FFCP PHASE1:Hg19::chr6:160102006..160102195,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=97bp_to_BC041951_5end | |||
|cluster_id=chr6:160102006..160102195,- | |||
|coexpression_cluster_id=C954 | |||
|description=CAGE_peak_1_at_BC041951_5end | |||
|id=chr6:160102006..160102195,- | |||
|ontology_enrichment_celltype=CL:0000766!5.28e-18!76;CL:0002194!1.47e-16!63;CL:0000576!1.47e-16!63;CL:0000040!1.47e-16!63;CL:0000559!1.47e-16!63;CL:0002057!6.79e-16!42;CL:0002009!1.45e-15!65;CL:0000839!4.15e-14!70;CL:0000860!9.52e-14!45;CL:0000557!2.79e-13!71;CL:0000763!3.69e-07!112;CL:0000049!3.69e-07!112 | |||
|ontology_enrichment_celltype_v019=CL:0000860;9.18e-20;33!CL:0002057;9.18e-20;33!CL:0000473;1.64e-19;39!CL:0000234;1.64e-19;39!CL:0000576;1.61e-11;48!CL:0000766;2.83e-10;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,1.50e-24,72;CL:0002194,2.32e-22,59;CL:0000576,2.32e-22,59;CL:0000040,2.32e-22,59;CL:0000559,2.32e-22,59;CL:0000473,5.45e-22,48;CL:0000234,5.45e-22,48;CL:0002009,6.37e-21,61;CL:0000839,4.34e-19,66;CL:0000557,1.73e-18,67;CL:0000860,2.80e-18,42;CL:0002057,2.80e-18,42;CL:0000763,2.32e-11,108;CL:0000049,2.32e-11,108 | |||
|ontology_enrichment_development_v019=CL:0002057;9.96e-14;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!4.95e-13!102;UBERON:0003061!4.95e-13!102;UBERON:0007023!1.06e-12!115;UBERON:0002193!1.07e-12!112;UBERON:0002371!5.01e-12!80;UBERON:0001474!7.25e-11!86;UBERON:0002204!6.20e-10!167;UBERON:0002405!6.79e-10!115;UBERON:0004765!8.37e-10!101;UBERON:0001434!8.37e-10!101;UBERON:0000926!1.78e-07!448;UBERON:0004120!1.78e-07!448;UBERON:0006603!1.78e-07!448 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.00e-17,108;UBERON:0002390,1.80e-17,98;UBERON:0003061,1.80e-17,98;UBERON:0002371,1.94e-16,76;UBERON:0001474,4.83e-15,82;UBERON:0002405,8.14e-15,93;UBERON:0001434,9.85e-15,100;UBERON:0004765,1.36e-14,90;UBERON:0002204,8.54e-13,167;UBERON:0007023,3.24e-09,114;UBERON:0003081,3.30e-08,203;UBERON:0000926,4.81e-07,315;UBERON:0004120,4.81e-07,315;UBERON:0006603,4.81e-07,315 | |||
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| |||
|short_description=p1@BC041951 | |||
}} |
Latest revision as of 21:37, 30 July 2015
Short description: | p1@BC041951 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_BC041951_5end |
Coexpression cluster: | C954_heart_CD14_Neutrophils_Eosinophils_Lymphatic_renal_Monocytederived |
Association with transcript: | 97bp_to_BC041951_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 1.50e-24 | 72 |
monopoietic cell | 2.32e-22 | 59 |
monocyte | 2.32e-22 | 59 |
monoblast | 2.32e-22 | 59 |
promonocyte | 2.32e-22 | 59 |
defensive cell | 5.45e-22 | 48 |
phagocyte | 5.45e-22 | 48 |
macrophage dendritic cell progenitor | 6.37e-21 | 61 |
myeloid lineage restricted progenitor cell | 4.34e-19 | 66 |
granulocyte monocyte progenitor cell | 1.73e-18 | 67 |
classical monocyte | 2.80e-18 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.80e-18 | 42 |
myeloid cell | 2.32e-11 | 108 |
common myeloid progenitor | 2.32e-11 | 108 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 1.00e-17 | 108 |
hematopoietic system | 1.80e-17 | 98 |
blood island | 1.80e-17 | 98 |
bone marrow | 1.94e-16 | 76 |
bone element | 4.83e-15 | 82 |
immune system | 8.14e-15 | 93 |
skeletal system | 9.85e-15 | 100 |
skeletal element | 1.36e-14 | 90 |
musculoskeletal system | 8.54e-13 | 167 |
adult organism | 3.24e-09 | 114 |
lateral plate mesoderm | 3.30e-08 | 203 |
mesoderm | 4.81e-07 | 315 |
mesoderm-derived structure | 4.81e-07 | 315 |
presumptive mesoderm | 4.81e-07 | 315 |