FFCP PHASE1:Hg19::chr5:68788365..68788387,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=100506658 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8104 | |||
|TSSclassifier=strong | |||
|UniProt=A8K3T2,Q16625 | |||
|association_with_transcript=-202bp_to_NM_001205254_5end | |||
|cluster_id=chr5:68788365..68788387,+ | |||
|coexpression_cluster_id=C4514 | |||
|description=CAGE_peak_2_at_OCLN_5end | |||
|id=chr5:68788365..68788387,+ | |||
|ontology_enrichment_celltype=CL:0000066!1.24e-26!254;CL:0000223!4.55e-19!59;CL:0002076!1.64e-14!43;CL:0002251!1.74e-08!21 | |||
|ontology_enrichment_celltype_v019=CL:0002076;1.62e-11;42!CL:0002251;5.57e-07;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0000223,2.34e-16,58;CL:0000066,3.02e-16,253;CL:0002076,5.66e-14,42;CL:0002251,5.42e-07,20 | |||
|ontology_enrichment_development_v019=UBERON:0001041;9.25e-09;30!CL:0000223;1.66e-08;58!UBERON:0006595;6.78e-08;86 | |||
|ontology_enrichment_disease=DOID:305!5.75e-26!106;DOID:0050687!9.87e-18!143;DOID:299!4.36e-10!25;DOID:1749!5.69e-10!14;DOID:162!1.14e-07!235;DOID:14566!1.39e-07!239 | |||
|ontology_enrichment_disease_v019=DOID:299;3.65e-11;25!DOID:1749;5.59e-08;14!DOID:305;7.08e-07;106 | |||
|ontology_enrichment_disease_v019_2=DOID:305,1.76e-18,106;DOID:0050687,1.35e-12,143;DOID:299,2.26e-11,25;DOID:1749,5.07e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0004119!2.57e-25!169;UBERON:0000925!2.57e-25!169;UBERON:0006595!2.57e-25!169;UBERON:0001007!7.52e-22!155;UBERON:0001555!7.52e-22!155;UBERON:0007026!7.52e-22!155;UBERON:0004921!5.83e-20!129;UBERON:0004185!5.83e-20!129;UBERON:0000466!7.81e-17!126;UBERON:0000077!1.49e-16!130;UBERON:0005911!2.29e-16!82;UBERON:0005177!6.78e-15!107;UBERON:0001041!2.64e-13!98;UBERON:0000464!5.01e-13!104;UBERON:0000062!3.34e-11!511;UBERON:0009569!4.54e-11!113;UBERON:0005153!1.25e-09!37;UBERON:0007023!3.61e-09!115;UBERON:0005409!5.73e-09!35;UBERON:0000481!6.42e-09!347;UBERON:0001004!8.84e-09!72;UBERON:0005157!1.09e-08!51;UBERON:0002048!1.35e-08!22;UBERON:0000117!1.35e-08!22;UBERON:0000171!1.35e-08!22;UBERON:0000170!1.35e-08!22;UBERON:0005597!1.35e-08!22;UBERON:0000118!1.35e-08!22;UBERON:0005172!1.73e-08!55;UBERON:0005173!1.73e-08!55;UBERON:0000064!3.13e-08!219;UBERON:0003929!4.78e-08!54;UBERON:0000922!8.54e-08!612;UBERON:0005178!1.79e-07!34;UBERON:0002224!1.79e-07!34;UBERON:0005181!4.64e-07!35;UBERON:0002530!4.96e-07!59;UBERON:0000161!5.16e-07!35;UBERON:0002553!5.21e-07!70;UBERON:0000058!6.12e-07!26;UBERON:0000065!6.99e-07!53 | |||
|ontology_enrichment_uberon_v019=UBERON:0005409;3.90e-12;22!UBERON:0004921;9.40e-12;33!UBERON:0000160;2.79e-10;17!UBERON:0000058;3.58e-07;10!UBERON:0001007;8.98e-07;81 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,1.60e-20,160;UBERON:0000925,1.60e-20,160;UBERON:0006595,1.60e-20,160;UBERON:0001007,2.77e-19,145;UBERON:0001555,2.77e-19,145;UBERON:0007026,2.77e-19,145;UBERON:0004921,3.20e-18,118;UBERON:0005911,1.16e-12,82;UBERON:0005177,8.95e-12,101;UBERON:0005409,9.25e-12,25;UBERON:0000160,2.97e-10,17;UBERON:0001041,7.50e-10,87;UBERON:0009569,7.14e-09,112;UBERON:0003929,2.23e-08,54;UBERON:0005153,4.17e-07,37;UBERON:0001004,7.15e-07,74 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.982935746006035,2.79120467188971,0,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787107813136792,0,0,0,3.67768489791571,0.6024118375565,0.739508020333575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0.087834785693126,1.37528029272598,0.364295288292542,1.85392221392215,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0.872188104285069,0,0,0,0,0,0.560677600142307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.35282597214308,2.72746120590835,1.14721838155602,0.609868530647977,0.795178609928912,0.464775771478074,0.932949495138334,0.756962552626885,2.18986415445498,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,21.5483559197112,9.82827216677626,1.18157981336281,0,26.9344680409419,0.171567810298526,0.548751427043128,2.24803506515239,0.301586917234893,0.0925884451585296,0,0,0,0,0,0,0,0,1.58040879591855,0.858486162094873,0,0,0,0,0.16798212819886,0.992425680696705,0.0895585227028483,1.16253575405585,0.383382679165211,0,0,0,0,0,0,0,0,3.4214489204541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.909382714338778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.1074311989528,0,23.7568951454613,0,0,0,0.902399225814824,3.23464415838542,0.784349769176855,1.46139224653261,2.00548094896464,0,0,0,0,0,0,4.33289664176565,9.97291210714469,0.671624264166535,0,0,0,0,0,4.43076350085206,0,0,0,0.650060246036521,0,0,0.154048617114644,0,0,0,0,0,0,5.12383237619032,2.69066094311149,1.02090169995667,11.7343025792438,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.50177493086331,0,0,4.14232723417828,0,1.68471475667626,0.886860307073351,0.689170200620878,0,0,0,0,0,0,0,0,0.106824071127473,0,0.735120647943095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.851692475380653,0,0,0,0,0,0,0,0,0,0,2.43282702530686,0,0.242721043499027,0,0.284136146806413,13.6084356300483,1.18785872333055,6.75753544618311,0,0.422008249231538,0.111308705022906,0,0.422250816255987,0.398495976502139,0.828851746593443,1.51159648712566,0.102268682502155,0,0,9.88551862620595,14.8587574980756,0,1.57829449019094,0,0,0.969332746095218,0,0,5.98983850496036,1.74919999992391,1.44999915086959,0.568967241427498,4.32231205497703,1.41832609060762,0,0,0,0,0.241192877250816,0,0,0,0.219385397153973,0,19.5193241990045,1.30815439456455,0.227884111694002,0.46112780877612,1.79515288819544,8.90908449760466,2.55200927785536,0.274792780205587,0,0,0,0,0,0,0,0,0,0.421996129056054,1.79556088975062,10.7428334289795,0,11.9431431729421,4.42287822516696,18.3309043480088,0,0,0,0.404406797884062,0,0,0,3.52196314077761,1.21390189767046,1.97292201424695,6.04953580243319,0,0.063186579628488,0.150323419414493,0.933193722575224,0,0,0,0,1.99226682220855,0,6.94238953340524,5.09560466554764,3.91766429611812,1.39781334593624,0.51595809741485,0,0.0730893170861856,0,4.55848377495571,0,0.90392296312213,0,0.19871461170299,0.189932387867636,8.79981222306614,0.961905843018405,6.61704283691993,0.39961921916426,1.58499458869517,0.229073192331831,1.02956998717179,1.4405479798815,0.372757606696298,3.06402245001834,0.135904206073614,0,0,0.288950589901519,0.600420288709789,0.136905378891993,0,0,0,0,0,0,4.99197501247478,0,0,0.0671834724867263,0,4.65983798109815,0.236349546921671,0.576911008668165,0.26961417541674,0.393709926058995,0.169346664131569,0,0,1.92903778158023,1.10031549277787,0.83088067605837,1.349843349309,42.5591075006872,0.242998226632099,2.0126081255956,4.09789677955831,3.61936658131487,0.105600336519406,0,12.0906574311251,0,0,0,0,0,0,0,0,0,0,7.03450721654796,3.97520666736664,0.258565912723101,0.13223260174269,1.19760786519031,5.63852017853338,5.23258321581704,4.71612915298998,4.97086866416635,0,0,0,8.93677760878255,0,0,0,0,0,0.886068179966986,0.122026264901963,0,0,0.110929051536852,0.620964029413834,0,0,0,0,0.235265819698172,0.468334905806882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0.770479321629213,0.214441591374926,2.08795433572169,0.226705925512272,0,0.489473409012935,0,0,0.219284049578707,0,0.771656153083659,0,0,0,0.303859956177382,0.276516872303462,0.389720617678777,0,0.654261577023377,0,0,10.9882304146486,0,0,0,0.567515953566836,0,33.7109613603861,4.97661808026378,0,0,0,0,0,0,0,0,0,0,0,0,0,0.385375350578757,0,0,0.205116364240755,0,0.0691572524642179,0.161475645631851,0,0.196295437002051,0.825788063434183,1.46742878817343,1.38630799380406,0,0,0,0.150420656698515,0,8.59665412356402,2.61906694481422,0,6.50566779354999,0.270150338473579,0.781078098613847,0.206686796501184,0.253663240775627,0,0.548257766857182,0.496211178389294,0,2.29972369751271,0,0,0,0.227662191351298,0.79832133146375,0,0,0.203909198930495,0,0.590969204419841,3.67063626243828,0.78493092850514,0,9.52925355266883,6.39211104356647,0,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| |||
|short_description=p2@OCLN | |||
}} |
Latest revision as of 13:15, 18 September 2015
Short description: | p2@OCLN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_OCLN_5end |
Coexpression cluster: | C4514_nasal_immature_Prostate_cervical_amniotic_Intestinal_colon |
Association with transcript: | -202bp_to_NM_001205254_5end |
EntrezGene: | OCLN |
HGNC: | 8104 |
UniProt: | A8K3T2Q16625 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endodermal cell | 2.34e-16 | 58 |
epithelial cell | 3.02e-16 | 253 |
endo-epithelial cell | 5.66e-14 | 42 |
epithelial cell of alimentary canal | 5.42e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 1.60e-20 | 160 |
endoderm | 1.60e-20 | 160 |
presumptive endoderm | 1.60e-20 | 160 |
digestive system | 2.77e-19 | 145 |
digestive tract | 2.77e-19 | 145 |
primitive gut | 2.77e-19 | 145 |
subdivision of digestive tract | 3.20e-18 | 118 |
endo-epithelium | 1.16e-12 | 82 |
trunk region element | 8.95e-12 | 101 |
gastrointestinal system | 9.25e-12 | 25 |
intestine | 2.97e-10 | 17 |
foregut | 7.50e-10 | 87 |
subdivision of trunk | 7.14e-09 | 112 |
gut epithelium | 2.23e-08 | 54 |
epithelial bud | 4.17e-07 | 37 |
respiratory system | 7.15e-07 | 74 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.76e-18 | 106 |
cell type cancer | 1.35e-12 | 143 |
adenocarcinoma | 2.26e-11 | 25 |
squamous cell carcinoma | 5.07e-08 | 14 |