FFCP PHASE1:Mm9::chr7:104936858..104936900,+: Difference between revisions
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{{FFCP|EntrezGene=18479|HGNC=|MCL_coexpression_id=13|UniProt=G3XA44,Q9R2B2|association_with_transcript=-150bp_to_ENSMUST00000172423,uc009iju.1_5end|description=CAGE_peak_6_at_Pak1_5end|id=chr7:104936858..104936900,+|ontology_enrichment_celltype=CL:0000117!1.53e-18!23;CL:0000337!1.53e-18!23;CL:0000540!2.61e-13!33;CL:0000047!2.61e-13!33;CL:0000031!2.61e-13!33;CL:0000404!2.61e-13!33;CL:0000393!5.76e-11!39;CL:0000211!5.76e-11!39;CL:0000221!1.32e-10!44;CL:0000133!1.32e-10!44;CL:0002319!1.60e-10!43;CL:0000055!1.42e-08!50|ontology_enrichment_celltype_v019_2=CL:0000117,1.30e-36,23;CL:0000337,1.30e-36,23;CL:0000540,1.19e-23,33;CL:0000047,1.19e-23,33;CL:0000031,1.19e-23,33;CL:0000404,1.19e-23,33;CL:0000393,4.41e-19,39;CL:0000211,4.41e-19,39;CL:0002319,9.45e-17,43;CL:0000221,3.10e-16,44;CL:0000133,3.10e-16,44;CL:0002609,7.85e-09,6;CL:0002321,4.29e-08,70;CL:0002613,1.77e-07,3;CL:0000120,6.95e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!1.67e-23!75;UBERON:0001016!1.67e-23!75;UBERON:0002020!6.03e-23!34;UBERON:0001017!7.81e-23!73;UBERON:0005743!7.81e-23!73;UBERON:0001049!1.06e-22!52;UBERON:0005068!1.06e-22!52;UBERON:0006241!1.06e-22!52;UBERON:0007135!1.06e-22!52;UBERON:0000955!3.49e-21!50;UBERON:0006238!3.49e-21!50;UBERON:0002616!1.31e-20!49;UBERON:0002791!2.89e-19!29;UBERON:0003528!2.89e-19!29;UBERON:0001893!2.89e-19!29;UBERON:0000033!2.20e-18!63;UBERON:0004121!1.30e-17!102;UBERON:0000924!1.30e-17!102;UBERON:0006601!1.30e-17!102;UBERON:0003080!3.35e-17!40;UBERON:0002780!1.41e-16!39;UBERON:0001890!1.41e-16!39;UBERON:0006240!1.41e-16!39;UBERON:0002346!2.56e-16!71;UBERON:0003075!2.56e-16!71;UBERON:0007284!2.56e-16!71;UBERON:0003056!1.86e-15!49;UBERON:0000956!4.05e-13!21;UBERON:0001869!4.05e-13!21;UBERON:0000203!4.05e-13!21;UBERON:0002619!6.42e-10!17;UBERON:0007811!2.19e-09!86;UBERON:0002021!1.05e-08!10;UBERON:0000411!1.05e-08!10;UBERON:0001950!1.05e-08!10;UBERON:0002420!2.07e-07!8;UBERON:0007245!2.07e-07!8;UBERON:0010009!2.07e-07!8;UBERON:0010011!2.07e-07!8;UBERON:0000454!2.07e-07!8;UBERON:0000153!3.38e-07!94|ontology_enrichment_uberon_v019_2=UBERON:0002020,1.87e-48,34;UBERON:0000073,1.05e-45,54;UBERON:0001049,2.90e-42,52;UBERON:0005068,2.90e-42,52;UBERON:0006241,2.90e-42,52;UBERON:0007135,2.90e-42,52;UBERON:0003528,3.57e-40,29;UBERON:0002791,3.57e-40,29;UBERON:0001893,3.57e-40,29;UBERON:0001017,7.60e-40,73;UBERON:0001016,1.63e-38,75;UBERON:0003080,3.21e-34,40;UBERON:0002616,3.62e-33,46;UBERON:0002780,7.73e-33,39;UBERON:0001890,7.73e-33,39;UBERON:0006240,7.73e-33,39;UBERON:0002346,1.35e-32,64;UBERON:0003075,1.35e-32,64;UBERON:0007284,1.35e-32,64;UBERON:0000955,2.75e-32,47;UBERON:0006238,2.75e-32,47;UBERON:0004121,2.79e-28,95;UBERON:0000924,2.79e-28,95;UBERON:0006601,2.79e-28,95;UBERON:0010371,1.98e-27,73;UBERON:0003056,1.70e-26,49;UBERON:0000956,2.13e-26,21;UBERON:0001869,2.13e-26,21;UBERON:0000203,2.13e-26,21;UBERON:0010314,7.50e-20,92;UBERON:0002619,2.78e-19,17;UBERON:0002021,1.52e-17,10;UBERON:0000411,1.52e-17,10;UBERON:0001950,1.52e-17,10;UBERON:0002420,1.17e-14,8;UBERON:0007245,1.17e-14,8;UBERON:0010009,1.17e-14,8;UBERON:0010011,1.17e-14,8;UBERON:0000454,1.17e-14,8;UBERON:0000025,3.02e-14,114;UBERON:0004111,1.03e-12,122;UBERON:0000369,1.17e-10,5;UBERON:0002435,1.17e-10,5;UBERON:0000204,1.17e-10,5;UBERON:0010082,1.17e-10,5;UBERON:0002240,3.03e-10,6;UBERON:0005174,3.03e-10,6;UBERON:0001137,3.03e-10,6;UBERON:0001948,4.79e-09,5;UBERON:0002315,4.79e-09,5;UBERON:0011216,1.18e-08,194;UBERON:0003076,3.65e-08,12;UBERON:0003057,3.65e-08,12;UBERON:0002950,6.29e-07,4;UBERON:0001891,6.29e-07,4;UBERON:0009616,6.29e-07,4;UBERON:0010286,6.29e-07,4|phase1_expression=0.160148847104794,0.348975407639361,0,0,0,0.16787927191189,0.700837921786577,0,0.140788722151667,0,0,0,0,0,0,0,0,0,0,0,0.595303031057488,0,0,0.159992422793407,0,0,0,0.215471232685889,0,0,0,0,0,0,0.577703239502549,0.166234645358492,0,0,0,0,0,0.683045484958446,0,0,0.202753862439029,0.183546752161682,0,0.218025156380447,0,0,0.279972843250725,0,0.167782606057736,0,0,0,0,0,5.86717736492834,5.81890077199236,3.1691570175309,0,0,0,0,0,0,0,6.63613518774257,5.40023753326763,5.25812403378455,3.14216082844184,2.20868540951614,5.51208596467293,5.271500906003,0.919218786610021,1.10115880999389,3.70293280447044,3.68655679814984,8.83638127792299,7.04454855738554,6.25096044668112,2.51264699101243,2.25105044012672,2.13917546887534,2.35702868378934,3.27454865837937,4.65998614563251,0.227178579999552,0.453429360640713,0,0,0,0,0,0,0.421333260395256,0.170430322578058,0,0,0.14084341977668,0,0,0,0,0,0.505524445014783,0.11418387971906,0,0.148442139064825,0,0,0,0,0.117588707135705,0,0.494389935468748,0,0,0,0,0,0,0.585561594023094,0.209446706813455,0,0.359445373517761,0,0,2.09706895166752,1.37250180845588,10.3036568732549,4.51943232499919,3.58001640262463,3.32460871295296,1.78465389374533,0,0,0,0,0.260240885925407,0,0.180062129805349,0.452114453507145,0.340182495756639,0,0.187403449119458,0,0,0,0,0,0,0,0,0.199034266818493,0.702213187313235,0,0,0.207125772535502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05144974282064,5.35103984372279,0,0,0.426576501070468,0.232236671860439,0,0.201683524623343,0.667134131534611,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0632365371242573,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0,0,0.221464689648775,0,0,0,0.144649058581512,0,0,0,0,2.72936002979246,1.99259867206745,0,0,0,0,0,0,0.222798674082394,0,0,0.584511715822624,0.395287777946524,0.963963949265421,0,0.178065603667255,0,0,0,0.242780636154981,0,0,0,0,0.516856586336442,0,0,0,0,0,0,0,0.388076051348264,0.643011105094777,0,0,0.164549020602121,0,0,0,0,0.16488625294148,0,0.120625849856312,0,0,0.291480836629851,1.29797711407357,0,0,0,0,0,0.228778173206523,0.169978429993855,0.139951452323658,0,0,0,0,0.216010681643603,0,0.218362563746178,0.134864346384821,0.165306911450672,0,0.129614973291793,0,3.38215763210514,0,0.165458490457098,0,0.129159823477731,0,0,0.13020438484395,0.943734099831398,1.20792060413003,0,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0,0,0,0,0,0,0.183151624267265,0,0,2.25900737046827,2.76195141904306,4.58316410751517,3.09335728218638,4.7955776383945,3.0215755895588,3.37511250115903,5.85417564191487,5.43770890781046,3.10656187051092,0.415149390336707,0,1.36586884603307,0.729320151204882,0.628839487883947,0.735374033800057,0,1.03017528619447,0.64183841918363,0.505394423527595,0,0.754505365544305,1.03005658216871,0.512201219238954,0.976402972245426,0,0.811190281613988,0.77163688185482,0,0.735994600671987,0.342869252385415,0.354951612318675,0.715308569841963,0.726732083161643,0.470546902076653,0.423073039458382,0.73171189149109,0,0.679020569229309,0,0.711810108745045,0.886540341380071,0,0.929621047115796,0.578719832943424,2.49810577937946,0.701794825336225,0,0.382576664137687,0,0|short_description=p6@Pak1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=18479 | |||
|HGNC= | |||
|MCL_coexpression_id=13 | |||
|TSSclassifier=NA | |||
|UniProt=G3XA44,Q9R2B2 | |||
|association_with_transcript=-150bp_to_ENSMUST00000172423,uc009iju.1_5end | |||
|cluster_id=chr7:104936858..104936900,+ | |||
|description=CAGE_peak_6_at_Pak1_5end | |||
|id=chr7:104936858..104936900,+ | |||
|ontology_enrichment_celltype=CL:0000117!1.53e-18!23;CL:0000337!1.53e-18!23;CL:0000540!2.61e-13!33;CL:0000047!2.61e-13!33;CL:0000031!2.61e-13!33;CL:0000404!2.61e-13!33;CL:0000393!5.76e-11!39;CL:0000211!5.76e-11!39;CL:0000221!1.32e-10!44;CL:0000133!1.32e-10!44;CL:0002319!1.60e-10!43;CL:0000055!1.42e-08!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.30e-36,23;CL:0000337,1.30e-36,23;CL:0000540,1.19e-23,33;CL:0000047,1.19e-23,33;CL:0000031,1.19e-23,33;CL:0000404,1.19e-23,33;CL:0000393,4.41e-19,39;CL:0000211,4.41e-19,39;CL:0002319,9.45e-17,43;CL:0000221,3.10e-16,44;CL:0000133,3.10e-16,44;CL:0002609,7.85e-09,6;CL:0002321,4.29e-08,70;CL:0002613,1.77e-07,3;CL:0000120,6.95e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.67e-23!75;UBERON:0001016!1.67e-23!75;UBERON:0002020!6.03e-23!34;UBERON:0001017!7.81e-23!73;UBERON:0005743!7.81e-23!73;UBERON:0001049!1.06e-22!52;UBERON:0005068!1.06e-22!52;UBERON:0006241!1.06e-22!52;UBERON:0007135!1.06e-22!52;UBERON:0000955!3.49e-21!50;UBERON:0006238!3.49e-21!50;UBERON:0002616!1.31e-20!49;UBERON:0002791!2.89e-19!29;UBERON:0003528!2.89e-19!29;UBERON:0001893!2.89e-19!29;UBERON:0000033!2.20e-18!63;UBERON:0004121!1.30e-17!102;UBERON:0000924!1.30e-17!102;UBERON:0006601!1.30e-17!102;UBERON:0003080!3.35e-17!40;UBERON:0002780!1.41e-16!39;UBERON:0001890!1.41e-16!39;UBERON:0006240!1.41e-16!39;UBERON:0002346!2.56e-16!71;UBERON:0003075!2.56e-16!71;UBERON:0007284!2.56e-16!71;UBERON:0003056!1.86e-15!49;UBERON:0000956!4.05e-13!21;UBERON:0001869!4.05e-13!21;UBERON:0000203!4.05e-13!21;UBERON:0002619!6.42e-10!17;UBERON:0007811!2.19e-09!86;UBERON:0002021!1.05e-08!10;UBERON:0000411!1.05e-08!10;UBERON:0001950!1.05e-08!10;UBERON:0002420!2.07e-07!8;UBERON:0007245!2.07e-07!8;UBERON:0010009!2.07e-07!8;UBERON:0010011!2.07e-07!8;UBERON:0000454!2.07e-07!8;UBERON:0000153!3.38e-07!94 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,1.87e-48,34;UBERON:0000073,1.05e-45,54;UBERON:0001049,2.90e-42,52;UBERON:0005068,2.90e-42,52;UBERON:0006241,2.90e-42,52;UBERON:0007135,2.90e-42,52;UBERON:0003528,3.57e-40,29;UBERON:0002791,3.57e-40,29;UBERON:0001893,3.57e-40,29;UBERON:0001017,7.60e-40,73;UBERON:0001016,1.63e-38,75;UBERON:0003080,3.21e-34,40;UBERON:0002616,3.62e-33,46;UBERON:0002780,7.73e-33,39;UBERON:0001890,7.73e-33,39;UBERON:0006240,7.73e-33,39;UBERON:0002346,1.35e-32,64;UBERON:0003075,1.35e-32,64;UBERON:0007284,1.35e-32,64;UBERON:0000955,2.75e-32,47;UBERON:0006238,2.75e-32,47;UBERON:0004121,2.79e-28,95;UBERON:0000924,2.79e-28,95;UBERON:0006601,2.79e-28,95;UBERON:0010371,1.98e-27,73;UBERON:0003056,1.70e-26,49;UBERON:0000956,2.13e-26,21;UBERON:0001869,2.13e-26,21;UBERON:0000203,2.13e-26,21;UBERON:0010314,7.50e-20,92;UBERON:0002619,2.78e-19,17;UBERON:0002021,1.52e-17,10;UBERON:0000411,1.52e-17,10;UBERON:0001950,1.52e-17,10;UBERON:0002420,1.17e-14,8;UBERON:0007245,1.17e-14,8;UBERON:0010009,1.17e-14,8;UBERON:0010011,1.17e-14,8;UBERON:0000454,1.17e-14,8;UBERON:0000025,3.02e-14,114;UBERON:0004111,1.03e-12,122;UBERON:0000369,1.17e-10,5;UBERON:0002435,1.17e-10,5;UBERON:0000204,1.17e-10,5;UBERON:0010082,1.17e-10,5;UBERON:0002240,3.03e-10,6;UBERON:0005174,3.03e-10,6;UBERON:0001137,3.03e-10,6;UBERON:0001948,4.79e-09,5;UBERON:0002315,4.79e-09,5;UBERON:0011216,1.18e-08,194;UBERON:0003076,3.65e-08,12;UBERON:0003057,3.65e-08,12;UBERON:0002950,6.29e-07,4;UBERON:0001891,6.29e-07,4;UBERON:0009616,6.29e-07,4;UBERON:0010286,6.29e-07,4 | |||
|phase1_expression=0.160148847104794,0.348975407639361,0,0,0,0.16787927191189,0.700837921786577,0,0.140788722151667,0,0,0,0,0,0,0,0,0,0,0,0.595303031057488,0,0,0.159992422793407,0,0,0,0.215471232685889,0,0,0,0,0,0,0.577703239502549,0.166234645358492,0,0,0,0,0,0.683045484958446,0,0,0.202753862439029,0.183546752161682,0,0.218025156380447,0,0,0.279972843250725,0,0.167782606057736,0,0,0,0,0,5.86717736492834,5.81890077199236,3.1691570175309,0,0,0,0,0,0,0,6.63613518774257,5.40023753326763,5.25812403378455,3.14216082844184,2.20868540951614,5.51208596467293,5.271500906003,0.919218786610021,1.10115880999389,3.70293280447044,3.68655679814984,8.83638127792299,7.04454855738554,6.25096044668112,2.51264699101243,2.25105044012672,2.13917546887534,2.35702868378934,3.27454865837937,4.65998614563251,0.227178579999552,0.453429360640713,0,0,0,0,0,0,0.421333260395256,0.170430322578058,0,0,0.14084341977668,0,0,0,0,0,0.505524445014783,0.11418387971906,0,0.148442139064825,0,0,0,0,0.117588707135705,0,0.494389935468748,0,0,0,0,0,0,0.585561594023094,0.209446706813455,0,0.359445373517761,0,0,2.09706895166752,1.37250180845588,10.3036568732549,4.51943232499919,3.58001640262463,3.32460871295296,1.78465389374533,0,0,0,0,0.260240885925407,0,0.180062129805349,0.452114453507145,0.340182495756639,0,0.187403449119458,0,0,0,0,0,0,0,0,0.199034266818493,0.702213187313235,0,0,0.207125772535502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05144974282064,5.35103984372279,0,0,0.426576501070468,0.232236671860439,0,0.201683524623343,0.667134131534611,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0632365371242573,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0,0,0.221464689648775,0,0,0,0.144649058581512,0,0,0,0,2.72936002979246,1.99259867206745,0,0,0,0,0,0,0.222798674082394,0,0,0.584511715822624,0.395287777946524,0.963963949265421,0,0.178065603667255,0,0,0,0.242780636154981,0,0,0,0,0.516856586336442,0,0,0,0,0,0,0,0.388076051348264,0.643011105094777,0,0,0.164549020602121,0,0,0,0,0.16488625294148,0,0.120625849856312,0,0,0.291480836629851,1.29797711407357,0,0,0,0,0,0.228778173206523,0.169978429993855,0.139951452323658,0,0,0,0,0.216010681643603,0,0.218362563746178,0.134864346384821,0.165306911450672,0,0.129614973291793,0,3.38215763210514,0,0.165458490457098,0,0.129159823477731,0,0,0.13020438484395,0.943734099831398,1.20792060413003,0,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0,0,0,0,0,0,0.183151624267265,0,0,2.25900737046827,2.76195141904306,4.58316410751517,3.09335728218638,4.7955776383945,3.0215755895588,3.37511250115903,5.85417564191487,5.43770890781046,3.10656187051092,0.415149390336707,0,1.36586884603307,0.729320151204882,0.628839487883947,0.735374033800057,0,1.03017528619447,0.64183841918363,0.505394423527595,0,0.754505365544305,1.03005658216871,0.512201219238954,0.976402972245426,0,0.811190281613988,0.77163688185482,0,0.735994600671987,0.342869252385415,0.354951612318675,0.715308569841963,0.726732083161643,0.470546902076653,0.423073039458382,0.73171189149109,0,0.679020569229309,0,0.711810108745045,0.886540341380071,0,0.929621047115796,0.578719832943424,2.49810577937946,0.701794825336225,0,0.382576664137687,0,0 | |||
|short_description=p6@Pak1 | |||
}} |
Latest revision as of 13:44, 25 September 2015
Short description: | p6@Pak1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Pak1_5end |
Coexpression cluster: | MCL_coexpression_mm9:13 |
Association with transcript: | -150bp_to_ENSMUST00000172423, uc009iju.1_5end |
EntrezGene: | Pak1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.30e-36 | 23 |
neuroblast (sensu Vertebrata) | 1.30e-36 | 23 |
neuron | 1.19e-23 | 33 |
neuronal stem cell | 1.19e-23 | 33 |
neuroblast | 1.19e-23 | 33 |
electrically signaling cell | 1.19e-23 | 33 |
electrically responsive cell | 4.41e-19 | 39 |
electrically active cell | 4.41e-19 | 39 |
neural cell | 9.45e-17 | 43 |
ectodermal cell | 3.10e-16 | 44 |
neurectodermal cell | 3.10e-16 | 44 |
neuron of cerebral cortex | 7.85e-09 | 6 |
embryonic cell | 4.29e-08 | 70 |
striatum neuron | 1.77e-07 | 3 |
granule cell | 6.95e-07 | 3 |