FFCP PHASE1:Hg19::chr7:27205175..27205184,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3205 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5109 | |||
|TSSclassifier=strong | |||
|UniProt=P31269 | |||
|association_with_transcript=-26bp_to_NM_152739,uc003syt.2_5end | |||
|cluster_id=chr7:27205175..27205184,- | |||
|description=CAGE_peak_3_at_HOXA9_5end | |||
|id=chr7:27205175..27205184,- | |||
|ontology_enrichment_celltype=CL:1000497!1.18e-13!18;CL:0002518!1.18e-13!18;CL:1000449!1.33e-11!16;CL:0002681!1.60e-11!13;CL:0002584!1.60e-11!13;CL:1000507!2.32e-08!12;CL:1000494!2.32e-08!12;CL:1000612!2.24e-07!7;CL:1000746!2.24e-07!7 | |||
|ontology_enrichment_celltype_v019=CL:1000497;1.64e-14;17!CL:0002518;1.64e-14;17!CL:1000449;5.57e-10;15!CL:0002681;1.49e-09;12!CL:0002584;1.49e-09;12!CL:1000746;6.45e-08;7!CL:1000612;6.45e-08;7!CL:1000507;7.17e-08;10!CL:1000494;7.17e-08;10!CL:0000650;2.87e-07;2!CL:1000500;2.87e-07;2!CL:1000618;2.87e-07;2!CL:1001318;2.87e-07;2!CL:0002173;2.87e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:1000497,1.88e-14,17;CL:0002518,1.88e-14,17;CL:1000449,6.59e-10,15;CL:0002681,2.03e-09,12;CL:0002584,2.03e-09,12;CL:1000507,8.29e-08,10;CL:1000494,8.29e-08,10;CL:1000746,1.22e-07,7;CL:1000612,1.22e-07,7;CL:0000650,8.19e-07,2;CL:1000500,8.19e-07,2;CL:1000618,8.19e-07,2;CL:1001318,8.19e-07,2;CL:0002173,8.19e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0003918;2.89e-08;10!UBERON:0007687;2.89e-08;10!UBERON:0003104;3.61e-07;31 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0006554!3.67e-20!44;UBERON:0001008!2.04e-19!45;UBERON:0000489!1.22e-14!32;UBERON:0002113!5.23e-14!27;UBERON:0003918!5.23e-14!27;UBERON:0005095!5.23e-14!27;UBERON:0007687!5.23e-14!27;UBERON:0003064!4.98e-12!37;UBERON:0004211!1.33e-11!16;UBERON:0001285!1.33e-11!16;UBERON:0007684!1.33e-11!16;UBERON:0003220!1.33e-11!16;UBERON:0004208!1.33e-11!16;UBERON:0001225!1.60e-11!13;UBERON:0008987!1.60e-11!13;UBERON:0006555!1.28e-10!17;UBERON:0005103!1.28e-10!17;UBERON:0000083!1.28e-10!17;UBERON:0009201!1.28e-10!17;UBERON:0004819!1.28e-10!17;UBERON:0006553!1.28e-10!17;UBERON:0003074!1.28e-10!17;UBERON:0003060!1.28e-10!17;UBERON:0000080!9.41e-10!18;UBERON:0002120!9.41e-10!18;UBERON:0004875!9.41e-10!18;UBERON:0005721!9.41e-10!18;UBERON:0005754!9.41e-10!18;UBERON:0007297!9.41e-10!18;UBERON:0004876!1.55e-09!20;UBERON:0003887!1.30e-08!21;UBERON:0001851!1.49e-08!16;UBERON:0009773!2.32e-08!12;UBERON:0001231!2.32e-08!12;UBERON:0004810!2.32e-08!12;UBERON:0000353!8.26e-08!17;UBERON:0000074!2.24e-07!7;UBERON:0001229!2.24e-07!7;UBERON:0001230!2.24e-07!7;UBERON:0005749!2.24e-07!7;UBERON:0004199!2.24e-07!7;UBERON:0004209!2.24e-07!7;UBERON:0004198!2.24e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0006554;2.09e-18;30!UBERON:0001008;2.09e-18;30!UBERON:0002113;1.74e-17;24!UBERON:0011143;1.74e-17;24!UBERON:0000489;1.83e-16;29!UBERON:0006555;5.57e-10;15!UBERON:0004819;5.57e-10;15!UBERON:0001285;5.57e-10;15!UBERON:0007684;5.57e-10;15!UBERON:0001225;1.49e-09;12!UBERON:0008987;1.49e-09;12!UBERON:0000074;6.45e-08;7!UBERON:0001229;6.45e-08;7!UBERON:0004211;7.17e-08;10!UBERON:0009773;7.17e-08;10!UBERON:0001231;7.17e-08;10!UBERON:0004810;7.17e-08;10!UBERON:0001851;1.70e-07;15!UBERON:0000353;1.70e-07;15!UBERON:0003567;2.87e-07;2!UBERON:0003838;2.87e-07;2!UBERON:0003586;2.87e-07;2!UBERON:0005169;2.87e-07;2!UBERON:0002321;2.87e-07;2!UBERON:0005215;2.87e-07;2!UBERON:0002303;2.87e-07;2!UBERON:0002319;2.87e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002113,5.59e-16,26;UBERON:0003918,5.59e-16,26;UBERON:0011143,5.59e-16,26;UBERON:0005095,5.59e-16,26;UBERON:0007687,5.59e-16,26;UBERON:0000489,3.38e-15,31;UBERON:0006554,3.22e-12,47;UBERON:0001008,6.86e-12,48;UBERON:0004211,6.59e-10,15;UBERON:0009773,6.59e-10,15;UBERON:0001231,6.59e-10,15;UBERON:0001285,6.59e-10,15;UBERON:0007684,6.59e-10,15;UBERON:0004208,6.59e-10,15;UBERON:0001225,2.03e-09,12;UBERON:0008987,2.03e-09,12;UBERON:0006555,3.19e-09,16;UBERON:0004819,3.19e-09,16;UBERON:0004810,8.29e-08,10;UBERON:0002417,1.18e-07,60;UBERON:0000916,1.18e-07,60;UBERON:0010532,1.22e-07,7;UBERON:0000074,1.22e-07,7;UBERON:0001229,1.22e-07,7;UBERON:0001230,1.22e-07,7;UBERON:0003220,1.22e-07,7;UBERON:0005749,1.22e-07,7;UBERON:0004199,1.22e-07,7;UBERON:0004209,1.22e-07,7;UBERON:0004198,1.22e-07,7;UBERON:0005172,1.33e-07,54;UBERON:0005173,1.33e-07,54;UBERON:0001851,2.16e-07,15;UBERON:0000353,2.16e-07,15;UBERON:0003567,8.19e-07,2;UBERON:0003838,8.19e-07,2;UBERON:0003586,8.19e-07,2;UBERON:0005169,8.19e-07,2;UBERON:0002321,8.19e-07,2;UBERON:0005215,8.19e-07,2;UBERON:0002303,8.19e-07,2;UBERON:0002319,8.19e-07,2 | |||
|phase1_expression=0.363356758541113,0,0,0,0,0,0,0,0.783556884599516,0.982935746006035,0.697801167972428,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17440175733939,0,0,0,0,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.526768169550154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0,0,0,0,0.12786256184353,0.361439152384566,0,0.434539556882471,0,0.973269740605272,0,0,0,0.0654895377488563,0,0,0.324547393654683,0.174129737299267,0,0,0.571994910780128,0.371457501329565,0.39752481473341,0,0,0,0,0,0,1.03366703667732,0.71153252537342,2.00832367658802,1.20848795132744,0.760272105718513,1.46437234528902,1.83831540172934,0,0.267899184852239,0.22452937262617,0.112611480483322,0,0,0,0,0,0,0.993943903390637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352303495931295,0.323745888736263,0.280901613404497,0,0,0,0,0,0,2.15585442544872,0,0,0,0,0,0,0,0.358779271377724,0.213557388818567,0.211931901159562,0.300091096084402,0.103052529238439,0.257640540045629,0.558350568994769,0,0.292311015483596,0,0.460249493211497,0,0.355009592516614,0.604512589365842,0.169560592310488,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.33678033231916,0,0,0,0.402115889646523,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.268675568108545,0,0,0,0,0,0.576479813667846,0.25248486685276,0.317489471460845,0,0,0,1.02827492703324,0.600686115687835,0,0,0,0,0.129271715757778,3.57656445851882,0.845302752556,0,0,0.771622122786426,0,0.266422179016099,0,0.542621605391443,0,0.325736184293735,0,0.791951872933429,0,0,0,0,0,0,0,0,0,0.579125226670317,0.205476322550383,0.358121926479791,1.90544744788996,0,0,0,0,0,0,0,0,0,0,0,0.36807447515742,1.50051156317903,0.542530047399471,0,0,0,0,0.300946099727719,0,0,1.32845119707087,0.368738337083406,0.260650843404249,0,0,0,0,0,0,0,0,0.496215615637554,0.460385919864187,0.280660094433074,0,1.02341449813341,0.160853921143607,0,1.07946785661859,0.177561725313127,0.328508624055237,0,0.581051892299796,1.0877350463246,0,0.828728900423067,0.229628896329213,0.364182336013434,0.393373244878272,0.451199612907412,0.462092022626489,0,1.46139224653261,0.211103257785751,2.27466768141793,0.850468526382578,0.431831832204279,4.62681758070868,1.08378575017541,1.00337954770971,0.509752546090077,2.49322802678617,1.56712328305525,0,0,0,0,0,0,1.00726411300178,1.23764249880882,0.574265537996172,0.650060246036521,0,1.06337790121334,0,0,0.275673144969061,0.429680979473094,0.145016693914229,0.340906509664404,0.712256285173899,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.42793898803392,0,0,0.179872457583315,0,0.235624804691373,0,0,0,0,0.243713489631284,0,0.409499734223957,0.282810863907425,0,0,0,0,0.578775534266688,0,1.21746226177622,0.30982349809975,0,0.430234056612155,0.196498082026242,0.35667105148125,0,0,0.329294892959902,0,0,0,0,0,0.0941438007767792,0.43050537267123,1.68471475667626,0,0.229723400206959,0.507447609232169,0,0,0,0,0,0,0,0.747768497892312,0,0,0,0,0,0,0.798317485731266,3.25559129225023,0.211673582723883,0,0.561594356226918,0.912938716132769,0,0,1.69291777801603,0.321176150207399,1.00899853595524,1.70338495076131,0,0,0.447352215784832,0.500547425135725,0.19538809540204,0.835218521685727,0,0,0,0,0,0.439524537815682,0,0,0,0,0,0,0,0,0,0,0,0,0.552567831062295,0,0,0,0,0,0,1.53471711068062,0.690503839458535,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0.868124974666461,0,0,0,0,0,0,0,0.41827123283581,0.846452843541768,0,0,0,0,0,0.183195186803725,0,0,0,0.332423363800313,0,0,0,0,0.635746315921515,0,0.816164040795739,1.41353071433941,0,0,0.176915129006678,0.611030144933625,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,2.85614496887536,1.45163467956146,0,0,0,0,0.853828638089378,0,2.08271686002157,0.685946781900644,0.609414446062818,0,0.343972064943233,0,0,0,0,1.85337866052151,0,0.685209623233754,0,0,0,0,0,0,0,0,2.4023299700675,0,0,0.707082103850386,1.76675467895698,0.941425616810999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335434687599266,0.551639951094387,1.36381929150995,0,0,1.15149118391667,0,0,0,0,0,0.653174720218818,1.19730191562487,0.985110248992068,1.02232813071253,0,0,2.65013777824443,0,0,0,0,0,0,0,0,0,0.852548188666271,1.27668251554036,0.544017803369474,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,1.1593682288866,0.298509605773748,0.233713309847224,0,0.189403005275089,0.50313580350515,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0.150257608997218,0,0,0,0,0,0,0,0.343395705182793,1.01024846629776,0,0,0,0,0,1.15761237161917,1.22368352253234,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982829546539238,0,0,0,0.320075189082423,0,0,0.920529751259204,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.690359926060101,0.198916222116275,0.150420656698515,0.20170506870352,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0,0,0,0,0.778619813244484,0.706437835654626,0,0,0.913158720509496,2.15927591218621,2.8665101273223,0,0,0,2.43401581223611,0,0,0,0,0,2.01164401241961,3.32332278560715,0,0,0,0,0,0,0,1.29485767437579,1.23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| |||
|short_description=p3@HOXA9 | |||
}} |
Latest revision as of 01:45, 18 September 2015
Short description: | p3@HOXA9 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_HOXA9_5end |
Coexpression cluster: | NA |
Association with transcript: | -26bp_to_NM_152739, uc003syt.2_5end |
EntrezGene: | HOXA9 |
HGNC: | 5109 |
UniProt: | P31269 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney cell | 1.88e-14 | 17 |
kidney epithelial cell | 1.88e-14 | 17 |
epithelial cell of nephron | 6.59e-10 | 15 |
kidney cortical cell | 2.03e-09 | 12 |
renal cortical epithelial cell | 2.03e-09 | 12 |
kidney tubule cell | 8.29e-08 | 10 |
nephron tubule epithelial cell | 8.29e-08 | 10 |
glomerular cell | 1.22e-07 | 7 |
kidney corpuscule cell | 1.22e-07 | 7 |
mesangial cell | 8.19e-07 | 2 |
kidney interstitial cell | 8.19e-07 | 2 |
juxtaglomerular complex cell | 8.19e-07 | 2 |
renal interstitial pericyte | 8.19e-07 | 2 |
extraglomerular mesangial cell | 8.19e-07 | 2 |