FFCP PHASE1:Hg19::chr6:12716949..12716960,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=221692 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=20990 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=61bp_to_uc010jpc.2,uc011dir.1_5end | |||
|cluster_id=chr6:12716949..12716960,+ | |||
|coexpression_cluster_id=C35 | |||
|description=CAGE_peak_12_at_PHACTR1_5end | |||
|id=chr6:12716949..12716960,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0010122;3.29e-17;2!UBERON:0006601;1.73e-16;82!UBERON:0006222;3.05e-09;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001893!1.89e-128!34;UBERON:0001869!9.32e-128!32;UBERON:0002791!2.27e-123!33;UBERON:0002780!2.85e-121!41;UBERON:0001890!2.85e-121!41;UBERON:0006240!2.85e-121!41;UBERON:0002020!1.23e-119!34;UBERON:0003528!1.23e-119!34;UBERON:0003080!2.63e-118!42;UBERON:0002619!2.97e-104!22;UBERON:0001049!2.81e-97!57;UBERON:0005068!2.81e-97!57;UBERON:0006241!2.81e-97!57;UBERON:0007135!2.81e-97!57;UBERON:0001950!1.20e-94!20;UBERON:0002616!8.08e-94!59;UBERON:0000956!1.15e-91!25;UBERON:0000203!1.15e-91!25;UBERON:0000955!3.18e-83!69;UBERON:0006238!3.18e-83!69;UBERON:0003056!4.12e-80!61;UBERON:0001017!1.16e-73!82;UBERON:0005743!5.18e-70!86;UBERON:0003075!9.81e-67!86;UBERON:0007284!9.81e-67!86;UBERON:0002346!1.64e-63!90;UBERON:0000073!6.74e-63!94;UBERON:0001016!6.74e-63!94;UBERON:0007023!5.41e-49!115;UBERON:0000033!2.80e-47!123;UBERON:0000153!8.36e-45!129;UBERON:0007811!8.36e-45!129;UBERON:0002420!1.39e-37!9;UBERON:0007245!1.39e-37!9;UBERON:0010009!1.39e-37!9;UBERON:0010011!1.39e-37!9;UBERON:0000454!1.39e-37!9;UBERON:0004121!1.60e-32!169;UBERON:0000924!1.26e-31!173;UBERON:0006601!1.26e-31!173;UBERON:0001871!5.61e-31!7;UBERON:0000200!7.92e-31!6;UBERON:0002308!1.92e-28!9;UBERON:0000125!1.92e-28!9;UBERON:0009663!1.01e-27!7;UBERON:0000349!2.81e-26!5;UBERON:0001872!5.54e-26!5;UBERON:0002021!7.57e-26!5;UBERON:0000025!2.90e-24!194;UBERON:0000369!1.10e-22!4;UBERON:0002435!1.10e-22!4;UBERON:0000204!1.10e-22!4;UBERON:0010082!1.10e-22!4;UBERON:0004111!1.31e-19!241;UBERON:0005383!1.70e-17!3;UBERON:0005382!1.70e-17!3;UBERON:0000477!1.13e-16!286;UBERON:0000064!2.01e-16!219;UBERON:0002771!4.79e-16!3;UBERON:0000483!8.14e-14!309;UBERON:0000119!1.29e-13!312;UBERON:0001873!3.17e-12!2;UBERON:0010122!3.17e-12!2;UBERON:0001876!9.31e-12!2;UBERON:0001870!1.28e-11!2;UBERON:0001875!1.58e-11!2;UBERON:0006514!1.58e-11!2;UBERON:0000475!1.62e-11!365;UBERON:0001954!4.26e-11!2;UBERON:0003022!4.26e-11!2;UBERON:0002421!4.26e-11!2;UBERON:0002600!4.26e-11!2;UBERON:0000481!6.23e-08!347;UBERON:0000062!1.55e-07!511;UBERON:0000988!2.41e-07!3;UBERON:0001874!5.58e-07!1;UBERON:0001882!6.59e-07!1;UBERON:0005403!6.59e-07!1;UBERON:0002022!8.21e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;1.53e-92;32!UBERON:0002791;4.77e-85;32!UBERON:0001893;4.34e-84;34!UBERON:0003528;7.48e-77;34!UBERON:0002020;7.48e-77;34!UBERON:0002619;5.83e-72;22!UBERON:0002780;5.30e-69;41!UBERON:0001890;5.30e-69;41!UBERON:0001950;6.51e-69;20!UBERON:0000956;2.32e-63;25!UBERON:0000203;2.32e-63;25!UBERON:0002420;1.82e-42;9!UBERON:0007245;1.82e-42;9!UBERON:0010009;1.82e-42;9!UBERON:0010011;1.82e-42;9!UBERON:0000454;1.82e-42;9!UBERON:0000073;2.97e-38;53!UBERON:0002616;2.97e-38;53!UBERON:0000369;1.34e-32;4!UBERON:0002435;1.34e-32;4!UBERON:0000204;1.34e-32;4!UBERON:0000955;2.35e-29;68!UBERON:0009663;1.10e-28;7!UBERON:0001017;1.75e-28;75!UBERON:0005383;5.85e-25;3!UBERON:0005382;5.85e-25;3!UBERON:0000349;6.48e-25;5!UBERON:0001872;1.36e-24;5!UBERON:0000125;2.71e-22;9!UBERON:0002308;2.71e-22;9!UBERON:0000200;1.06e-20;6!UBERON:0001016;1.79e-20;83!UBERON:0001871;6.36e-18;6!UBERON:0001873;3.29e-17;2!UBERON:0001876;2.11e-16;2!UBERON:0002021;1.39e-14;5!UBERON:0007023;1.83e-14;114!UBERON:0001870;3.60e-11;3!UBERON:0001874;1.60e-09;1!UBERON:0001882;2.04e-09;1!UBERON:0005403;2.04e-09;1!UBERON:0002022;3.05e-09;1!UBERON:0002581;5.31e-09;1!UBERON:0002902;5.31e-09;1!UBERON:0009899;5.31e-09;1!UBERON:0007190;5.31e-09;1!UBERON:0003112;8.82e-09;1!UBERON:0011158;8.82e-09;1!UBERON:0003128;8.82e-09;1!UBERON:0001703;8.82e-09;1!UBERON:0002241;8.82e-09;1!UBERON:0011216;8.90e-09;132!UBERON:0010314;7.78e-08;132 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001869,9.28e-100,32;UBERON:0001893,7.25e-94,34;UBERON:0002780,1.88e-93,41;UBERON:0001890,1.88e-93,41;UBERON:0003080,1.88e-93,41;UBERON:0006240,1.88e-93,41;UBERON:0002791,2.58e-90,32;UBERON:0003528,5.76e-85,34;UBERON:0002020,5.76e-85,34;UBERON:0002619,4.31e-72,22;UBERON:0000073,6.77e-72,53;UBERON:0002616,6.77e-72,53;UBERON:0001950,4.66e-69,20;UBERON:0001049,6.35e-68,56;UBERON:0005068,6.35e-68,56;UBERON:0006241,6.35e-68,56;UBERON:0007135,6.35e-68,56;UBERON:0000956,1.77e-63,25;UBERON:0000203,1.77e-63,25;UBERON:0003056,3.73e-62,61;UBERON:0000955,1.25e-59,68;UBERON:0006238,1.25e-59,68;UBERON:0001017,3.83e-54,81;UBERON:0001016,1.76e-48,89;UBERON:0003075,1.66e-45,82;UBERON:0007284,1.66e-45,82;UBERON:0002346,3.04e-43,86;UBERON:0002420,1.56e-42,9;UBERON:0007245,1.56e-42,9;UBERON:0010009,1.56e-42,9;UBERON:0010011,1.56e-42,9;UBERON:0000454,1.56e-42,9;UBERON:0007023,9.79e-42,114;UBERON:0010371,3.42e-35,104;UBERON:0000369,1.35e-32,4;UBERON:0002435,1.35e-32,4;UBERON:0000204,1.35e-32,4;UBERON:0010082,1.35e-32,4;UBERON:0010314,1.35e-29,132;UBERON:0009663,1.16e-28,7;UBERON:0000349,5.39e-25,5;UBERON:0005383,5.86e-25,3;UBERON:0005382,5.86e-25,3;UBERON:0001872,1.13e-24,5;UBERON:0004121,8.06e-24,171;UBERON:0000924,8.06e-24,171;UBERON:0006601,8.06e-24,171;UBERON:0000125,2.84e-22,9;UBERON:0002308,2.84e-22,9;UBERON:0000200,1.01e-20,6;UBERON:0011216,5.18e-19,223;UBERON:0001871,5.46e-18,6;UBERON:0000025,2.14e-17,192;UBERON:0001873,3.30e-17,2;UBERON:0010122,3.30e-17,2;UBERON:0001876,1.60e-16,2;UBERON:0002021,1.52e-14,5;UBERON:0004111,3.83e-13,240;UBERON:0001870,3.42e-11,3;UBERON:0001874,1.60e-09,1;UBERON:0000483,1.90e-09,306;UBERON:0001882,2.04e-09,1;UBERON:0005403,2.04e-09,1;UBERON:0000119,2.57e-09,309;UBERON:0002022,2.82e-09,1;UBERON:0007190,4.54e-09,1;UBERON:0002581,5.75e-09,1;UBERON:0002902,6.22e-09,1;UBERON:0009899,6.22e-09,1;UBERON:0003112,1.07e-08,1;UBERON:0011158,1.07e-08,1;UBERON:0003128,1.07e-08,1;UBERON:0001703,1.07e-08,1;UBERON:0002241,1.07e-08,1;UBERON:0004761,1.07e-08,1;UBERON:0009617,1.07e-08,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327447688744282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.96488588659779,1.68803299692615,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20598527610407,0,0,0,0,0,0,0,0,0,0,10.6288966297661,13.9891868805473,0,0,0,1.31631238292384,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202203398942031,0,4.2167600230561,0,0,0,0.394584402849391,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.46912104227927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.4037825983881,0.958337652243951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,1.22583065500418,0,0,0,0,0,4.25246896606173,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.65820453990096,3.05065662254908,0.876336514945499,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.967809053062115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.12054996369725,4.25089728976755,0.798169295285756,3.07674546361133,0.504143392443436,2.07471757392654,1.13032951942296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.76904096935418,5.46754669029693,1.2401207790071,1.96589011601111,0.546974809018219,0,0,0,0,0,0,0,0,0,0,0,0.135939465953663,2.23627430113687,0,0,0,17.1255993008442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.53555748992756,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03432995861895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p12@PHACTR1 | |||
}} |
Latest revision as of 08:58, 20 September 2015
Short description: | p12@PHACTR1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_PHACTR1_5end |
Coexpression cluster: | C35_caudate_putamen_diencephalon_nucleus_globus_thalamus_insula |
Association with transcript: | 61bp_to_uc010jpc.2, uc011dir.1_5end |
EntrezGene: | PHACTR1 |
HGNC: | 20990 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data