FFCP PHASE1:Mm9::chr17:75578115..75578134,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr17:75578115..75578134,+
|short_description=p9@Ltbp1
|description=CAGE_peak_9_at_Ltbp1_5end
|association_with_transcript=-15bp_to_ENSMUST00000112516,ENSMUST00...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=268977 | |EntrezGene=268977 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=230 | |||
|TSSclassifier=NA | |||
|UniProt=Q8CG19,B1B1E2 | |UniProt=Q8CG19,B1B1E2 | ||
|association_with_transcript=-15bp_to_ENSMUST00000112516,ENSMUST00000135447,NM_206958_5end | |||
|cluster_id=chr17:75578115..75578134,+ | |||
|description=CAGE_peak_9_at_Ltbp1_5end | |||
|id=chr17:75578115..75578134,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000680,1.10e-09,6;CL:0000187,1.10e-09,6;CL:0000056,1.10e-09,6;CL:0000192,2.15e-08,3;CL:0000359,2.15e-08,3;CL:0002539,2.15e-08,3;CL:0000514,2.15e-08,3;CL:0000222,3.11e-08,7;CL:0000068,1.33e-07,3;CL:0002202,1.33e-07,3;CL:0000069,1.33e-07,3;CL:0002632,1.33e-07,3;CL:0002368,1.33e-07,3;CL:0000307,1.33e-07,3;CL:0000377,1.33e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005178!2.84e-07!17;UBERON:0005181!2.84e-07!17;UBERON:0002224!2.84e-07!17;UBERON:0000915!2.84e-07!17;UBERON:0008947!2.84e-07!17;UBERON:0003258!2.84e-07!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005178,4.67e-14,17;UBERON:0005181,4.67e-14,17;UBERON:0002224,4.67e-14,17;UBERON:0000915,4.67e-14,17;UBERON:0008947,4.67e-14,17;UBERON:0003258,4.67e-14,17;UBERON:0000947,1.32e-10,4;UBERON:0001637,1.32e-10,4;UBERON:0004573,1.32e-10,4;UBERON:0003509,1.32e-10,4;UBERON:0004571,1.32e-10,4;UBERON:0010191,1.32e-10,4;UBERON:0004572,1.32e-10,4;UBERON:0002048,4.28e-09,14;UBERON:0000117,4.28e-09,14;UBERON:0000171,4.28e-09,14;UBERON:0000170,4.28e-09,14;UBERON:0005597,4.28e-09,14;UBERON:0000118,4.28e-09,14;UBERON:0000055,1.89e-08,5;UBERON:0007500,1.89e-08,5;UBERON:0001981,1.89e-08,5;UBERON:0002049,1.89e-08,5;UBERON:0007798,1.89e-08,5;UBERON:0004537,1.89e-08,5;UBERON:0006965,1.89e-08,5;UBERON:0001135,2.15e-08,3;UBERON:0004237,2.15e-08,3;UBERON:0004695,2.15e-08,3;UBERON:0002111,2.15e-08,3;UBERON:0004178,2.15e-08,3;UBERON:0003126,1.33e-07,3;UBERON:0001005,1.33e-07,3;UBERON:0007196,1.33e-07,3;UBERON:0001558,1.33e-07,3;UBERON:0005153,3.11e-07,17 | |||
|phase1_expression=0.640595388419176,0,0.454999239389536,0,0,0,0,0.258246646883153,0,0,0,0,0,0,0,0.404950534779652,0,0,0,0.42438965179803,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,19.1363163322877,17.8423398946346,30.8358543631625,0,0.436050312760893,2.41654801007919,3.69416808241138,0.699932108126813,0,0,0,0,1.80081605225163,1.14613375975503,0.515672092277442,0,0,0,0.338844532069132,0.889294796111139,0,0,0,0,0,0,0,0,0.571301968807607,0.441737081903227,0,0,0,1.10115880999389,0,0.46081959976873,0,0,0,0,1.12552522006336,0.15279824777681,0.589257170947335,0.711858403995515,0,0.075726193333184,0.68014404096107,0.289864488701678,0,0,0,0,0,0.421333260395256,1.1930122580464,0.779358013808606,1.7666978725517,0.14084341977668,1.28326477414318,2.54805239706646,0,2.16491041011214,1.77351905832569,5.05524445014783,0.45673551887624,1.29468941823586,0.148442139064825,0,0.304465478312141,0.461230994512117,0,0.352766121407114,0,0.494389935468748,5.63937491987655,0,0.647067399789637,0.441683036920787,0.484875253135222,0,0,0,0,0,0,0,0,0.457500602818626,0,0.347648640384553,2.04572365864264,0,0,0.407357455401265,0.870848794270651,0,0.631325567659422,0.130120442962704,0,0.180062129805349,0.90422890701429,1.15662048557257,0.896796041993948,0.843315521037559,2.32833033665114,0,0,0.175951124163949,1.09597866213787,1.66828349535359,0.348252166522167,0.61734640922383,0,0,0,0,0,0,0,0.23674473558521,0,0.154267112887378,0.697601834251224,0.804820204198858,0.350296027101508,0.16455984991348,0.985004784474571,0.486412857275134,0.438599962275997,0.878200461164203,0.671032093801859,0.210289948564127,0.102904612379284,0.330418782983798,0,0.213288250535234,0.232236671860439,0,0,0.22237804384487,0,0.474529061544512,0.329397909448022,0,0.397912944082302,0.38992817423824,0,0.216138049874694,0.199141273254367,0.189667900953082,0.114248512609729,0,0.814605311381257,0.387904974335251,0.49095073923223,1.96033265085198,2.06654207171443,1.09899109488962,0.863780147452604,0,0,0,0,0,0,0,0,0.162135226775035,0.549122826376163,0,0.744281895337007,0,0,0.179397413521912,0,3.32555742299888,0.189491411770485,0.162964976442026,0.509235257325564,0.704070744865506,0,0.714130922658041,2.14647012643579,1.26108115284953,1.7717175171902,1.59454768657487,2.62181303545181,2.24490476425664,2.16973587872267,0,0,0,0,0.160550589987792,0.234423373184406,0.819674726883377,0.757412781613119,0,0.780877488593277,0.215423397732799,0.955875191810208,0.891194696329576,0.849229592366497,0.404810701674894,1.75353514746787,0,0.321321316421807,0.709700426041343,0.178065603667255,0.488660878060728,1.15479086080775,0,0,0,0.377210159511796,0.295301892880773,0,0,0.727067458955011,0,0.316036757935816,0,1.03135543248187,0.340439605753788,0,0,0,0,0.356737635204141,0.164549020602121,0.304464949114599,0.704015124191131,0.21183207086382,0,0.98931751764888,0.645857706783622,0.422190474497091,0.238744688006273,0.164140899745061,0.291480836629851,0.18542530201051,0.854354403989263,0.206386867963223,0,0,0.27338845544205,0.228778173206523,0,0,0,0,0,0,0.216010681643603,0.627264888043406,0.218362563746178,1.07891477107857,2.0663363931334,1.83229159388821,0.518459893167171,0,0,0,0.330916980914195,0,0.387479470433193,0.168956125490778,0.469428954583016,1.17183946359555,0.734015410979976,0,0.576060012515731,0.632022241256357,0,0.205421914329655,0.129920822977795,0,0.39736270956253,0.120195449519969,0.147689527174577,0,0.15241361331,0,0.194915761479505,0,0.116876902181569,0.906921534460845,0,0,0.167884616364078,0.965947970160952,0.563047426353546,0.549454872801795,1.07184189539533,0,0,0,0.572895513439397,0.859265911718438,1.37016503954128,0.755393897389701,0,0.900642406448441,0,0.51776031175182,0,0,0.170733605754134,0.486213434136588,0.209613162627982,0.367687016900028,0,0.412070114477788,0,0.252697211763798,0.760437899670719,0,0.749132059759059,0.192075457214608,0.114870937911227,0,0.231768651889711,0,0,0.735994600671987,0.685738504770831,0.354951612318675,0.238436189947321,0.290692833264657,0.470546902076653,0.423073039458382,0.548783918618318,0.789209134313529,0.679020569229309,0,0.355905054372522,0.197008964751127,0,0.464810523557898,0.385813221962283,0.749431733813838,0.935726433781634,0,0.57386499620653,0.220591419119515,0.463735671240843 | |phase1_expression=0.640595388419176,0,0.454999239389536,0,0,0,0,0.258246646883153,0,0,0,0,0,0,0,0.404950534779652,0,0,0,0.42438965179803,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,19.1363163322877,17.8423398946346,30.8358543631625,0,0.436050312760893,2.41654801007919,3.69416808241138,0.699932108126813,0,0,0,0,1.80081605225163,1.14613375975503,0.515672092277442,0,0,0,0.338844532069132,0.889294796111139,0,0,0,0,0,0,0,0,0.571301968807607,0.441737081903227,0,0,0,1.10115880999389,0,0.46081959976873,0,0,0,0,1.12552522006336,0.15279824777681,0.589257170947335,0.711858403995515,0,0.075726193333184,0.68014404096107,0.289864488701678,0,0,0,0,0,0.421333260395256,1.1930122580464,0.779358013808606,1.7666978725517,0.14084341977668,1.28326477414318,2.54805239706646,0,2.16491041011214,1.77351905832569,5.05524445014783,0.45673551887624,1.29468941823586,0.148442139064825,0,0.304465478312141,0.461230994512117,0,0.352766121407114,0,0.494389935468748,5.63937491987655,0,0.647067399789637,0.441683036920787,0.484875253135222,0,0,0,0,0,0,0,0,0.457500602818626,0,0.347648640384553,2.04572365864264,0,0,0.407357455401265,0.870848794270651,0,0.631325567659422,0.130120442962704,0,0.180062129805349,0.90422890701429,1.15662048557257,0.896796041993948,0.843315521037559,2.32833033665114,0,0,0.175951124163949,1.09597866213787,1.66828349535359,0.348252166522167,0.61734640922383,0,0,0,0,0,0,0,0.23674473558521,0,0.154267112887378,0.697601834251224,0.804820204198858,0.350296027101508,0.16455984991348,0.985004784474571,0.486412857275134,0.438599962275997,0.878200461164203,0.671032093801859,0.210289948564127,0.102904612379284,0.330418782983798,0,0.213288250535234,0.232236671860439,0,0,0.22237804384487,0,0.474529061544512,0.329397909448022,0,0.397912944082302,0.38992817423824,0,0.216138049874694,0.199141273254367,0.189667900953082,0.114248512609729,0,0.814605311381257,0.387904974335251,0.49095073923223,1.96033265085198,2.06654207171443,1.09899109488962,0.863780147452604,0,0,0,0,0,0,0,0,0.162135226775035,0.549122826376163,0,0.744281895337007,0,0,0.179397413521912,0,3.32555742299888,0.189491411770485,0.162964976442026,0.509235257325564,0.704070744865506,0,0.714130922658041,2.14647012643579,1.26108115284953,1.7717175171902,1.59454768657487,2.62181303545181,2.24490476425664,2.16973587872267,0,0,0,0,0.160550589987792,0.234423373184406,0.819674726883377,0.757412781613119,0,0.780877488593277,0.215423397732799,0.955875191810208,0.891194696329576,0.849229592366497,0.404810701674894,1.75353514746787,0,0.321321316421807,0.709700426041343,0.178065603667255,0.488660878060728,1.15479086080775,0,0,0,0.377210159511796,0.295301892880773,0,0,0.727067458955011,0,0.316036757935816,0,1.03135543248187,0.340439605753788,0,0,0,0,0.356737635204141,0.164549020602121,0.304464949114599,0.704015124191131,0.21183207086382,0,0.98931751764888,0.645857706783622,0.422190474497091,0.238744688006273,0.164140899745061,0.291480836629851,0.18542530201051,0.854354403989263,0.206386867963223,0,0,0.27338845544205,0.228778173206523,0,0,0,0,0,0,0.216010681643603,0.627264888043406,0.218362563746178,1.07891477107857,2.0663363931334,1.83229159388821,0.518459893167171,0,0,0,0.330916980914195,0,0.387479470433193,0.168956125490778,0.469428954583016,1.17183946359555,0.734015410979976,0,0.576060012515731,0.632022241256357,0,0.205421914329655,0.129920822977795,0,0.39736270956253,0.120195449519969,0.147689527174577,0,0.15241361331,0,0.194915761479505,0,0.116876902181569,0.906921534460845,0,0,0.167884616364078,0.965947970160952,0.563047426353546,0.549454872801795,1.07184189539533,0,0,0,0.572895513439397,0.859265911718438,1.37016503954128,0.755393897389701,0,0.900642406448441,0,0.51776031175182,0,0,0.170733605754134,0.486213434136588,0.209613162627982,0.367687016900028,0,0.412070114477788,0,0.252697211763798,0.760437899670719,0,0.749132059759059,0.192075457214608,0.114870937911227,0,0.231768651889711,0,0,0.735994600671987,0.685738504770831,0.354951612318675,0.238436189947321,0.290692833264657,0.470546902076653,0.423073039458382,0.548783918618318,0.789209134313529,0.679020569229309,0,0.355905054372522,0.197008964751127,0,0.464810523557898,0.385813221962283,0.749431733813838,0.935726433781634,0,0.57386499620653,0.220591419119515,0.463735671240843 | ||
|short_description=p9@Ltbp1 | |||
}} | }} |
Latest revision as of 21:27, 26 September 2015
Short description: | p9@Ltbp1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_9_at_Ltbp1_5end |
Coexpression cluster: | MCL_coexpression_mm9:230 |
Association with transcript: | -15bp_to_ENSMUST00000112516, ENSMUST00000135447, NM_206958_5end |
EntrezGene: | Ltbp1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle precursor cell | 1.10e-09 | 6 |
muscle cell | 1.10e-09 | 6 |
myoblast | 1.10e-09 | 6 |
smooth muscle cell | 2.15e-08 | 3 |
vascular associated smooth muscle cell | 2.15e-08 | 3 |
aortic smooth muscle cell | 2.15e-08 | 3 |
smooth muscle myoblast | 2.15e-08 | 3 |
mesodermal cell | 3.11e-08 | 7 |
duct epithelial cell | 1.33e-07 | 3 |
epithelial cell of tracheobronchial tree | 1.33e-07 | 3 |
branched duct epithelial cell | 1.33e-07 | 3 |
epithelial cell of lower respiratory tract | 1.33e-07 | 3 |
respiratory epithelial cell | 1.33e-07 | 3 |
tracheal epithelial cell | 1.33e-07 | 3 |
tracheoblast | 1.33e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
thoracic cavity element | 4.67e-14 | 17 |
thoracic segment organ | 4.67e-14 | 17 |
thoracic cavity | 4.67e-14 | 17 |
thoracic segment of trunk | 4.67e-14 | 17 |
respiratory primordium | 4.67e-14 | 17 |
endoderm of foregut | 4.67e-14 | 17 |
aorta | 1.32e-10 | 4 |
artery | 1.32e-10 | 4 |
systemic artery | 1.32e-10 | 4 |
arterial blood vessel | 1.32e-10 | 4 |
systemic arterial system | 1.32e-10 | 4 |
aortic system | 1.32e-10 | 4 |
arterial system | 1.32e-10 | 4 |
lung | 4.28e-09 | 14 |
respiratory tube | 4.28e-09 | 14 |
respiration organ | 4.28e-09 | 14 |
pair of lungs | 4.28e-09 | 14 |
lung primordium | 4.28e-09 | 14 |
lung bud | 4.28e-09 | 14 |
vessel | 1.89e-08 | 5 |
epithelial tube open at both ends | 1.89e-08 | 5 |
blood vessel | 1.89e-08 | 5 |
vasculature | 1.89e-08 | 5 |
vascular system | 1.89e-08 | 5 |
blood vasculature | 1.89e-08 | 5 |
vascular cord | 1.89e-08 | 5 |
smooth muscle tissue | 2.15e-08 | 3 |
blood vessel smooth muscle | 2.15e-08 | 3 |
arterial system smooth muscle | 2.15e-08 | 3 |
artery smooth muscle tissue | 2.15e-08 | 3 |
aorta smooth muscle tissue | 2.15e-08 | 3 |
trachea | 1.33e-07 | 3 |
respiratory airway | 1.33e-07 | 3 |
tracheobronchial tree | 1.33e-07 | 3 |
lower respiratory tract | 1.33e-07 | 3 |
epithelial bud | 3.11e-07 | 17 |