FFCP PHASE1:Mm9::chr8:22814114..22814121,-: Difference between revisions
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{{FFCP|EntrezGene=382000|HGNC=|MCL_coexpression_id=58|UniProt=Q9D848,Q5ERJ0|association_with_transcript=0bp_to_ENSMUST00000071886,NM_001007582,uc009lbw.2_5end|description=CAGE_peak_1_at_AY761184_5end|id=chr8:22814114..22814121,-|ontology_enrichment_celltype=CL:0002563!8.91e-41!9;CL:0002251!8.91e-41!9;CL:0000239!4.40e-27!6;CL:0000677!4.40e-27!6;CL:0000212!4.40e-27!6;CL:0000584!4.40e-27!6;CL:0000066!1.81e-25!25;CL:0002076!4.97e-24!15;CL:0000075!3.59e-23!7;CL:0000223!9.82e-18!20;CL:0000473!1.92e-15!3;CL:0000627!1.92e-15!3;CL:0000682!1.92e-15!3;CL:0002250!3.32e-15!3;CL:0000063!1.71e-08!66|ontology_enrichment_celltype_v019_2=CL:0002563,2.70e-31,9;CL:0002251,2.70e-31,9;CL:0000066,1.48e-22,25;CL:0000682,6.83e-19,3;CL:0002076,1.35e-18,15;CL:0002250,1.36e-18,3;CL:0000239,1.14e-15,6;CL:0000677,1.14e-15,6;CL:0000584,1.14e-15,6;CL:0000223,8.17e-14,20;CL:0000075,1.79e-13,7;CL:0000473,2.05e-08,7|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000344!3.25e-59!15;UBERON:0001242!7.42e-50!13;UBERON:0000060!7.42e-50!13;UBERON:0001262!7.42e-50!13;UBERON:0004786!7.42e-50!13;UBERON:0003350!8.91e-41!9;UBERON:0004808!8.91e-41!9;UBERON:0001277!8.91e-41!9;UBERON:0004923!2.81e-36!24;UBERON:0000485!3.60e-33!11;UBERON:0000160!5.65e-19!43;UBERON:0000331!1.09e-14!3;UBERON:0002116!1.09e-14!3;UBERON:0001204!1.09e-14!3;UBERON:0001168!1.09e-14!3;UBERON:0005409!3.02e-13!59;UBERON:0001962!9.28e-11!2;UBERON:0001961!9.28e-11!2;UBERON:0001744!9.28e-11!2;UBERON:0000064!2.35e-08!99;UBERON:0002465!1.90e-07!3;UBERON:0001007!6.76e-07!128;UBERON:0001555!6.76e-07!128;UBERON:0007026!6.76e-07!128;UBERON:0004119!9.46e-07!130;UBERON:0000925!9.46e-07!130;UBERON:0006595!9.46e-07!130|ontology_enrichment_uberon_v019_2=UBERON:0000344,1.10e-54,15;UBERON:0001242,1.39e-43,13;UBERON:0001262,1.39e-43,13;UBERON:0004786,1.39e-43,13;UBERON:0004923,9.90e-34,24;UBERON:0003350,2.70e-31,9;UBERON:0004808,2.70e-31,9;UBERON:0001277,2.70e-31,9;UBERON:0000485,1.58e-25,11;UBERON:0000331,6.00e-18,3;UBERON:0002116,6.00e-18,3;UBERON:0001204,6.00e-18,3;UBERON:0001168,6.00e-18,3;UBERON:0000160,1.12e-17,31;UBERON:0002108,1.28e-13,4;UBERON:0001962,4.84e-13,2;UBERON:0001961,4.84e-13,2;UBERON:0001744,4.84e-13,2;UBERON:0005409,2.90e-11,47;UBERON:0002465,5.41e-09,3;UBERON:0003199,2.79e-07,1|phase1_expression=0,0.697950815278722,0.454999239389536,1.20985684522732,1.50268718983904,3.69334398206158,9.34450562382103,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.75972722056264,4.35877634027623,3.44539178469012,11.630573896295,13.3592164265251,4.56056206695297,1.51218077855958,1.55211357458713,0,0,0,1.73310971850765,24.4364928676984,3.87921776898501,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510914110417183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.264450566663544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p1@AY761184}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=382000 | |||
|HGNC= | |||
|MCL_coexpression_id=58 | |||
|TSSclassifier=NA | |||
|UniProt=Q9D848,Q5ERJ0 | |||
|association_with_transcript=0bp_to_ENSMUST00000071886,NM_001007582,uc009lbw.2_5end | |||
|cluster_id=chr8:22814114..22814121,- | |||
|description=CAGE_peak_1_at_AY761184_5end | |||
|id=chr8:22814114..22814121,- | |||
|ontology_enrichment_celltype=CL:0002563!8.91e-41!9;CL:0002251!8.91e-41!9;CL:0000239!4.40e-27!6;CL:0000677!4.40e-27!6;CL:0000212!4.40e-27!6;CL:0000584!4.40e-27!6;CL:0000066!1.81e-25!25;CL:0002076!4.97e-24!15;CL:0000075!3.59e-23!7;CL:0000223!9.82e-18!20;CL:0000473!1.92e-15!3;CL:0000627!1.92e-15!3;CL:0000682!1.92e-15!3;CL:0002250!3.32e-15!3;CL:0000063!1.71e-08!66 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,2.70e-31,9;CL:0002251,2.70e-31,9;CL:0000066,1.48e-22,25;CL:0000682,6.83e-19,3;CL:0002076,1.35e-18,15;CL:0002250,1.36e-18,3;CL:0000239,1.14e-15,6;CL:0000677,1.14e-15,6;CL:0000584,1.14e-15,6;CL:0000223,8.17e-14,20;CL:0000075,1.79e-13,7;CL:0000473,2.05e-08,7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!3.25e-59!15;UBERON:0001242!7.42e-50!13;UBERON:0000060!7.42e-50!13;UBERON:0001262!7.42e-50!13;UBERON:0004786!7.42e-50!13;UBERON:0003350!8.91e-41!9;UBERON:0004808!8.91e-41!9;UBERON:0001277!8.91e-41!9;UBERON:0004923!2.81e-36!24;UBERON:0000485!3.60e-33!11;UBERON:0000160!5.65e-19!43;UBERON:0000331!1.09e-14!3;UBERON:0002116!1.09e-14!3;UBERON:0001204!1.09e-14!3;UBERON:0001168!1.09e-14!3;UBERON:0005409!3.02e-13!59;UBERON:0001962!9.28e-11!2;UBERON:0001961!9.28e-11!2;UBERON:0001744!9.28e-11!2;UBERON:0000064!2.35e-08!99;UBERON:0002465!1.90e-07!3;UBERON:0001007!6.76e-07!128;UBERON:0001555!6.76e-07!128;UBERON:0007026!6.76e-07!128;UBERON:0004119!9.46e-07!130;UBERON:0000925!9.46e-07!130;UBERON:0006595!9.46e-07!130 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,1.10e-54,15;UBERON:0001242,1.39e-43,13;UBERON:0001262,1.39e-43,13;UBERON:0004786,1.39e-43,13;UBERON:0004923,9.90e-34,24;UBERON:0003350,2.70e-31,9;UBERON:0004808,2.70e-31,9;UBERON:0001277,2.70e-31,9;UBERON:0000485,1.58e-25,11;UBERON:0000331,6.00e-18,3;UBERON:0002116,6.00e-18,3;UBERON:0001204,6.00e-18,3;UBERON:0001168,6.00e-18,3;UBERON:0000160,1.12e-17,31;UBERON:0002108,1.28e-13,4;UBERON:0001962,4.84e-13,2;UBERON:0001961,4.84e-13,2;UBERON:0001744,4.84e-13,2;UBERON:0005409,2.90e-11,47;UBERON:0002465,5.41e-09,3;UBERON:0003199,2.79e-07,1 | |||
|phase1_expression=0,0.697950815278722,0.454999239389536,1.20985684522732,1.50268718983904,3.69334398206158,9.34450562382103,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.75972722056264,4.35877634027623,3.44539178469012,11.630573896295,13.3592164265251,4.56056206695297,1.51218077855958,1.55211357458713,0,0,0,1.73310971850765,24.4364928676984,3.87921776898501,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510914110417183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.264450566663544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p1@AY761184 | |||
}} |
Latest revision as of 20:01, 1 October 2015
Short description: | p1@AY761184 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_AY761184_5end |
Coexpression cluster: | MCL_coexpression_mm9:58 |
Association with transcript: | 0bp_to_ENSMUST00000071886, NM_001007582, uc009lbw.2_5end |
EntrezGene: | AY761184 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 2.70e-31 | 9 |
epithelial cell of alimentary canal | 2.70e-31 | 9 |
epithelial cell | 1.48e-22 | 25 |
M cell of gut | 6.83e-19 | 3 |
endo-epithelial cell | 1.35e-18 | 15 |
intestinal crypt stem cell | 1.36e-18 | 3 |
brush border epithelial cell | 1.14e-15 | 6 |
gut absorptive cell | 1.14e-15 | 6 |
enterocyte | 1.14e-15 | 6 |
endodermal cell | 8.17e-14 | 20 |
columnar/cuboidal epithelial cell | 1.79e-13 | 7 |
defensive cell | 2.05e-08 | 7 |
Ontology term | p-value | n |
---|---|---|
mucosa | 1.10e-54 | 15 |
intestinal mucosa | 1.39e-43 | 13 |
wall of intestine | 1.39e-43 | 13 |
gastrointestinal system mucosa | 1.39e-43 | 13 |
organ component layer | 9.90e-34 | 24 |
epithelium of mucosa | 2.70e-31 | 9 |
gastrointestinal system epithelium | 2.70e-31 | 9 |
intestinal epithelium | 2.70e-31 | 9 |
simple columnar epithelium | 1.58e-25 | 11 |
ileal mucosa | 6.00e-18 | 3 |
ileum | 6.00e-18 | 3 |
mucosa of small intestine | 6.00e-18 | 3 |
wall of small intestine | 6.00e-18 | 3 |
intestine | 1.12e-17 | 31 |
small intestine | 1.28e-13 | 4 |
gut-associated lymphoid tissue | 4.84e-13 | 2 |
mucosa-associated lymphoid tissue | 4.84e-13 | 2 |
lymphoid tissue | 4.84e-13 | 2 |
gastrointestinal system | 2.90e-11 | 47 |
lymphoid system | 5.41e-09 | 3 |
egg chamber | 2.79e-07 | 1 |