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FFCP PHASE1:Mm9::chr13:3610228..3610244,-: Difference between revisions

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(Created page with "{{FFCP |id=chr13:3610228..3610244,- |short_description=p7@BC016423 |description=CAGE_peak_7_at_BC016423_5end |association_with_transcript=109bp_to_ENSMUST00000096069,ENSMU...")
 
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{{FFCP
{{FFCP
|id=chr13:3610228..3610244,-
|DHSsupport=NA
|short_description=p7@BC016423
|DPIdataset=NA
|description=CAGE_peak_7_at_BC016423_5end
|association_with_transcript=109bp_to_ENSMUST00000096069,ENSMUST00000110712,NM_134063,uc007pix.1,uc007piy.1_5end
|EntrezGene=105203
|EntrezGene=105203
|HGNC=
|HGNC=
|MCL_coexpression_id=266
|TSSclassifier=NA
|UniProt=Q5DTT3,E9PYT9,Q3TAG2
|UniProt=Q5DTT3,E9PYT9,Q3TAG2
|association_with_transcript=109bp_to_ENSMUST00000096069,ENSMUST00000110712,NM_134063,uc007pix.1,uc007piy.1_5end
|cluster_id=chr13:3610228..3610244,-
|description=CAGE_peak_7_at_BC016423_5end
|id=chr13:3610228..3610244,-
|ontology_enrichment_celltype=CL:0000791!3.68e-07!9;CL:0000789!3.68e-07!9;CL:0002420!3.68e-07!9;CL:0002419!3.68e-07!9;CL:0000790!3.68e-07!9
|ontology_enrichment_celltype_v019_2=CL:0000791,6.07e-11,9;CL:0000789,6.07e-11,9;CL:0002420,6.07e-11,9;CL:0002419,6.07e-11,9;CL:0000790,6.07e-11,9;CL:0000988,1.08e-10,32;CL:0002032,1.08e-10,32;CL:0000037,1.08e-10,32;CL:0000837,1.08e-10,32;CL:0000624,6.71e-10,8;CL:0000838,1.71e-09,12;CL:0000542,1.68e-08,13;CL:0000051,1.68e-08,13;CL:0000084,2.08e-08,11;CL:0000827,2.08e-08,11;CL:0002031,4.02e-08,25;CL:0000893,7.32e-08,6;CL:0002489,7.32e-08,6;CL:0000898,7.32e-08,6;CL:0000809,7.32e-08,6;CL:0000810,7.32e-08,6;CL:0000895,7.32e-08,6;CL:0000808,7.32e-08,6;CL:0000894,7.32e-08,6;CL:0000806,7.32e-08,6;CL:0000807,7.32e-08,6;CL:0000805,7.32e-08,6;CL:0002425,7.32e-08,6;CL:0002436,7.32e-08,6;CL:0002427,7.32e-08,6;CL:0002428,7.32e-08,6;CL:0002429,7.32e-08,6;CL:0002433,7.32e-08,6;CL:0002431,7.32e-08,6;CL:0002432,7.32e-08,6;CL:0002320,5.48e-07,46;CL:0000134,5.48e-07,46
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004177!3.48e-08!29;UBERON:0002370!1.15e-07!23;UBERON:0000974!1.15e-07!23;UBERON:0004807!1.15e-07!23;UBERON:0005058!1.15e-07!23;UBERON:0003351!1.15e-07!23;UBERON:0009113!1.15e-07!23;UBERON:0003295!1.15e-07!23;UBERON:0009722!1.15e-07!23;UBERON:0005562!1.15e-07!23;UBERON:0007690!1.15e-07!23;UBERON:0002193!1.51e-07!48;UBERON:0003408!1.66e-07!24;UBERON:0006562!6.15e-07!24;UBERON:0001557!6.15e-07!24;UBERON:0001042!6.15e-07!24;UBERON:0008814!6.15e-07!24;UBERON:0009145!6.15e-07!24;UBERON:0002390!7.73e-07!45;UBERON:0003061!7.73e-07!45
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.88e-13,45;UBERON:0003061,1.88e-13,45;UBERON:0002193,2.47e-13,48;UBERON:0002405,2.47e-13,48;UBERON:0004177,1.91e-12,29;UBERON:0005057,1.91e-12,29;UBERON:0002370,2.73e-11,23;UBERON:0000974,2.73e-11,23;UBERON:0004807,2.73e-11,23;UBERON:0005058,2.73e-11,23;UBERON:0003351,2.73e-11,23;UBERON:0009113,2.73e-11,23;UBERON:0003295,2.73e-11,23;UBERON:0009722,2.73e-11,23;UBERON:0005562,2.73e-11,23;UBERON:0007690,2.73e-11,23;UBERON:0006562,1.43e-10,24;UBERON:0003408,1.43e-10,24;UBERON:0001557,1.43e-10,24;UBERON:0001042,1.43e-10,24;UBERON:0008814,1.43e-10,24;UBERON:0009145,1.43e-10,24;UBERON:0000077,4.89e-10,35;UBERON:0000153,1.20e-09,43;UBERON:0003081,3.76e-09,87;UBERON:0000072,9.34e-09,27;UBERON:0007811,1.30e-08,36;UBERON:0000926,3.19e-07,120;UBERON:0004120,3.19e-07,120;UBERON:0006603,3.19e-07,120;UBERON:0002384,5.48e-07,46
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|phase1_expression=0.80074423552397,1.04692622291808,0,0.90739263392049,0.500895729946347,0.839396359559449,1.16806320297763,2.1950964985068,16.3314917695933,13.3416780003536,2.91070545983358,3.66951931378547,2.56801094896809,2.09808965805594,1.99865857089398,2.02475267389826,0.699561878128147,5.99378114180652,6.58149281307546,2.97072756258621,1.36069264241712,0.297872853602656,0.783599367416806,0.799962113967033,0.91763712426868,0.57423196411502,1.29228598847722,0.215471232685889,0.380046838912748,0.252030129759931,0.443461021310609,0,0,0,0.577703239502549,0,0.612508068787107,0,0,0.523523743973798,0.588231488031014,0,0,0.377690453926732,0.202753862439029,0.367093504323363,0,0.218025156380447,0,0,0,0,12.5836954543302,6.5282592781021,3.02484419228218,1.28629718017973,0.286533439938757,0,0.404632921719196,0.528990979272033,0,0.338844532069132,0,0,0,0,0,0,0.207379224616955,0.405017814995072,0.210324961351382,0.571301968807607,0.441737081903227,0.367472397644862,0.287536413054709,0,1.10115880999389,0.893811366596314,0.46081959976873,0.659431438650969,0.731901148819277,0,0.558365998002762,1.12552522006336,0.30559649555362,0.883885756421003,0.996601765593721,0.931997229126503,0.605809546665472,0.302286240427142,0.869593466105033,1.72084775396277,0.679971333707751,0,0,0.448026887097336,0.421333260395256,0.852151612890289,0.779358013808606,1.41335829804136,2.25349471642689,2.56652954828636,2.54805239706646,7.11066703153331,0.432982082022428,0.760079596425296,0,0.22836775943812,8.54495016035667,0.29688427812965,0.520455980298408,0,0.691846491768175,0.60289056221049,0.705532242814229,0.251333182659351,0.247194967734374,1.73519228303894,0,0.485300549842228,1.32504911076236,0.969750506270444,0,0.292780797011547,0.209446706813455,0.766371165625774,1.07833612055328,4.19931911695385,1.39777249780371,0.748953197024114,0.457500602818626,1.50785222535437,0.347648640384553,1.02286182932132,0,1.1356888414743,0.81471491080253,1.36847667671102,0.252722758433675,0.420883711772948,1.43132487258974,0.919608417733892,0.720248519221397,1.05493372485001,0.748401490664606,1.40925092313335,0.374806898238915,0.776110112217047,0.646703978798527,1.32374256117473,1.40760899331159,1.53437012699302,1.94633074457919,0,0.411564272815887,0.59710280045548,1.40442637462647,1.02939162845886,1.13665399758237,0.414251545071004,0.938104239924385,0.180062061461015,0.946978942340841,0.590292695242212,0.462801338662135,0,0,0.700592054203017,0.329119699826961,0.492502392237286,0.486412857275134,0.438599962275997,1.3173006917463,0.536825675041487,0.841159794256509,0.308713837137853,0.330418782983798,0.528901133327089,0,1.62565670302307,0.38660238396628,0.605050573870028,0.22237804384487,0.190225626112559,0,0.329397909448022,0.754005626400808,0.397912944082302,0.779856348476481,0.898819408654221,0.432276099749388,0.199141273254367,0.189667900953082,0.571242563048644,0,0.407302655690628,0.193952487167626,0.561086559122548,0.505892296994058,0.590440591918409,0,0.740382983530803,0.592905254174298,0.166845105716094,0.393117990226406,0,0.405720242777006,0,0,0.287696137450811,0.324270453550071,0.549122826376163,1.43768206527355,0.372140947668503,0.312037673114561,0.252578877947112,0.717589654087649,0.482443521363367,0.554259570499814,0.37898282354097,0.651859905768103,0.169745085775188,0.704070744865506,0.335012514883631,0.714130922658041,1.56106918286239,0.630540576424764,0.44292937929755,0.956728611944923,0.655453258862952,1.03610989119537,1.15719246865209,0,0.54390568381871,0,1.65562047782839,0.481651769963376,0.820481806145422,0.163934945376675,1.00988370881749,0.94652465824877,0.390438744296638,0.215423397732799,1.19484398976276,0.222798674082394,0.283076530788832,0.809621403349789,1.16902343164525,0.395287777946524,0.321321316421807,0.425820255624806,0.35613120733451,0.651547837414304,0.824850614862677,0,0,0.302323556964751,0.377210159511796,0.885905678642318,0.307435147943927,1.80899805217755,1.45413491791002,1.06949213515416,0.948110273807448,0,0,0.340439605753788,1.08036656418786,0.258717367565509,0,1.24138163549592,0.356737635204141,0.493647061806363,0,0.23467170806371,1.27099242518292,0.441056796109924,0.32977250588296,1.29171541356724,0.603129249281559,0.119372344003136,0.820704498725306,0.291480836629851,0.927126510052548,1.53783792718067,1.03193433981611,0.555583582109135,0.188368457004691,1.6403307326523,1.60144721244566,1.18984900995699,0.279902904647316,1.65839968565309,0,0.632671987162271,1.42323626988794,0.324016022465404,0.836353184057875,0,0.269728692769641,0.330613822901344,0.523511883968059,0.259229946583586,0.621339313086926,0.56369293868419,0.598066184175915,0.496375471371293,0.972255941720238,0.516639293910924,0.844780627453891,1.05621514781179,1.43224823328345,3.46035836604846,2.65742532908607,2.59227005632079,1.58005560314089,0.405450430580328,0.308132871494482,0.51968329191118,0.358053391334963,0.79472541912506,1.20195449519969,1.18151621739662,1.00966449948148,1.295515713135,1.41156659191577,1.65678397257579,1.6356013078856,1.63627663054197,0.226730383615211,0.443971906748129,0.897138566094757,0.839423081820392,0.579568782096571,0.187682475451182,1.46521299413812,0.428736758158132,1.50471631210609,1.6942555278512,0.920650473014354,0,0,0,1.5107877947794,1.35004500046361,0.900642406448441,1.35942722695261,1.03552062350364,1.3492355185943,1.59609949360412,1.02440163452481,0.729320151204882,1.25767897576789,0.551530525350042,0.888986911206461,0.824140228955577,0.320919209591815,0.505394423527595,0.760437899670719,0.565879024158229,0.655490552289177,0.89635213366817,0.574354689556133,0.952587382566147,0.811190281613988,0.77163688185482,0,0.735994600671987,0.342869252385415,0.70990322463735,0.238436189947321,0.726732083161643,0.470546902076653,0.507687647350059,0.182927972872773,0.263069711437843,1.35804113845862,0.561142271657738,0.474540072496697,0.492522411877817,1.63692417267876,1.08455788830176,0.771626443924566,0.249810577937946,0.467863216890817,0.859484216193193,0.765153328275374,0.441182838239031,0.463735671240843
|short_description=p7@BC016423
}}
}}

Latest revision as of 13:22, 1 October 2015

Short description:p7@BC016423
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_7_at_BC016423_5end
Coexpression cluster:MCL_coexpression_mm9:266
Association with transcript: 109bp_to_ENSMUST00000096069, ENSMUST00000110712, NM_134063, uc007pix.1, uc007piy.1_5end
EntrezGene:BC016423
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p7@BC016423

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.80
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I51.05
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.91
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.84
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I81.17
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E92.20
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E716.33
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F213.34
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E62.91
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F13.67
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E42.57
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E82.10
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A12.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A32.02
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A25.99
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A46.58
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A62.97
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.36
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.30
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.78
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.80
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.92
GP2+ M cell, pool1.CNhs13228.11845-124H90.57
GP2+ M cell, pool2.CNhs13231.11846-124I11.29
GP2+ M cell, pool3.CNhs13240.11847-124I20.22
Ileum epithelium, pool1.CNhs13199.10252-104B90.38
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.44
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.58
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.61
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.52
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.59
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.38
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.20
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.37
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A212.58
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I96.53
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A13.02
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.29
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.40
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.21
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.41
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.44
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.37
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.29
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.89
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.46
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.66
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.73
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.56
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.13
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.31
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.88
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.93
Mouse Schwann, donor1.CNhs12507.11728-123D90.61
Mouse Schwann, donor2.CNhs12573.11746-123F90.30
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.87
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F71.72
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.45
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.42
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.85
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.78
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I81.41
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G62.25
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H12.57
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.43
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.76
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.23
accessory axillary lymph node, adult.CNhs10475.1063-29H98.54
adrenal gland, adult.CNhs10508.49-24D70.30
adrenal gland, embryo E14.CNhs11038.406-44C50.52
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.69
adrenal gland, embryo E18.CNhs11026.1262-18F50.60
adrenal gland, neonate N00.CNhs11191.1311-23C10.71
adrenal gland, neonate N25.CNhs11223.1377-27I30.25
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H11.74
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.49
bone (os femoris), neonate N16.CNhs11225.1525-43A61.33
bone (os femoris), neonate N20.CNhs11195.1350-25C30.97
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.29
cerebellum, neonate N30.CNhs11135.1395-42I20.21
colon, adult.CNhs10468.36-18H70.77
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C71.08
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D14.20
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D41.40
corpora quadrigemina, adult.CNhs10501.16-22A40.75
corpus striatum, adult.CNhs10487.19-21D80.46
corpus striatum, neonate N00.CNhs11226.630-43F11.51
cortex, adult.CNhs10473.12-14D50.35
cortex, neonate N30.CNhs11107.1392-42F21.02
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B21.14
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.81
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.37
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G40.42
eyeball, embryo E12.CNhs11016.345-16C61.43
eyeball, embryo E14.CNhs10521.399-16E20.92
eyeball, embryo E15.CNhs10593.426-16C90.72
eyeball, embryo E17.CNhs11023.1261-18D41.05
eyeball, neonate N00.CNhs11207.633-15C60.75
eyeball, neonate N01.CNhs11140.1532-43E71.41
eyeball, neonate N02.CNhs11205.1551-44G80.37
eyeball, neonate N16.CNhs11188.777-19A20.78
forelimb, embryo E11.CNhs10596.335-25E20.65
forelimb, embryo E12.CNhs10600.359-14H21.32
forelimb, embryo E13.CNhs10589.384-1E21.41
forelimb, embryo E14.CNhs10577.413-26A81.53
forelimb, embryo E15.CNhs11007.437-20E71.95
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.41
gonad, embryo E13.CNhs11044.1564-45I60.60
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C81.40
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D21.03
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D51.14
heart, embryo E11.CNhs10586.331-24E90.41
heart, embryo E12.CNhs11015.353-12F50.94
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.95
heart, embryo E15.CNhs11017.431-16C80.59
heart, embryo E16.CNhs11021.457-17C60.46
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.70
heart, neonate N03.CNhs11221.1349-25I20.33
heart, neonate N10.CNhs11118.749-24G10.49
heart, neonate N16.CNhs11209.782-15G10.49
heart, neonate N20.CNhs11127.821-26I60.44
heart, neonate N25.CNhs11196.1351-25D31.32
heart, neonate N30.CNhs11202.1390-42D20.54
hippocampus, adult.CNhs10478.13-16E80.84
hippocampus, neonate N00.CNhs11228.627-43G10.31
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A30.53
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D51.63
intestine, embryo E15.CNhs10602.976-16D80.39
intestine, embryo E16.CNhs10585.463-22H40.61
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.33
intestine, neonate N06.CNhs11102.688-20B80.75
intestine, neonate N07.CNhs11095.720-20F20.40
intestine, neonate N10.CNhs11098.755-23A50.78
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E30.43
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.57
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.41
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.56
kidney, neonate N10.CNhs11206.758-6D50.51
kidney, neonate N20.CNhs11113.832-19I10.59
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.74
liver, adult pregnant day01.CNhs10466.508-5B20.59
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.39
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.41
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F40.32
liver, neonate N03.CNhs11123.1345-25G20.55
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.72
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B10.55
lung, embryo E12.CNhs10522.354-16G20.38
lung, embryo E14.CNhs10604.404-26F80.65
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.70
lung, embryo E17.CNhs10605.480-44A60.34
lung, embryo E18.CNhs10583.1287-20I60.71
lung, neonate N00.CNhs11224.640-42C61.56
lung, neonate N06.CNhs11212.683-20E50.63
lung, neonate N07.CNhs11111.715-19A30.44
lung, neonate N10.CNhs11219.750-23E60.96
lung, neonate N20.CNhs11109.822-18A40.66
lung, neonate N25.CNhs11119.1359-25C71.04
lung, neonate N30.CNhs11133.1394-42H21.16
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.54
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H21.66
medulla oblongata, adult.CNhs10477.17-12C20.48
medulla oblongata, neonate N30.CNhs11200.1396-42A30.82
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.16
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.01
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.95
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.19
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.81
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.17
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I90.32
ovary, adult.CNhs10507.91-2I70.43
ovary, embryo E18.CNhs11040.505-44H70.36
ovary, neonate N00.CNhs11217.1299-22I40.65
oviduct, adult pregnant day01.CNhs10500.988-6G60.82
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.38
pancreas, embryo E17.CNhs10599.1558-45G30.89
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G91.81
pancreas, neonate N01.CNhs11138.1531-43D71.45
pancreas, neonate N02.CNhs11139.1539-43D81.07
pancreas, neonate N16.CNhs11136.787-43B60.95
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E61.08
pituitary gland, embryo E13.CNhs11009.370-44C70.26
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B91.24
pituitary gland, embryo E16.CNhs11036.449-43F60.36
pituitary gland, embryo E17.CNhs11039.1265-44F50.49
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G31.27
prostate, adult.CNhs10470.859-1F80.44
skin, adult.CNhs10492.30-1C30.33
skin, neonate N00.CNhs11124.650-25G41.29
skin, neonate N03.CNhs11215.662-22H30.60
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.82
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C90.93
spleen, adult.CNhs10465.25-2G21.54
spleen, embryo E16.CNhs11035.461-43C11.03
spleen, embryo E18.CNhs11011.1271-21F20.56
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H11.64
spleen, neonate N25.CNhs11099.1354-25G31.60
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C61.19
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.28
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D31.66
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.63
stomach, embryo E15.CNhs10603.1252-16G81.42
stomach, embryo E16.CNhs11022.459-17D40.32
stomach, embryo E17.CNhs11006.1035-18D50.84
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.27
stomach, neonate N07.CNhs11210.718-18A90.33
stomach, neonate N25.CNhs11104.1355-25E40.52
stomach, neonate N30.CNhs11134.1386-42I10.26
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F50.60
testis, embryo E15.CNhs11034.443-27C50.50
testis, embryo E16.CNhs11033.470-26G50.97
testis, embryo E17.CNhs11029.486-18I50.52
testis, embryo E18.CNhs11027.503-18G50.84
testis, neonate N00.CNhs11189.1300-22B71.06
testis, neonate N07.CNhs11222.726-26I41.43
testis, neonate N10.CNhs11204.763-44D93.46
testis, neonate N20.CNhs11110.839-18H32.66
testis, neonate N30.CNhs11130.1391-42E22.59
thymus, adult.CNhs10471.38-12B51.58
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I20.31
thymus, embryo E16.CNhs11002.456-26C50.52
thymus, embryo E17.CNhs10581.478-18C10.36
thymus, embryo E18.CNhs10595.1273-19G40.79
thymus, neonate N02.CNhs11181.1541-43F81.20
thymus, neonate N03.CNhs11137.2104-43C71.18
thymus, neonate N06.CNhs11197.681-26C41.01
thymus, neonate N07.CNhs11211.713-19D31.30
thymus, neonate N10.CNhs11194.748-24E41.41
thymus, neonate N20.CNhs11186.820-7A21.66
thymus, neonate N25.CNhs11125.1362-25G71.64
thymus, neonate N30.CNhs11132.1393-42G21.64
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.44
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.90
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.84
urinary bladder, adult.CNhs10481.879-12E40.58
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E51.47
vagina, adult.CNhs10502.89-27D50.43
vesicular gland, adult.CNhs10491.51-27F81.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.69
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.92
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A51.51
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A61.35
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.90
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A81.36
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.04
whole body, embryo E11.CNhs11014.324-5I81.35
whole body, embryo E12.CNhs10587.857-27C91.60
whole body, embryo E13.CNhs10512.372-23H21.02
whole body, embryo E14.5.CNhs10578.420-27D20.73
whole body, embryo E14.CNhs10519.395-14B11.26
whole body, embryo E16.CNhs10514.453-14F20.55
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.57
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.66
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.90
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.57
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.81
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.77
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.74
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.71
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.36
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.49
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.64
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.08
whole body, embryo E17.5.CNhs10513.490-9F90.77
whole body, embryo E17.CNhs10517.475-3I50.25
whole body, embryo E18.CNhs10516.493-3B30.47
whole body, neonate N00.CNhs10525.657-19C20.86
whole body, neonate N01.CNhs10576.659-23C60.77
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B40.46





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
mature alpha-beta T cell6.07e-119
alpha-beta T cell6.07e-119
immature T cell6.07e-119
mature T cell6.07e-119
immature alpha-beta T cell6.07e-119
hematopoietic cell1.08e-1032
hematopoietic oligopotent progenitor cell1.08e-1032
hematopoietic stem cell1.08e-1032
hematopoietic multipotent progenitor cell1.08e-1032
CD4-positive, alpha-beta T cell6.71e-108
lymphoid lineage restricted progenitor cell1.71e-0912
lymphocyte1.68e-0813
common lymphoid progenitor1.68e-0813
T cell2.08e-0811
pro-T cell2.08e-0811
hematopoietic lineage restricted progenitor cell4.02e-0825
thymocyte7.32e-086
double negative thymocyte7.32e-086
naive T cell7.32e-086
double-positive, alpha-beta thymocyte7.32e-086
CD4-positive, alpha-beta thymocyte7.32e-086
naive thymus-derived CD4-positive, alpha-beta T cell7.32e-086
DN4 thymocyte7.32e-086
DN1 thymic pro-T cell7.32e-086
DN2 thymocyte7.32e-086
DN3 thymocyte7.32e-086
immature single positive thymocyte7.32e-086
early T lineage precursor7.32e-086
mature CD4 single-positive thymocyte7.32e-086
resting double-positive thymocyte7.32e-086
double-positive blast7.32e-086
CD69-positive double-positive thymocyte7.32e-086
CD69-positive, CD4-positive single-positive thymocyte7.32e-086
CD4-positive, CD8-intermediate double-positive thymocyte7.32e-086
CD24-positive, CD4 single-positive thymocyte7.32e-086
connective tissue cell5.48e-0746
mesenchymal cell5.48e-0746

Uber anatomy
Ontology termp-valuen
hematopoietic system1.88e-1345
blood island1.88e-1345
hemolymphoid system2.47e-1348
immune system2.47e-1348
hemopoietic organ1.91e-1229
immune organ1.91e-1229
thymus2.73e-1123
neck2.73e-1123
respiratory system epithelium2.73e-1123
hemolymphoid system gland2.73e-1123
pharyngeal epithelium2.73e-1123
thymic region2.73e-1123
pharyngeal gland2.73e-1123
entire pharyngeal arch endoderm2.73e-1123
thymus primordium2.73e-1123
early pharyngeal endoderm2.73e-1123
pharynx1.43e-1024
gland of gut1.43e-1024
upper respiratory tract1.43e-1024
chordate pharynx1.43e-1024
pharyngeal arch system1.43e-1024
pharyngeal region of foregut1.43e-1024
mixed endoderm/mesoderm-derived structure4.89e-1035
anterior region of body1.20e-0943
lateral plate mesoderm3.76e-0987
segment of respiratory tract9.34e-0927
craniocervical region1.30e-0836
mesoderm3.19e-07120
mesoderm-derived structure3.19e-07120
presumptive mesoderm3.19e-07120
connective tissue5.48e-0746
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