-13!3;UBERON:0001775!2.02e-13!3;UBERON:0000019!1.05e-12!19;UBERON:0000047!1.05e-12!19;UBERON:0004088!1.05e-12!19;UBERON:0003072!1.05e-12!19;UBERON:0003071!1.05e-12!19;UBERON:0004128!1.05e-12!19;UBERON:0001155!8.04e-12!9;UBERON:0002203!2.10e-11!6;UBERON:0001768!2.10e-11!6;UBERON:0001801!3.58e-10!14;UBERON:0000033!6.38e-10!123;UBERON:0000059!1.29e-09!11;UBERON:0000063!1.34e-09!97;UBERON:0000153!2.98e-09!129;UBERON:0007811!2.98e-09!129;UBERON:0000013!9.01e-09!5;UBERON:0002410!9.01e-09!5;UBERON:0002298!5.08e-08!8;UBERON:0005085!6.80e-08!29;UBERON:0004121!1.22e-07!169;UBERON:0000924!2.35e-07!173;UBERON:0006601!2.35e-07!173;UBERON:0001758!2.69e-07!6;UBERON:0003672!2.69e-07!6;UBERON:0000165!7.58e-07!28;UBERON:0000930!7.58e-07!28;UBERON:0003129!9.73e-07!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0005705;3.15e-26;1!UBERON:0008193;3.15e-26;1!UBERON:0010912;3.15e-26;1!UBERON:0002514;3.15e-26;1!UBERON:0003457;3.15e-26;1!UBERON:0008907;3.15e-26;1!UBERON:0008001;3.15e-26;1!UBERON:0007213;3.15e-26;1!UBERON:0009891;3.15e-26;1!UBERON:0007914;3.15e-26;1!UBERON:0007375;3.15e-26;1!UBERON:0003323;3.15e-26;1!UBERON:0010258;3.15e-26;1!UBERON:0005253;3.15e-26;1!UBERON:0007842;3.15e-26;1!UBERON:0002397;3.15e-26;1!UBERON:0003113;3.15e-26;1!UBERON:0003277;3.15e-26;1!UBERON:0001709;3.15e-26;1!UBERON:0002244;3.15e-26;1!UBERON:0005620;3.15e-26;1!UBERON:0010364;3.15e-26;1!UBERON:0004288;3.15e-26;1!UBERON:0000013;7.35e-21;5!UBERON:0002410;7.35e-21;5!UBERON:0004089;7.77e-14;2!UBERON:0000010;4.67e-12;8!UBERON:0011137;5.17e-10;11!UBERON:0010323;5.17e-10;11!UBERON:0001708;1.44e-07;4!UBERON:0008895;1.44e-07;4!UBERON:0000075;3.61e-07;16 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005705,2.78e-26,1;UBERON:0008193,2.78e-26,1;UBERON:0010912,2.78e-26,1;UBERON:0002514,2.78e-26,1;UBERON:0003457,2.78e-26,1;UBERON:0008907,2.78e-26,1;UBERON:0008001,2.78e-26,1;UBERON:0007213,2.78e-26,1;UBERON:0009891,2.78e-26,1;UBERON:0007914,2.78e-26,1;UBERON:0009292,2.78e-26,1;UBERON:0003099,2.78e-26,1;UBERON:0007375,2.78e-26,1;UBERON:0003323,2.78e-26,1;UBERON:0010258,2.78e-26,1;UBERON:0007842,2.78e-26,1;UBERON:0009494,2.78e-26,1;UBERON:0010042,2.78e-26,1;UBERON:0010045,2.78e-26,1;UBERON:0010259,2.78e-26,1;UBERON:0010359,2.78e-26,1;UBERON:0009526,2.78e-26,1;UBERON:0002397,2.78e-26,1;UBERON:0003113,2.78e-26,1;UBERON:0003277,2.78e-26,1;UBERON:0001709,2.78e-26,1;UBERON:0004066,2.78e-26,1;UBERON:0002244,2.78e-26,1;UBERON:0005620,2.78e-26,1;UBERON:0004362,2.78e-26,1;UBERON:0010364,2.78e-26,1;UBERON:0010046,2.78e-26,1;UBERON:0005868,2.78e-26,1;UBERON:0007238,2.78e-26,1;UBERON:0004288,2.78e-26,1;UBERON:0004068,2.78e-26,1;UBERON:0010334,2.78e-26,1;UBERON:0003852,2.78e-26,1;UBERON:0010253,2.78e-26,1;UBERON:0000013,6.01e-21,5;UBERON:0002410,6.01e-21,5;UBERON:0005253,7.30e-14,2;UBERON:0004089,7.30e-14,2;UBERON:0000010,4.18e-12,8;UBERON:0010323,5.54e-10,11;UBERON:0000165,2.45e-08,29;UBERON:0000930,2.45e-08,29;UBERON:0011137,4.82e-08,14;UBERON:0001708,1.40e-07,4;UBERON:0008895,1.40e-07,4;UBERON:0000075,3.78e-07,16 | |||
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|short_description=p8@LRBA | |||
}} |
Latest revision as of 01:40, 16 September 2015
Short description: | p8@LRBA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_LRBA_5end |
Coexpression cluster: | C1272_medulloblastoma_neuroblastoma_colon_Osteoblast_normal_Ciliary_pons |
Association with transcript: | -5bp_to_ENST00000503716, uc003ils.3_5end |
EntrezGene: | LRBA |
HGNC: | 1742 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuroendocrine tumor | 1.22e-17 | 6 |
neuroectodermal tumor | 5.41e-11 | 10 |