FFCP PHASE1:Hg19::chrX:110039003..110039017,-: Difference between revisions
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(Created page with "{{FFCP
|id=chrX:110039003..110039017,-
|short_description=p2@CHRDL1
|description=CAGE_peak_2_at_CHRDL1_5end
|association_with_transcript=-10bp_to_ENST00000372045,ENST00000...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=91851 | |EntrezGene=91851 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29861 | |HGNC=29861 | ||
|TSSclassifier=strong | |||
|UniProt=Q9BU40 | |UniProt=Q9BU40 | ||
|association_with_transcript=-10bp_to_ENST00000372045,ENST00000394797_5end | |||
|cluster_id=chrX:110039003..110039017,- | |||
|coexpression_cluster_id=C29 | |||
|description=CAGE_peak_2_at_CHRDL1_5end | |||
|id=chrX:110039003..110039017,- | |||
|ontology_enrichment_celltype=CL:0000136!5.83e-08!15;CL:0000325!1.46e-07!39 | |||
|ontology_enrichment_celltype_v019=CL:0000136;8.42e-15;13!CL:0000064;7.72e-11;3!CL:0000067;7.72e-11;3!CL:0005012;7.72e-11;3!CL:0002304;7.72e-11;3!CL:0000306;2.99e-08;4!CL:0002222;2.99e-08;4!CL:0002224;2.99e-08;4!CL:0000075;4.21e-08;27 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,1.48e-12,15;CL:0000064,7.52e-11,3;CL:0000067,7.52e-11,3;CL:0005012,7.52e-11,3;CL:0002304,7.52e-11,3;CL:0000306,3.07e-08,4;CL:0002222,3.07e-08,4;CL:0002224,3.07e-08,4;CL:0000075,5.31e-08,27 | |||
|ontology_enrichment_development_v019=UBERON:0007297;2.71e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4231;3.86e-07;2!DOID:1907;3.86e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:4231,5.85e-07,2;DOID:1907,5.85e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!9.96e-36!115;UBERON:0003075!5.34e-25!86;UBERON:0007284!5.34e-25!86;UBERON:0002346!5.50e-25!90;UBERON:0003056!7.85e-23!61;UBERON:0001049!1.90e-20!57;UBERON:0005068!1.90e-20!57;UBERON:0006241!1.90e-20!57;UBERON:0007135!1.90e-20!57;UBERON:0002780!5.32e-19!41;UBERON:0001890!5.32e-19!41;UBERON:0006240!5.32e-19!41;UBERON:0003080!2.70e-18!42;UBERON:0002616!4.99e-18!59;UBERON:0001893!2.39e-17!34;UBERON:0005743!3.53e-17!86;UBERON:0002791!1.06e-16!33;UBERON:0001869!1.67e-16!32;UBERON:0000073!2.57e-16!94;UBERON:0001016!2.57e-16!94;UBERON:0002020!5.93e-16!34;UBERON:0003528!5.93e-16!34;UBERON:0001017!1.03e-15!82;UBERON:0000153!2.11e-15!129;UBERON:0007811!2.11e-15!129;UBERON:0000033!9.09e-15!123;UBERON:0000955!3.82e-14!69;UBERON:0006238!3.82e-14!69;UBERON:0000956!4.01e-14!25;UBERON:0000203!4.01e-14!25;UBERON:0000924!9.08e-13!173;UBERON:0006601!9.08e-13!173;UBERON:0004121!1.75e-12!169;UBERON:0002619!1.64e-11!22;UBERON:0001950!3.69e-10!20;UBERON:0000064!2.05e-09!219;UBERON:0007625!1.26e-08!11;UBERON:0000020!2.93e-07!23;UBERON:0000475!5.40e-07!365;UBERON:0001032!8.77e-07!24;UBERON:0004456!8.77e-07!24 | |||
|ontology_enrichment_uberon_v019=UBERON:0007625;3.33e-14;11!UBERON:0000488;7.39e-14;4!UBERON:0001456;5.07e-11;21!UBERON:0001801;6.72e-11;14!UBERON:0001778;7.72e-11;3!UBERON:0001775;7.72e-11;3!UBERON:0006947;4.08e-10;3!UBERON:0004054;4.08e-10;3!UBERON:0004175;5.65e-10;21!UBERON:0000019;5.89e-10;19!UBERON:0000047;5.89e-10;19!UBERON:0004088;5.89e-10;19!UBERON:0010230;5.89e-10;19!UBERON:0000020;6.67e-10;23!UBERON:0001032;2.06e-09;24!UBERON:0004456;2.06e-09;24!UBERON:0000970;2.21e-09;20!UBERON:0002203;3.23e-09;6!UBERON:0001768;3.23e-09;6!UBERON:0002200;3.23e-09;6!UBERON:0002104;7.31e-09;21!UBERON:0010077;2.99e-08;4!UBERON:0005389;2.99e-08;4!UBERON:0000484;2.99e-08;4!UBERON:0000965;2.99e-08;4!UBERON:0001803;2.99e-08;4!UBERON:0005904;1.12e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.99e-15,114;UBERON:0007625,3.36e-14,11;UBERON:0000488,7.22e-14,4;UBERON:0001801,6.76e-11,14;UBERON:0001778,7.52e-11,3;UBERON:0001775,7.52e-11,3;UBERON:0001456,2.34e-10,22;UBERON:0006947,3.30e-10,3;UBERON:0004054,3.30e-10,3;UBERON:0000020,2.00e-09,24;UBERON:0001032,2.00e-09,24;UBERON:0004456,2.00e-09,24;UBERON:0000019,2.22e-09,20;UBERON:0000047,2.22e-09,20;UBERON:0010312,2.22e-09,20;UBERON:0004088,2.22e-09,20;UBERON:0010230,2.22e-09,20;UBERON:0003072,2.22e-09,20;UBERON:0004128,2.22e-09,20;UBERON:0003071,2.22e-09,20;UBERON:0002203,3.18e-09,6;UBERON:0001768,3.18e-09,6;UBERON:0002200,3.18e-09,6;UBERON:0000970,7.34e-09,21;UBERON:0002104,7.34e-09,21;UBERON:0004175,2.76e-08,25;UBERON:0010077,3.07e-08,4;UBERON:0005389,3.07e-08,4;UBERON:0000484,3.07e-08,4;UBERON:0002546,3.07e-08,4;UBERON:0000965,3.07e-08,4;UBERON:0001803,3.07e-08,4;UBERON:0003073,3.07e-08,4;UBERON:0005426,3.07e-08,4;UBERON:0005904,9.60e-08,4 | |||
|phase1_expression=0.363356758541113,3.63970890614671,0.281908808191942,4.00293193412522,1.34088328328186,0,0,0,1.30592814099919,0,0,0,0,0,0,0,0,0,0,1.72369481307503,0.816002764977012,0.626909442956176,2.28988789704845,0.684372125364421,1.50651167513763,0,0,0,0,0,0,0,0,0,0,0,0.587200878669695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.18464610446916,5.32150553910154,6.93894806975696,0.196468613246569,0,0.370784442784429,0,0,0,0.238490624305342,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0,0,0,0.168336113954066,0.125118519871964,0,0,0,0,0,0,0,0,0,0,0,0.18611685633159,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0.265059536642971,0.232387885739037,0.310983165046111,0.504641701751257,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.31860211925429,0,0,0,0,0,0,8.6598805215164,5.10093781890338,8.33601729074334,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0.502548796003046,0,0,0,0,0,0,0,0.207970861530807,0,0.630809660135739,2.10854546986884,0,0,0,0,0,0.347534457872331,0,0,0,0,0,0,0,0,0,0,0.280660094433074,0,0,0,0,0,0,0,0,0.116210378459959,0,0,0,0,0,0,0.451199612907412,0.539107359730903,0,0,0.316654886678627,0,0,0.431831832204279,0,0,0,2.03901018436031,0,1.11937377361089,0,0,0.769350375349168,0.328014645699706,0,0.618246069886334,0,0,0,0,0,0,0.462145851343933,1.22802939780904,0,0.751941714077915,0.145016693914229,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.32218398827431,0.658589785919804,0,0,0,0,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191505370132367,0,0.324621940274555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.66270448179735,0,0,0,0,0,0,1.9882952955326,0.422008249231538,0.890469640183247,0,0,1.39473591775749,0.552567831062295,0,0,0,0,0,0,0,1.87422470710174,0,0,0,0.556608588971108,0,0,0,0,0,0,0,0.689486746482929,0.583209226766509,0,0,0.964771509003264,1.52581736317083,0.442317039724898,0,1.31631238292384,0,0,1.46205491157214,0,0,0,0,0.638002319463839,0,0,0,0,0,0,0,0,0,0,0.632994193584081,0,0,0,0,1.06149077404007,0,0,0,0,0.134802265961354,3.21031058919516,0.234264445725339,0,0.19566461893209,0,2.36750641709634,0,0.30607276163049,1.51647791108371,0,0,0,0,0,0,0,0,0,0,0,2.62090002363045,0,0,0,0,1.26085721434945,0,0.451961481561065,0,0.19871461170299,0.633107959558787,0.195551382734803,0.320635281006135,0.426905989478705,0,0,0.114536596165916,0,0,1.36677789121976,0,0,0,0,0,1.80126086612937,0,1.27746588066972,0,0,0.279282401272254,1.14580212005842,0,0,0,0.223171457441873,0,0,0,0,0,0,0,0,0.795229689809303,0.408610218334727,0.321506296930038,0.137539436597234,0,0,0,0.425246896606173,0,0.157611414598396,0.157363764404994,0,0,0,2.1440859791201,0,0,2.17199840701485,1.72844298240254,0.979762080328227,0,0,0,0,0,0,0.129282956361551,0,0,2.11444506695002,1.60181118851542,0.943225830597996,2.07119527673598,0.992332043623902,0,0,0,15.7765162977147,14.2893239592939,15.6236244149365,13.442777859102,0,0.886068179966986,0.854183854313742,0.876336514945499,0,0.332787154610557,0.124192805882767,0,0,0,0,0,0,0.144921028610825,0.149254802886874,0,0,0,0.50313580350515,0.889811221596536,0,0,0,0,0,0.449803112163605,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0.343395705182793,0,0,0,0,0,0,1.15761237161917,0,0.179088841081487,0,0,1.76689145945881,0,0.337884881306145,0,0,0,0.276516872303462,0,0,0,2.6208787907713,0,0,0,0,0,4.54012762853469,1.10463570151104,0,0,0.511577485214607,0,0.157265941855896,0.109209638192014,0,0.212574920101683,0.247871528518004,0,0,0,0,0,0,0.578063025868136,0,0.478901577171454,0.615349092722265,0.252071696221718,0.622415272177961,0.645902582527404,0,0,0,0,0,0,0,0,0.526472298444801,0.40341013740704,0,0,3.60298218522213,0,0.472763092328763,0,0.620060389503552,0.634158101939068,0,1.09651553371436,1.98484471355718,0,0,0.535701835878287,0,1.82089681270989,0.455324382702595,0.532214220975833,0.230467975111559,0,0,0.72350050919134,0,0,1.33438257845874,1.25692471932802,0,0.913158720509496,0,0,2.287249413653,0,0,0,0,0,0,0,0.430227358820278,0,0,2.11693525095465,1.60374807980835,0,0,0,0,0,0,0.307988420568741,0,0.485710993059139,0,0,0.118920090777569,0,0.109940516745429,0,0.231522474323834,0.218559560503957,0,1.71603825227734,0,0,0,0.8453114551668,0.169927114687817,0.0939839179798536,0.0644578879735772,0,0,0,0,0,0,0.143339583151451,0,0.543931921527318,0,0.5290268405154,0.371995018166751,0,2.59575937274273,0,0,0,0,0,0,0,0.530450887527676,0.803892390468535,0,0.103432995861895,1.0661699095049,0.714193294391221,0.129177819672012,0,3.70035146516024,0.381882949668989,0.808468755832877,1.52401723527873,0.342233301085281,0.0673520530145875,0.645499848534087,0.332660356546013,0,0.533636729388577,0,0,0,2.56707032784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| ||
|short_description=p2@CHRDL1 | |||
}} | }} |
Latest revision as of 01:07, 19 September 2015
Short description: | p2@CHRDL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CHRDL1_5end |
Coexpression cluster: | C29_mature_adipose_Adipocyte_breast_Lymphatic_vein_heart |
Association with transcript: | -10bp_to_ENST00000372045, ENST00000394797_5end |
EntrezGene: | CHRDL1 |
HGNC: | 29861 |
UniProt: | Q9BU40 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 1.48e-12 | 15 |
ciliated cell | 7.52e-11 | 3 |
ciliated epithelial cell | 7.52e-11 | 3 |
multi-ciliated epithelial cell | 7.52e-11 | 3 |
non-pigmented ciliary epithelial cell | 7.52e-11 | 3 |
crystallin accumulating cell | 3.07e-08 | 4 |
vertebrate lens cell | 3.07e-08 | 4 |
lens epithelial cell | 3.07e-08 | 4 |
columnar/cuboidal epithelial cell | 5.31e-08 | 27 |
Ontology term | p-value | n |
---|---|---|
adult organism | 2.99e-15 | 114 |
pigment epithelium of eye | 3.36e-14 | 11 |
atypical epithelium | 7.22e-14 | 4 |
anterior segment of eyeball | 6.76e-11 | 14 |
ciliary epithelium | 7.52e-11 | 3 |
ciliary body | 7.52e-11 | 3 |
face | 2.34e-10 | 22 |
male genital duct | 3.30e-10 | 3 |
internal male genitalia | 3.30e-10 | 3 |
sense organ | 2.00e-09 | 24 |
sensory system | 2.00e-09 | 24 |
entire sense organ system | 2.00e-09 | 24 |
camera-type eye | 2.22e-09 | 20 |
simple eye | 2.22e-09 | 20 |
immature eye | 2.22e-09 | 20 |
ocular region | 2.22e-09 | 20 |
eyeball of camera-type eye | 2.22e-09 | 20 |
optic cup | 2.22e-09 | 20 |
optic vesicle | 2.22e-09 | 20 |
eye primordium | 2.22e-09 | 20 |
vasculature of eye | 3.18e-09 | 6 |
uvea | 3.18e-09 | 6 |
vasculature of head | 3.18e-09 | 6 |
eye | 7.34e-09 | 21 |
visual system | 7.34e-09 | 21 |
internal genitalia | 2.76e-08 | 25 |
cuboidal epithelium | 3.07e-08 | 4 |
transparent eye structure | 3.07e-08 | 4 |
simple cuboidal epithelium | 3.07e-08 | 4 |
cranial placode | 3.07e-08 | 4 |
lens of camera-type eye | 3.07e-08 | 4 |
epithelium of lens | 3.07e-08 | 4 |
lens placode | 3.07e-08 | 4 |
lens vesicle | 3.07e-08 | 4 |
duct of male reproductive system | 9.60e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
histiocytoma | 5.85e-07 | 2 |
malignant fibroxanthoma | 5.85e-07 | 2 |