FFCP PHASE1:Hg19::chr4:24202276..24202277,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr4:24202276..24202277,- | |||
|coexpression_cluster_id=C449 | |||
|description=CAGE_peak_at_chr4:24202276..24202277,- | |||
|id=chr4:24202276..24202277,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;9.90e-11;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1749;4.04e-09;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,3.72e-09,14 | |||
|ontology_enrichment_uberon=UBERON:0001049!1.05e-53!57;UBERON:0005068!1.05e-53!57;UBERON:0006241!1.05e-53!57;UBERON:0007135!1.05e-53!57;UBERON:0002616!2.23e-48!59;UBERON:0002020!1.67e-44!34;UBERON:0003528!1.67e-44!34;UBERON:0007023!4.45e-44!115;UBERON:0001869!2.48e-43!32;UBERON:0002780!7.17e-43!41;UBERON:0001890!7.17e-43!41;UBERON:0006240!7.17e-43!41;UBERON:0000955!3.97e-42!69;UBERON:0006238!3.97e-42!69;UBERON:0003080!1.03e-41!42;UBERON:0001893!1.66e-40!34;UBERON:0001017!6.63e-39!82;UBERON:0002791!7.51e-38!33;UBERON:0005743!1.03e-36!86;UBERON:0003075!5.10e-35!86;UBERON:0007284!5.10e-35!86;UBERON:0002619!3.70e-33!22;UBERON:0002346!4.42e-33!90;UBERON:0000073!1.91e-32!94;UBERON:0001016!1.91e-32!94;UBERON:0001950!3.57e-32!20;UBERON:0000956!7.61e-29!25;UBERON:0000203!7.61e-29!25;UBERON:0003056!7.99e-27!61;UBERON:0000153!2.67e-23!129;UBERON:0007811!2.67e-23!129;UBERON:0000033!9.68e-22!123;UBERON:0000200!4.18e-20!6;UBERON:0000025!5.88e-18!194;UBERON:0002308!1.63e-17!9;UBERON:0000125!1.63e-17!9;UBERON:0004121!2.28e-14!169;UBERON:0000369!6.29e-14!4;UBERON:0002435!6.29e-14!4;UBERON:0000204!6.29e-14!4;UBERON:0010082!6.29e-14!4;UBERON:0000924!7.63e-14!173;UBERON:0006601!7.63e-14!173;UBERON:0004111!1.88e-13!241;UBERON:0002420!4.93e-13!9;UBERON:0007245!4.93e-13!9;UBERON:0010009!4.93e-13!9;UBERON:0010011!4.93e-13!9;UBERON:0000454!4.93e-13!9;UBERON:0000477!6.11e-13!286;UBERON:0003076!9.49e-13!15;UBERON:0003057!9.49e-13!15;UBERON:0004733!1.16e-12!12;UBERON:0002028!1.16e-12!12;UBERON:0007277!1.16e-12!12;UBERON:0000064!5.69e-12!219;UBERON:0009663!6.64e-12!7;UBERON:0004732!1.33e-11!13;UBERON:0005383!4.40e-11!3;UBERON:0005382!4.40e-11!3;UBERON:0002021!9.17e-11!5;UBERON:0002771!1.18e-10!3;UBERON:0000988!1.30e-10!3;UBERON:0000483!2.54e-10!309;UBERON:0000119!4.02e-10!312;UBERON:0001871!4.27e-10!7;UBERON:0002298!5.49e-10!8;UBERON:0002680!3.12e-09!9;UBERON:0001895!3.12e-09!9;UBERON:0010092!3.12e-09!9;UBERON:0000481!4.43e-08!347;UBERON:0001870!6.19e-08!2;UBERON:0001873!7.82e-08!2;UBERON:0010122!7.82e-08!2;UBERON:0002148!9.87e-08!2;UBERON:0009662!9.87e-08!2;UBERON:0001897!2.31e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0000997;7.48e-30;1!UBERON:0005056;7.48e-30;1!UBERON:0004176;7.48e-30;1!UBERON:0001874;2.37e-29;1!UBERON:0002771;2.05e-15;2!UBERON:0005383;9.90e-11;3!UBERON:0005382;9.90e-11;3!UBERON:0001052;2.26e-08;4!UBERON:0000369;2.26e-08;4!UBERON:0002435;2.26e-08;4!UBERON:0000204;2.26e-08;4!UBERON:0003528;2.10e-07;34!UBERON:0002020;2.10e-07;34!UBERON:0002021;5.08e-07;5!UBERON:0004907;6.04e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000997,7.48e-30,1;UBERON:0005056,7.48e-30,1;UBERON:0001874,4.20e-29,1;UBERON:0002771,2.05e-15,2;UBERON:0005383,1.20e-10,3;UBERON:0005382,1.20e-10,3;UBERON:0000073,7.58e-09,53;UBERON:0002616,7.58e-09,53;UBERON:0002791,2.06e-08,32;UBERON:0001869,2.06e-08,32;UBERON:0001049,2.10e-08,56;UBERON:0005068,2.10e-08,56;UBERON:0006241,2.10e-08,56;UBERON:0007135,2.10e-08,56;UBERON:0001052,2.11e-08,4;UBERON:0000369,2.61e-08,4;UBERON:0002435,2.61e-08,4;UBERON:0000204,2.61e-08,4;UBERON:0010082,2.61e-08,4;UBERON:0003528,5.73e-08,34;UBERON:0002020,5.73e-08,34;UBERON:0001893,5.73e-08,34;UBERON:0002021,5.08e-07,5;UBERON:0004907,5.70e-07,5;UBERON:0000955,6.43e-07,68;UBERON:0006238,6.43e-07,68;UBERON:0002780,9.61e-07,41;UBERON:0001890,9.61e-07,41;UBERON:0003080,9.61e-07,41;UBERON:0006240,9.61e-07,41 | |||
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|short_description=p@chr4:24202276..24202277,- | |||
}} |
Latest revision as of 04:28, 30 July 2015
Short description: | p@chr4:24202276..24202277, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:24202276..24202277, - |
Coexpression cluster: | C449_epidermoid_anaplastic_occipital_oral_middle_Wilms_parietal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mammalian vulva | 7.48e-30 | 1 |
external female genitalia | 7.48e-30 | 1 |
putamen | 4.20e-29 | 1 |
middle temporal gyrus | 2.05e-15 | 2 |
caudate-putamen | 1.20e-10 | 3 |
dorsal striatum | 1.20e-10 | 3 |
regional part of nervous system | 7.58e-09 | 53 |
regional part of brain | 7.58e-09 | 53 |
regional part of telencephalon | 2.06e-08 | 32 |
cerebral hemisphere | 2.06e-08 | 32 |
neural tube | 2.10e-08 | 56 |
neural rod | 2.10e-08 | 56 |
future spinal cord | 2.10e-08 | 56 |
neural keel | 2.10e-08 | 56 |
rectum | 2.11e-08 | 4 |
corpus striatum | 2.61e-08 | 4 |
striatum | 2.61e-08 | 4 |
ventral part of telencephalon | 2.61e-08 | 4 |
future corpus striatum | 2.61e-08 | 4 |
brain grey matter | 5.73e-08 | 34 |
gray matter | 5.73e-08 | 34 |
telencephalon | 5.73e-08 | 34 |
occipital lobe | 5.08e-07 | 5 |
lower digestive tract | 5.70e-07 | 5 |
brain | 6.43e-07 | 68 |
future brain | 6.43e-07 | 68 |
regional part of forebrain | 9.61e-07 | 41 |
forebrain | 9.61e-07 | 41 |
anterior neural tube | 9.61e-07 | 41 |
future forebrain | 9.61e-07 | 41 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 3.72e-09 | 14 |