FFCP PHASE1:Hg19::chr5:59744572..59744583,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5144 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8783 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-38bp_to_ENST00000506024_5end | |||
|cluster_id=chr5:59744572..59744583,- | |||
|coexpression_cluster_id=C137 | |||
|description=CAGE_peak_57_at_PDE4D_5end | |||
|id=chr5:59744572..59744583,- | |||
|ontology_enrichment_celltype=CL:0002150!1.33e-11!3;CL:0000861!1.33e-11!3;CL:0002367!6.68e-09!2 | |||
|ontology_enrichment_celltype_v019=CL:0002367;3.70e-11;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002367,4.52e-11,2 | |||
|ontology_enrichment_development_v019=UBERON:0005425;6.31e-21;1!UBERON:0006603;2.55e-10;65!UBERON:0003056;7.26e-08;3!UBERON:0009847;7.26e-08;3!UBERON:0003353;7.26e-08;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4960;6.31e-21;1!DOID:0070004;6.31e-21;1!DOID:154;3.70e-11;2!DOID:4236;3.70e-11;2!DOID:4556;4.52e-08;3 | |||
|ontology_enrichment_disease_v019_2=DOID:4960,4.22e-21,1;DOID:0070004,4.22e-21,1;DOID:154,4.09e-11,2;DOID:4236,4.09e-11,2;DOID:4556,4.52e-08,3 | |||
|ontology_enrichment_uberon=UBERON:0007023!3.81e-15!115;UBERON:0002780!1.50e-11!41;UBERON:0001890!1.50e-11!41;UBERON:0006240!1.50e-11!41;UBERON:0003080!3.23e-11!42;UBERON:0001893!5.04e-10!34;UBERON:0003056!1.08e-09!61;UBERON:0001049!5.14e-09!57;UBERON:0005068!5.14e-09!57;UBERON:0006241!5.14e-09!57;UBERON:0007135!5.14e-09!57;UBERON:0005969!6.68e-09!2;UBERON:0003956!6.68e-09!2;UBERON:0003127!9.09e-09!2;UBERON:0002616!1.29e-08!59;UBERON:0002791!1.45e-08!33;UBERON:0005162!1.94e-08!2;UBERON:0000122!1.94e-08!2;UBERON:0003075!4.67e-08!86;UBERON:0007284!4.67e-08!86;UBERON:0000955!5.85e-08!69;UBERON:0006238!5.85e-08!69;UBERON:0000073!7.64e-08!94;UBERON:0001016!7.64e-08!94;UBERON:0002346!1.53e-07!90;UBERON:0001017!3.01e-07!82;UBERON:0001869!4.29e-07!32;UBERON:0001046!9.05e-07!19;UBERON:0005743!9.10e-07!86;UBERON:0000162!9.27e-07!14;UBERON:0001353!9.27e-07!14;UBERON:0000163!9.27e-07!14;UBERON:0006866!9.27e-07!14;UBERON:0000164!9.27e-07!14;UBERON:0000931!9.27e-07!14 | |||
|ontology_enrichment_uberon_v019=UBERON:0000996;3.12e-21;1!UBERON:0000941;6.31e-21;1!UBERON:0001785;6.31e-21;1!UBERON:0002464;6.31e-21;1!UBERON:0004904;6.31e-21;1!UBERON:0001021;6.31e-21;1!UBERON:0001255;2.60e-11;2!UBERON:0001556;2.60e-11;2!UBERON:0003714;3.70e-11;2!UBERON:0005162;3.70e-11;2!UBERON:0000122;3.70e-11;2!UBERON:0005969;3.70e-11;2!UBERON:0003956;3.70e-11;2!UBERON:0000077;3.02e-07;27 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000996,2.82e-21,1;UBERON:0000941,5.16e-21,1;UBERON:0001785,5.16e-21,1;UBERON:0002464,5.16e-21,1;UBERON:0004904,5.16e-21,1;UBERON:0001021,5.16e-21,1;UBERON:0003902,5.16e-21,1;UBERON:0005425,5.16e-21,1;UBERON:0000162,2.07e-13,14;UBERON:0001353,2.07e-13,14;UBERON:0000163,2.07e-13,14;UBERON:0006866,2.07e-13,14;UBERON:0000164,2.07e-13,14;UBERON:0000931,2.07e-13,14;UBERON:0004122,1.46e-12,15;UBERON:0001255,2.73e-11,2;UBERON:0001556,2.73e-11,2;UBERON:0003714,3.35e-11,2;UBERON:0005162,3.35e-11,2;UBERON:0000122,3.35e-11,2;UBERON:0005969,4.52e-11,2;UBERON:0003956,4.52e-11,2;UBERON:0001046,4.72e-10,19;UBERON:0003064,5.25e-07,28;UBERON:0000077,8.77e-07,29 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0.286836620748814,0,0,0,0,0,0,0,0,0,0.70296429550139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234004265139238,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229628896329213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0.62962469366128,0,0.308033580176089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.379473173765715,1.04980416073495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0,0.276283915531148,0,0,0,0,0,0,0,2.36744173528641,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,1.21537496453305,0,0,0,0,0,0,3.37709236908869,0.139423744278603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123563938946503,0,0.067401132980677,0,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290268993867255,0.219267951258557,0.0821154570532092,0.0969890164884194,0,0.225980740780532,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0.157611414598396,0.0524545881349981,0,13.2672631106305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.705797459094515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0,1.72214979660816,0,0,0,0,0.639471856518258,0,0,0,0,0,0,0,0,0,0,0,0,0.128458450192919,0,0.159633859057151,0,0,0,0,1.42769420259154,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0.126831620387814,0,0,0,0,0,0,0.672567444437648,0,0.227662191351298,0,0,0,0.339848664884159,0.0657727735628491,0,0,1.41287567130925,0,0,0,0,0,0,0,0,0,0,0.414432328326074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,3.18692818280077,0,0,0,0,0,0,0,0,0,0,0,0,0,0.430018749454354,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0,0.286888821570705,0.665320713092027,0,0,0,0,0,0,0,2.66302709674205,0,0 | |||
|short_description=p57@PDE4D | |||
}} |
Latest revision as of 08:14, 18 September 2015
Short description: | p57@PDE4D |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_57_at_PDE4D_5end |
Coexpression cluster: | C137_large_ductal_melanoma_cervical_Endothelial_Smooth_chronic |
Association with transcript: | -38bp_to_ENST00000506024_5end |
EntrezGene: | PDE4D |
HGNC: | 8783 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
trabecular meshwork cell | 4.52e-11 | 2 |
Ontology term | p-value | n |
---|---|---|
vagina | 2.82e-21 | 1 |
cranial nerve II | 5.16e-21 | 1 |
cranial nerve | 5.16e-21 | 1 |
nerve trunk | 5.16e-21 | 1 |
nerve connecting eye with brain | 5.16e-21 | 1 |
nerve | 5.16e-21 | 1 |
retinal neural layer | 5.16e-21 | 1 |
presumptive neural retina | 5.16e-21 | 1 |
cloaca | 2.07e-13 | 14 |
anal region | 2.07e-13 | 14 |
embryonic cloaca | 2.07e-13 | 14 |
terminal part of digestive tract | 2.07e-13 | 14 |
primitive urogenital sinus | 2.07e-13 | 14 |
proctodeum | 2.07e-13 | 14 |
genitourinary system | 1.46e-12 | 15 |
urinary bladder | 2.73e-11 | 2 |
lower urinary tract | 2.73e-11 | 2 |
neural tissue | 3.35e-11 | 2 |
multi cell component structure | 3.35e-11 | 2 |
neuron projection bundle | 3.35e-11 | 2 |
reticulum trabeculare | 4.52e-11 | 2 |
aqueous drainage system | 4.52e-11 | 2 |
hindgut | 4.72e-10 | 19 |
intermediate mesoderm | 5.25e-07 | 28 |
mixed endoderm/mesoderm-derived structure | 8.77e-07 | 29 |
Ontology term | p-value | n |
---|---|---|
bone marrow cancer | 4.22e-21 | 1 |
myeloma | 4.22e-21 | 1 |
mixed cell type cancer | 4.09e-11 | 2 |
carcinosarcoma | 4.09e-11 | 2 |
lung large cell carcinoma | 4.52e-08 | 3 |