FFCP PHASE1:Hg19::chr4:185395633..185395651,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3660 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6117 | |||
|TSSclassifier=strong | |||
|UniProt=D6RB34 | |||
|association_with_transcript=50bp_to_ENST00000504340,ENST00000512020_5end | |||
|cluster_id=chr4:185395633..185395651,- | |||
|coexpression_cluster_id=C4399 | |||
|description=CAGE_peak_2_at_IRF2_5end | |||
|id=chr4:185395633..185395651,- | |||
|ontology_enrichment_celltype=CL:0000738!4.07e-52!140;CL:0002087!3.19e-45!119;CL:0002031!1.55e-44!124;CL:0000037!1.24e-38!172;CL:0000566!1.24e-38!172;CL:0000988!1.01e-37!182;CL:0002032!1.17e-37!165;CL:0000837!1.17e-37!165;CL:0000766!3.06e-28!76;CL:0000839!3.15e-24!70;CL:0002057!1.04e-23!42;CL:0000557!1.95e-23!71;CL:0002194!6.23e-23!63;CL:0000576!6.23e-23!63;CL:0000040!6.23e-23!63;CL:0000559!6.23e-23!63;CL:0002009!2.21e-22!65;CL:0000860!5.49e-21!45;CL:0000542!5.34e-20!53;CL:0000051!5.34e-20!53;CL:0000838!1.10e-19!52;CL:0000763!1.06e-17!112;CL:0000049!1.06e-17!112;CL:0000945!3.50e-11!24;CL:0000826!3.50e-11!24;CL:0002320!1.63e-10!365;CL:0000134!5.55e-10!358;CL:0000084!6.06e-09!25;CL:0000827!6.06e-09!25;CL:0000791!2.84e-08!18;CL:0000789!2.84e-08!18;CL:0002420!2.84e-08!18;CL:0002419!2.84e-08!18;CL:0000790!2.84e-08!18;CL:0000236!3.15e-08!14 | |||
|ontology_enrichment_celltype_v019=CL:0000860;5.69e-23;33!CL:0002057;5.69e-23;33!CL:0000473;3.62e-21;39!CL:0000234;3.62e-21;39!CL:0000576;4.32e-19;48!CL:0002087;3.49e-17;104!CL:0000766;6.68e-17;69!CL:0000738;9.42e-15;136!CL:0000542;2.68e-14;53!CL:0000945;1.61e-13;24!CL:0000084;7.65e-11;25!CL:0000791;3.20e-10;18!CL:0000789;3.20e-10;18!CL:0002419;3.20e-10;18!CL:0000236;5.37e-09;13!CL:0000988;7.78e-09;177!CL:0000763;2.69e-07;100!CL:0000625;3.15e-07;11!CL:0000094;5.22e-07;8!CL:0000219;5.94e-07;193 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,7.67e-68,136;CL:0002087,3.09e-60,115;CL:0002031,2.12e-57,120;CL:0000037,1.37e-51,168;CL:0000988,1.91e-50,177;CL:0002032,6.77e-50,161;CL:0000837,6.77e-50,161;CL:0000766,2.04e-38,72;CL:0000839,4.85e-33,66;CL:0000473,5.03e-33,48;CL:0000234,5.03e-33,48;CL:0002194,3.28e-32,59;CL:0000576,3.28e-32,59;CL:0000040,3.28e-32,59;CL:0000559,3.28e-32,59;CL:0000557,6.54e-31,67;CL:0000860,1.79e-30,42;CL:0002057,1.79e-30,42;CL:0002009,2.54e-30,61;CL:0000542,1.35e-24,53;CL:0000051,1.35e-24,53;CL:0000763,3.27e-24,108;CL:0000049,3.27e-24,108;CL:0000838,3.47e-24,52;CL:0000945,1.76e-13,24;CL:0000826,1.76e-13,24;CL:0002320,7.20e-12,361;CL:0000134,1.44e-11,354;CL:0000084,8.53e-11,25;CL:0000827,8.53e-11,25;CL:0000791,2.57e-10,18;CL:0000789,2.57e-10,18;CL:0002420,2.57e-10,18;CL:0002419,2.57e-10,18;CL:0000790,2.57e-10,18;CL:0000236,1.43e-09,14;CL:0000219,2.00e-07,386;CL:0000625,2.89e-07,11;CL:0000094,5.27e-07,8 | |||
|ontology_enrichment_development_v019=CL:0002057;4.64e-22;42!CL:0000051;2.68e-14;53!CL:0000790;3.20e-10;18!CL:0000049;5.28e-08;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!2.20e-32!112;UBERON:0002390!1.03e-31!102;UBERON:0003061!1.03e-31!102;UBERON:0002405!3.03e-22!115;UBERON:0002371!1.05e-20!80;UBERON:0001474!5.31e-17!86;UBERON:0004765!3.87e-14!101;UBERON:0001434!3.87e-14!101;UBERON:0003081!9.68e-12!216;UBERON:0002384!1.00e-09!375;UBERON:0000178!2.37e-09!15;UBERON:0000179!2.37e-09!15;UBERON:0000463!2.37e-09!15;UBERON:0007023!4.97e-08!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;8.58e-12;15!UBERON:0000179;8.58e-12;15!UBERON:0000463;8.58e-12;15!UBERON:0002390;2.97e-08;32!UBERON:0002193;3.53e-07;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,9.41e-42,108;UBERON:0002390,1.53e-40,98;UBERON:0003061,1.53e-40,98;UBERON:0002405,2.70e-31,93;UBERON:0002371,4.05e-26,76;UBERON:0001474,2.66e-22,82;UBERON:0004765,3.61e-21,90;UBERON:0001434,7.15e-18,100;UBERON:0003081,5.51e-14,203;UBERON:0000178,1.01e-11,15;UBERON:0000179,1.01e-11,15;UBERON:0000463,1.01e-11,15;UBERON:0002384,5.24e-11,371;UBERON:0007023,5.01e-07,114 | |||
|phase1_expression=0.363356758541113,0,0.704772020479856,1.0007329835313,0.893922188854576,0,0,1.89515962028049,0,0.737201809504527,0,0,0,1.60896258848061,1.98838425436749,1.34465029290355,0.602694528023977,0.730310090387373,0.487932798790507,0.123121058076788,0.816002764977012,0,0.572471974262113,0.410623275218653,0.376627918784408,12.6846253541599,11.4119819335425,12.751146572816,6.29382842958246,4.98978217526377,4.33485145285013,0.919421224478927,0,0,0.232401601740905,2.41687695228617,1.17440175733939,4.43196326825502,1.60435557976113,3.03815219002193,10.9718582377563,11.3362783106643,11.5909005435384,15.8484080269726,12.4699061417307,11.886618998203,14.1781712512468,12.7462045286766,9.60089749774821,46.3184751638662,35.606338207545,31.6886188050704,18.2715210790408,12.9096936716765,6.77132432971709,14.8711448238658,10.3704337021981,10.7867272533641,22.038040250705,17.3301674621091,9.59005688698562,41.2314125233395,42.286295415786,29.4095077867559,18.2831820336008,7.94339314567596,9.9651559839292,37.6872997885115,35.4608384525737,20.415751402281,29.0591761264017,15.0993830754902,13.2914202725171,23.2380814943136,18.2839697969937,16.7726916406701,12.9177925818469,13.065389677211,20.5728750972263,11.6855224933912,18.3003343023163,14.6131323011707,28.1593991138116,33.31445528699,33.8013516468151,24.3236226862909,26.8265311314128,22.4153451582248,27.1028397841793,27.6675588815256,15.3687501659551,7.04684627245127,9.17455747500549,0,0,1.84368859342554,4.52432471261816,2.75107533924415,3.49522548299166,14.3780386035983,5.54067853277104,6.62826928028627,1.94826728407911,21.7250390926088,11.4896303915187,14.8427709371026,20.8518975099062,10.7596708569567,13.7862908413471,8.87964684859851,6.90875044464621,12.1717296008722,8.74890722656157,7.75868401460168,5.22677619024884,9.51798478659556,9.96373283364995,6.8725489096526,11.3858861408776,12.4240511586398,9.11516835398986,4.75226022224187,9.48623250189969,13.9505406158316,16.240994451805,11.1285308460688,5.74789597844733,5.44338206706778,2.67440195783507,3.91025890483557,2.43806866313962,0,0.767175371061182,1.0843174571537,3.00802746381534,1.30361867064741,0.795285947051099,1.45990461090791,0.378139268656271,0.665188192387692,0.351339142772504,2.29213382120997,1.09288586487763,0,4.86821090482025,5.22389211897802,3.0580330919339,2.8618874916641,2.28797964312051,1.11437250398869,0.39752481473341,0,0.347140501607594,0.56530794192401,0.838998872419812,0.825354125820202,0,2.06733407335463,0.71153252537342,1.00416183829401,2.01414658554573,0,0.976248230192678,0.735326160691737,0,1.25019619597712,0.44905874525234,0.900891843866578,0,0.949265659568129,0.366403487860815,26.3560834872127,31.022421131866,0,0.496971951695318,0.633152558322899,1.32409180813219,0.860509862246441,1.06400514659507,0.560677600142307,0,0.74000264525148,0.311211035399766,0.269421344139376,0.326923806226917,1.05950199351452,0,0,0.312160076830321,0,0.448346041655403,0.117434498643765,0.485618833104395,0,0.204154171254893,0.245668634623536,1.03325781175765,2.37600571456411,0.741800787835671,0,0,0.168336113954066,0,0.277064115484183,0.438977620880838,0.30648779579902,0.751190294532984,0.680593098960126,0.179389635688862,0.427114777637135,0.423863802319124,0,0.515262646192195,0,0.18611685633159,0.337552664482532,0.487185025805993,0.757301322732344,0.552299391853796,1.45481451136931,1.06502877754984,0.201504196455281,0.169560592310488,0.386521706326594,0.545492241181669,1.14721838155602,0.121973706129595,0,0.116193942869518,0.10366105501537,0,0,1.56449532329816,1.28648187638577,1.38134921352481,0.464367928031979,0.721879481669586,0.118306800039844,0.168584690078102,0,0,0.217879444092406,0,0,0,0,1.4763109092493,0,0.4115740113314,1.47008711385542,2.53510069643662,0.982827216677626,1.18157981336281,0,0.737930631258681,0.343135620597051,0.329250856225877,0,0.100528972411631,0.185176890317059,1.62904152655162,1.03993478527958,0,0.463721619900307,0.117408694235822,9.09508620894765,8.33373922637899,10.4639783729029,0,0,7.87894419479671,1.8720341211139,2.67536092119711,0,0.503946384596579,0.567100388969546,0.0895585227028483,0,0,2.95597942737566,4.31437326664808,0.829312462163088,2.01767934783746,2.77733353538036,0.190493682876507,0.763976851116555,0,0,0,0.300343057843917,0,0.448524337381443,0,0.51336800074665,0,0,0.845302752556,2.39344304926383,1.04007436911366,0.257207374262142,0,0.532844358032199,0.857867961948885,0.542621605391443,0,0,1.06617584622764,1.58390374586686,0.301439377059586,0.871533458600294,0.299918973546171,6.08118903205952,4.01805673145701,14.7583757638122,0.479249710983165,1.14861935834114,0,0.289562613335158,0.61642896765115,0.179060963239896,3.25046917581229,4.3346767244424,4.09692392233083,3.7219480521127,0.254094624222463,0,0,0.167516265334349,0,61.418575963669,23.932916736322,65.4776511228936,1.59498939234882,3.00102312635806,0.813795071099207,1.24782516918484,0.356857977594324,0.473107245101804,0.234282829985426,0.300946099727719,0,0,0.664225598535437,0,0.521301686808497,0.391602314925481,0.343143423810856,8.2707210449155,6.68714022537712,4.16237475433433,0,0,0,0,0,0,0.256278298511402,0,0.321707842287215,0,0.154209693802656,0.177561725313127,0.410635780069046,0,0.232420756919918,0.362578348774867,0.40101294060657,0.184161977871793,1.60740227430449,0.728364672026868,0.917870904715969,0.451199612907412,0.539107359730903,0.784349769176855,1.46139224653261,0.73886140225013,1.13733384070897,0.340187410553031,0.431831832204279,0,0.270946437543853,0,0.509752546090077,0,0.223874754722178,2.63111851975121,1.3071772551245,0.256450125116389,0.984043937099117,0.325378394664303,2.88514832613622,0.183138929636687,0.165018999841176,0,0,3.21367859688319,0.580024309752732,0.154048617114644,0.307007349452259,0.275673144969061,0.644521469209642,0.290033387828457,0.340906509664404,0.623224249527161,0.495854746082934,0.192190067365106,0.382838137483752,0.4046311234222,0.464845549297286,0,0,1.84820148105653,0,0,0.18532421910392,0.715624433709956,1.48863347743867,0.316379424718726,0.571890581771475,0.255897791311334,0.42793898803392,0.318203247925937,0,0.359744915166629,0,0.235624804691373,0.202182481573316,0,0.842516912477962,0,5.36169677188826,0,1.9109987597118,0.424216295861138,0,0.551365343546124,1.32687795048244,1.31535265576129,1.15755106853338,0,0.202910376962704,0.6196469961995,0.281695602532241,0,0.0982490410131212,0,0,1.89996871767898,1.97576935775941,0.75894634753143,0,0.288666338176536,0,0,3.01260162485693,0,0,0.443430153536676,0.459446800413919,34.5064374277875,24.468390628556,26.2037706100115,30.493667258597,26.3271854775164,37.6114520491776,39.4222949183824,25.3800056414167,0,0,0.490080431962063,3.90186667764009,0.721346064882224,0.426851060090485,0.318852545457645,0.199579371432817,0.957526850661834,2.32840940996271,0,1.40398589056729,0.912938716132769,0,0,0.677167111206413,0.963528450622197,0.80719882876419,0,0,0.307240764308458,0.671028323677248,0,0,0,0,0.270455678475983,0.33307196799782,1.4098700508785,0.37428108081644,4.68826173670061,0,13.3732061132974,0.284136146806413,0.23874448473769,0.890894042497916,0.614321404198464,0,0.844016498463076,1.8922479853894,4.94411622680279,0,2.98871982376605,9.94622095912132,0.251932747854276,2.0453736500431,13.7854982116398,0.622079175323615,0.359473404589307,0.537063524026827,3.06943422136123,2.66337195219721,14.3689855408164,0,0,0.371072392647405,0,0,0.174919999992391,0,0.1137934482855,1.01701460117107,0.236387681767936,0,0,0.347249989866585,0,1.20596438625408,1.52581736317083,1.10579259931225,0.295547618953547,0.658156191461918,0,0.278847488557207,1.76985594558733,1.02547850262301,0,0.359030577639089,0.108647371922008,0.638002319463839,0.641183153813036,1.5991043280559,1.02193298195737,0.470940769185074,0,0,0,0,0,0.794682894901893,0.421996129056054,0.979396848954886,0.282706142867882,0.216388639742091,0.995261931078505,4.5113357896703,2.4441205797345,7.41302821701555,8.7730396652017,8.14491206142552,1.7524294574976,0,0.468528891450678,3.46664099509765,0.19566461893209,0.485560759068186,0.789168805698781,4.83962864194656,0,5.37085926842148,0.450970258243478,0,0.664653872707185,0,0,0,0.569219092059585,0.277349346026277,0.347119476670262,3.03776431984571,0.435296032902013,2.09672001890436,0.343972064943233,0.0967563312890851,0.365446585430928,0.164230914106418,2.03676934625681,0.0882561266915003,0.677942222341597,0.274083849293502,0.397429223405979,0.759729551470544,0.782205530939212,1.92381168603681,3.20179492109029,2.39771531498556,0,0,0.171594997861965,0.14405479798815,0.124252535565433,0,0.135904206073614,0.523014231561666,1.12198039399954,0.577901179803038,1.20084057741958,1.23214841002794,1.27746588066972,0.429765441419957,7.62373327410012,1.67569440763353,1.83328339209347,2.87149209830726,1.39775300349294,1.28767814440971,1.56220020209311,0.671834724867263,0.720599767084807,0,0.315132729228895,0.164831716762333,0.202210631562555,0.295282444544246,5.08039992394707,0.795229689809303,0.681017030557878,0,0.137539436597234,0,0.449947783103001,0.77380195455795,0.789744236554321,0.335434687599266,1.02447419488958,1.41627387964495,1.37280437475228,0,0.191915197319445,2.1440859791201,1.32418394073086,0,0.542999601753713,1.72844298240254,0,0,0.082092520749339,0.851940108927109,1.24643300672138,2.4913879725274,2.65013777824443,0.646414781807753,1.05786081394152,0.171086837884329,0,6.30045734149399,6.4453765090863,4.55662960881915,12.4041505452988,8.4973001716116,10.9613338542806,1.27668251554036,0.544017803369474,0.7520696820681,1.22538230705385,0,0,0,0.366078794705889,0.500763722825999,1.14681839138014,0.998361463831671,1.4903136705932,0,0.249960815924213,0.758245587708239,0.570930667089935,1.6468607378872,0,0,0.149254802886874,0,0.554805861502613,0.568209015825267,0.50313580350515,0.889811221596536,0.686520205190771,0.151230923763239,0.15543720058278,0.591420599958536,0.159296767163702,1.79921244865442,0,0,0.265841714557995,1.04349012362347,0.450772826991655,0,0.406870733204662,0.727394636810238,0.751873899297419,0.464033759878494,1.19428766609585,0,0,1.34699795506368,1.26184898228651,0.770479321629213,1.07220795687463,0,1.13352962756136,0.231522474323834,0.244736704506468,0.537266523244462,0.308801447160972,0.657852148736121,0.176689145945881,0.192914038270915,1.01365464391844,0,0.345430341731199,0.911579868532147,1.38258436151731,37.608039606002,28.5659406673731,30.0960325430753,0.982829546539238,0.737318726261158,0.422624246717254,17.198916043524,0.213383459388282,8.7829639627016,0,0.368211900503681,0.139879507719444,1.86623178009892,0,0.862598491173454,0,0,0,0,0,0,0,3.78536376006016,0,0,2.4499638188256,0.449604575675217,1.41696576325585,0.478901577171454,0,0,0.276629009856872,0.322951291263702,0,0.392590874004102,0.11796972334774,1.28400018965175,0.462102664601353,1.1441462864015,0,0.198916222116275,3.30925444736732,0.20170506870352,0.781514011233092,0,0.655087670040387,1.18284868973636,0.540300676947157,0,0.413373593002368,0.634158101939068,0,0.548257766857182,1.48863353516788,0,3.44958554626907,0,1.3451348888753,0,1.13831095675649,1.1531308121143,11.1776967929106,1.71488009437418,1.22345519358297,0.460409414939944,0.236387681767936,0.111231401892069,2.35479278551542,0.314231179832004,0,0,0,10.0327854456281,2.21577286947635,0.316027223465453,0,0.173858272302579,1.60342272946051,0.207216164163037,0.6828739083758,0,0.430227358820278,0.473328002922261,0.511280428554946,2.11693525095465,0.4582137370881,0.62041277132864,0,0.335566295393377,0.98150233615243,0.609589624911347,0,1.33461648913121,0,0.971421986118279,0,0,0,0.11294608203896,0,2.71733118420012,6.01958433241968,6.1196676941108,1.41095188908457,1.96118657403124,0,0.588925401344836,1.48523200163543,1.2679671827502,0.339854229375634,15.9772660565751,12.1825408270061,15.7907026361388,0.178553938605658,0,2.00603416722921,0.730336388246517,2.75237570042724,1.43339583151451,0.157771562193185,0.407948941145488,0,5.81929524566941,0.371995018166751,0.462175628631418,0,0,0.109265571963696,0,0.101988829741982,0,0,0.250707539292375,0.985123076837112,0,3.31667775783512,0.827463966895162,1.91910583710883,0.476128862927481,3.93992349999637,5.21427600085206,0.33639558774184,3.24600507218641,0.404234377916439,1.30630048738177,1.02669990325584,13.1336503378446,5.59433202062876,1.99596213927608,0.89543595472072,1.3874554964103,0,0.0898252021065869,0,2.2003459952916,0.406896178315738,1.99727032255654,8.05095174364105,8.33478079988406 | |||
|short_description=p2@IRF2 | |||
}} |
Latest revision as of 01:33, 17 September 2015
Short description: | p2@IRF2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_IRF2_5end |
Coexpression cluster: | C4399_Neutrophils_CD14_Whole_Eosinophils_CD19_migratory_spleen |
Association with transcript: | 50bp_to_ENST00000504340, ENST00000512020_5end |
EntrezGene: | IRF2 |
HGNC: | 6117 |
UniProt: | D6RB34 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 9.41e-42 | 108 |
hematopoietic system | 1.53e-40 | 98 |
blood island | 1.53e-40 | 98 |
immune system | 2.70e-31 | 93 |
bone marrow | 4.05e-26 | 76 |
bone element | 2.66e-22 | 82 |
skeletal element | 3.61e-21 | 90 |
skeletal system | 7.15e-18 | 100 |
lateral plate mesoderm | 5.51e-14 | 203 |
blood | 1.01e-11 | 15 |
haemolymphatic fluid | 1.01e-11 | 15 |
organism substance | 1.01e-11 | 15 |
connective tissue | 5.24e-11 | 371 |
adult organism | 5.01e-07 | 114 |