FFCP PHASE1:Hg19::chrX:67718803..67718831,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chrX:67718803..67718831,- | |||
|coexpression_cluster_id=C1047 | |||
|description=CAGE_peak_at_chrX:67718803..67718831,- | |||
|id=chrX:67718803..67718831,- | |||
|ontology_enrichment_celltype=CL:0000860!5.79e-26!45;CL:0002057!4.44e-25!42;CL:0000766!2.24e-18!76;CL:0000839!4.91e-15!70;CL:0000557!6.63e-15!71;CL:0002009!7.09e-14!65;CL:0002194!3.61e-13!63;CL:0000576!3.61e-13!63;CL:0000040!3.61e-13!63;CL:0000559!3.61e-13!63;CL:0000738!1.23e-12!140;CL:0002031!1.77e-11!124;CL:0000763!3.38e-10!112;CL:0000049!3.38e-10!112;CL:0002087!6.98e-10!119;CL:0000988!5.31e-09!182;CL:0000037!7.51e-09!172;CL:0000566!7.51e-09!172;CL:0002032!2.23e-08!165;CL:0000837!2.23e-08!165 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.04e-20;33!CL:0002057;1.04e-20;33!CL:0000473;6.02e-14;39!CL:0000234;6.02e-14;39!CL:0000576;1.66e-13;48!CL:0000766;3.71e-11;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.12e-26,42;CL:0002057,1.12e-26,42;CL:0000473,2.90e-22,48;CL:0000234,2.90e-22,48;CL:0000766,2.13e-19,72;CL:0000839,8.58e-16,66;CL:0000557,1.21e-15,67;CL:0002009,9.86e-15,61;CL:0002194,5.71e-14,59;CL:0000576,5.71e-14,59;CL:0000040,5.71e-14,59;CL:0000559,5.71e-14,59;CL:0000738,1.05e-13,136;CL:0002031,2.38e-12,120;CL:0002087,8.49e-11,115;CL:0000763,2.39e-10,108;CL:0000049,2.39e-10,108;CL:0000037,1.95e-09,168;CL:0000988,2.35e-09,177;CL:0002032,7.19e-09,161;CL:0000837,7.19e-09,161 | |||
|ontology_enrichment_development_v019=CL:0002057;4.02e-20;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!8.20e-17!102;UBERON:0003061!8.20e-17!102;UBERON:0002193!3.07e-15!112;UBERON:0002371!5.80e-13!80;UBERON:0001474!3.33e-12!86;UBERON:0002405!2.75e-09!115;UBERON:0001049!8.00e-09!57;UBERON:0005068!8.00e-09!57;UBERON:0006241!8.00e-09!57;UBERON:0007135!8.00e-09!57;UBERON:0004765!1.20e-08!101;UBERON:0001434!1.20e-08!101;UBERON:0002616!2.65e-07!59;UBERON:0000178!2.70e-07!15;UBERON:0000179!2.70e-07!15;UBERON:0000463!2.70e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.24e-07;15!UBERON:0000179;1.24e-07;15!UBERON:0000463;1.24e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.09e-17,98;UBERON:0003061,1.09e-17,98;UBERON:0002193,5.21e-16,108;UBERON:0002371,9.46e-14,76;UBERON:0001474,8.57e-13,82;UBERON:0002405,6.25e-11,93;UBERON:0004765,1.77e-09,90;UBERON:0001049,4.45e-09,56;UBERON:0005068,4.45e-09,56;UBERON:0006241,4.45e-09,56;UBERON:0007135,4.45e-09,56;UBERON:0000073,1.20e-08,53;UBERON:0002616,1.20e-08,53;UBERON:0001434,3.46e-08,100;UBERON:0000178,2.00e-07,15;UBERON:0000179,2.00e-07,15;UBERON:0000463,2.00e-07,15 | |||
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| |||
|short_description=p@chrX:67718803..67718831,- | |||
}} |
Latest revision as of 09:10, 1 August 2015
Short description: | p@chrX:67718803..67718831, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chrX:67718803..67718831, - |
Coexpression cluster: | C1047_Whole_blood_CD14_Neutrophils_Eosinophils_Reticulocytes_Mast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.12e-26 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.12e-26 | 42 |
defensive cell | 2.90e-22 | 48 |
phagocyte | 2.90e-22 | 48 |
myeloid leukocyte | 2.13e-19 | 72 |
myeloid lineage restricted progenitor cell | 8.58e-16 | 66 |
granulocyte monocyte progenitor cell | 1.21e-15 | 67 |
macrophage dendritic cell progenitor | 9.86e-15 | 61 |
monopoietic cell | 5.71e-14 | 59 |
monocyte | 5.71e-14 | 59 |
monoblast | 5.71e-14 | 59 |
promonocyte | 5.71e-14 | 59 |
leukocyte | 1.05e-13 | 136 |
hematopoietic lineage restricted progenitor cell | 2.38e-12 | 120 |
nongranular leukocyte | 8.49e-11 | 115 |
myeloid cell | 2.39e-10 | 108 |
common myeloid progenitor | 2.39e-10 | 108 |
hematopoietic stem cell | 1.95e-09 | 168 |
hematopoietic cell | 2.35e-09 | 177 |
hematopoietic oligopotent progenitor cell | 7.19e-09 | 161 |
hematopoietic multipotent progenitor cell | 7.19e-09 | 161 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.09e-17 | 98 |
blood island | 1.09e-17 | 98 |
hemolymphoid system | 5.21e-16 | 108 |
bone marrow | 9.46e-14 | 76 |
bone element | 8.57e-13 | 82 |
immune system | 6.25e-11 | 93 |
skeletal element | 1.77e-09 | 90 |
neural tube | 4.45e-09 | 56 |
neural rod | 4.45e-09 | 56 |
future spinal cord | 4.45e-09 | 56 |
neural keel | 4.45e-09 | 56 |
regional part of nervous system | 1.20e-08 | 53 |
regional part of brain | 1.20e-08 | 53 |
skeletal system | 3.46e-08 | 100 |
blood | 2.00e-07 | 15 |
haemolymphatic fluid | 2.00e-07 | 15 |
organism substance | 2.00e-07 | 15 |