FFCP PHASE1:Mm9::chr18:24762057..24762077,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr18:24762057..24762077,+
|short_description=p3@Elp2
|description=CAGE_peak_3_at_Elp2_5end
|association_with_transcript=-384bp_to_ENSMUST00000025120,ENSMUST000...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=58523 | |EntrezGene=58523 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=7 | |||
|TSSclassifier=NA | |||
|UniProt=Q91WG4,Q8C8Q3 | |UniProt=Q91WG4,Q8C8Q3 | ||
|association_with_transcript=-384bp_to_ENSMUST00000025120,ENSMUST00000115825,NM_021448,uc008egw.1,uc008egx.1,uc012baj.1_5end | |||
|cluster_id=chr18:24762057..24762077,+ | |||
|description=CAGE_peak_3_at_Elp2_5end | |||
|id=chr18:24762057..24762077,+ | |||
|ontology_enrichment_celltype=CL:0000838!2.68e-10!12;CL:0000084!1.42e-09!11;CL:0000827!1.42e-09!11;CL:0000542!5.58e-09!13;CL:0000051!5.58e-09!13;CL:0000738!7.41e-09!17;CL:0002087!7.41e-09!17;CL:0002031!1.25e-08!25;CL:0000988!1.53e-08!32;CL:0002032!1.53e-08!32;CL:0000037!1.53e-08!32;CL:0000566!1.53e-08!32;CL:0000837!1.53e-08!32;CL:0000791!2.39e-08!9;CL:0000789!2.39e-08!9;CL:0002420!2.39e-08!9;CL:0002419!2.39e-08!9;CL:0000790!2.39e-08!9;CL:0000624!1.40e-07!8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,1.66e-62,12;CL:0000542,1.25e-57,13;CL:0000051,1.25e-57,13;CL:0000791,1.21e-56,9;CL:0000789,1.21e-56,9;CL:0002420,1.21e-56,9;CL:0002419,1.21e-56,9;CL:0000790,1.21e-56,9;CL:0000084,1.32e-56,11;CL:0000827,1.32e-56,11;CL:0000624,2.15e-50,8;CL:0000738,7.46e-44,17;CL:0002087,7.46e-44,17;CL:0000893,2.29e-38,6;CL:0002489,2.29e-38,6;CL:0000898,2.29e-38,6;CL:0000809,2.29e-38,6;CL:0000810,2.29e-38,6;CL:0000895,2.29e-38,6;CL:0000808,2.29e-38,6;CL:0000894,2.29e-38,6;CL:0000806,2.29e-38,6;CL:0000807,2.29e-38,6;CL:0000805,2.29e-38,6;CL:0002425,2.29e-38,6;CL:0002436,2.29e-38,6;CL:0002427,2.29e-38,6;CL:0002428,2.29e-38,6;CL:0002429,2.29e-38,6;CL:0002433,2.29e-38,6;CL:0002431,2.29e-38,6;CL:0002432,2.29e-38,6;CL:0002031,1.68e-29,25;CL:0000988,3.74e-27,32;CL:0002032,3.74e-27,32;CL:0000037,3.74e-27,32;CL:0000837,3.74e-27,32;CL:0002320,6.84e-22,46;CL:0000134,6.84e-22,46;CL:0000219,1.85e-18,54;CL:0000723,2.18e-10,91;CL:0000048,2.18e-10,91;CL:0000034,1.18e-09,97;CL:0000625,8.50e-08,1;CL:0000213,1.33e-07,1;CL:0002078,1.33e-07,1;CL:0000115,1.33e-07,1;CL:0002262,1.33e-07,1;CL:1000398,1.33e-07,1;CL:0000945,2.05e-07,1;CL:0000236,2.05e-07,1;CL:0000826,2.05e-07,1;CL:0000815,2.74e-07,1;CL:0000792,2.74e-07,1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,6.84e-22,46;UBERON:0002370,7.98e-10,23;UBERON:0000974,7.98e-10,23;UBERON:0004807,7.98e-10,23;UBERON:0005058,7.98e-10,23;UBERON:0003351,7.98e-10,23;UBERON:0009113,7.98e-10,23;UBERON:0003295,7.98e-10,23;UBERON:0009722,7.98e-10,23;UBERON:0005562,7.98e-10,23;UBERON:0007690,7.98e-10,23;UBERON:0006562,2.12e-09,24;UBERON:0003408,2.12e-09,24;UBERON:0001557,2.12e-09,24;UBERON:0001042,2.12e-09,24;UBERON:0008814,2.12e-09,24;UBERON:0009145,2.12e-09,24;UBERON:0000077,1.78e-08,35;UBERON:0000072,2.57e-08,27;UBERON:0004177,1.02e-07,29;UBERON:0005057,1.02e-07,29;UBERON:0002394,1.33e-07,1;UBERON:0001281,1.33e-07,1;UBERON:0000353,1.33e-07,1;UBERON:0003497,1.33e-07,1;UBERON:0003909,1.33e-07,1;UBERON:0003928,1.33e-07,1;UBERON:0003835,1.33e-07,1;UBERON:0003513,1.33e-07,1;UBERON:0001280,1.33e-07,1;UBERON:0004647,1.33e-07,1;UBERON:0002294,1.33e-07,1;UBERON:0001173,1.33e-07,1;UBERON:0004912,1.33e-07,1;UBERON:0005171,1.33e-07,1 | |||
|phase1_expression=0.160148847104794,0,0,0,0.500895729946347,0.16787927191189,0,1.16210991097419,7.88416844049334,8.66038747391376,3.25314139628459,1.59544317990673,1.71200729931206,2.36035086531293,0.666219523631325,0,0,0.473193248037357,0.274228867211478,0.84877930359606,0.255129870453209,0.595745707205312,1.04479915655574,0.159992422793407,0,0,0,0,0,0,0,0,0.61506478758457,0,0.288851619751275,0,0.408338712524738,0,0,0,0,0,0,0.251793635951155,0,0,0,0,0,0,0,0,1.51004345451963,5.80289713609076,3.02484419228218,0,0,0.515672092277442,0.202316460859598,0.528990979272033,0.633831403506179,0.338844532069132,0,0,0,0.7104801149461,0.299600110518405,0.384218305321555,0,0.675029691658453,0.210324961351382,0.571301968807607,0.220868540951614,0.489963196859816,0.383381884072945,0.919218786610021,0,0,0,0.131886287730194,0.274462930807229,0,0,0,0,0.294628585473668,0.427115042397309,0,0.227178579999552,0.0755715601067855,1.73918693221007,0,0,0,0,0,0,0.170430322578058,0,0,0.422530259330042,0,0,0,0.432982082022428,0.253359865475099,0,0.22836775943812,0.517875767294343,0.148442139064825,0.173485326766136,0.304465478312141,0,0,0,0,0.247194967734374,0,0,0,0.220841518460394,0,0,0,0.209446706813455,0,0.958520996047362,1.19980546198682,0.762421362438388,0,0,0.753926112677186,0,0,0.20778804455956,0.162241263067758,0.101839363850316,0.373220911830279,0.252722758433675,0,0,0.229902104433473,0,0.150704817835715,0.272145996605311,0.384341160854549,0.374806898238915,0,0.215567992932842,0.378212160335639,0.527853372491847,0,0,0.348252166522167,0.61734640922383,0.59710280045548,0,0.257347907114715,0,0,0,0.180062061461015,0.710234206755631,0.196764231747404,0,0,0,0,0,0,0,0,0,0,0,0.617427674275707,0,0,0,0,0.257734922644187,0,0,0.190225626112559,0,0,0.251335208800269,0,0,0,0,0,0,0,0,0,0.193952487167626,0.280543279561274,0.189709611372772,0.295220295959204,0,0,0,0,0,0,0.202860121388503,0,0,0.287696137450811,0,0,0,0.372140947668503,0,0.252578877947112,0,0,0,0,0.162964976442026,0.169745085775188,0,0,0.238043640886014,0.390267295715598,0.315270288212382,0,0.159454768657487,0.163863314715738,0,0.433947175744535,0,0.54390568381871,1.96705709207614,0.275936746304732,0,0.117211686592203,0,0.252470927204373,0.315508219416257,0,0.861693590931196,0.238968797952552,0.445597348164788,0.566153061577665,0,0.584511715822624,0,0.321321316421807,0.283880170416537,0.178065603667255,0,0,0,0.242780636154981,0,0,0,0,0.516856586336442,0,0,0.316036757935816,0,0,0.340439605753788,0.18006109403131,0.258717367565509,0.428674070063185,0.886701168211368,0.178368817602071,0,0,0.23467170806371,0,0,0,0.322928853391811,0.361877549568935,0.238744688006273,0,0,0,0.170870880797853,0.412773735926445,0,0,0,0.228778173206523,0.339956859987711,0.559805809294632,0.552799895217695,0.954670618015114,0.316335993581135,0.406638934253697,0.216010681643603,0.209088296014469,0,0,0.165306911450672,0,0,0.621339313086926,0,0,0,0.194451188344048,0.129159823477731,0,0.234714477291508,0.2604087696879,0.314578033277133,0.241584120826006,0,0.316011120628178,0,0.205421914329655,0.129920822977795,0.358053391334963,0.596044064343795,0.480781798079875,0.295379054349154,0.504832249740738,0.304827226619999,0.705783295957884,0.292373642219257,0.384847366561318,0.467507608726276,0.226730383615211,0,0,0,0.19318959403219,0.187682475451182,0.549454872801795,0,0,0,0,0.572895513439397,0,0,0,0,0,0,0.51776031175182,0.103787347584177,0.798049746802062,0.170733605754134,0.486213434136588,0,0.183843508450014,0.222246727801615,0,0.320919209591815,0,0,0.377252682772152,0.187283014939765,0.320125762024346,0.34461281373368,0,0.231768651889711,0.192909220463705,0,0.294397840268795,0,0,0.238436189947321,0.145346416632329,0.282328141245992,0.338458431566706,0.365855945745545,0.263069711437843,0.135804113845862,0,0.118635018124174,0.197008964751127,0,0,0.192906610981141,0.499621155875892,0,0.429742108096597,0,0,0 | |phase1_expression=0.160148847104794,0,0,0,0.500895729946347,0.16787927191189,0,1.16210991097419,7.88416844049334,8.66038747391376,3.25314139628459,1.59544317990673,1.71200729931206,2.36035086531293,0.666219523631325,0,0,0.473193248037357,0.274228867211478,0.84877930359606,0.255129870453209,0.595745707205312,1.04479915655574,0.159992422793407,0,0,0,0,0,0,0,0,0.61506478758457,0,0.288851619751275,0,0.408338712524738,0,0,0,0,0,0,0.251793635951155,0,0,0,0,0,0,0,0,1.51004345451963,5.80289713609076,3.02484419228218,0,0,0.515672092277442,0.202316460859598,0.528990979272033,0.633831403506179,0.338844532069132,0,0,0,0.7104801149461,0.299600110518405,0.384218305321555,0,0.675029691658453,0.210324961351382,0.571301968807607,0.220868540951614,0.489963196859816,0.383381884072945,0.919218786610021,0,0,0,0.131886287730194,0.274462930807229,0,0,0,0,0.294628585473668,0.427115042397309,0,0.227178579999552,0.0755715601067855,1.73918693221007,0,0,0,0,0,0,0.170430322578058,0,0,0.422530259330042,0,0,0,0.432982082022428,0.253359865475099,0,0.22836775943812,0.517875767294343,0.148442139064825,0.173485326766136,0.304465478312141,0,0,0,0,0.247194967734374,0,0,0,0.220841518460394,0,0,0,0.209446706813455,0,0.958520996047362,1.19980546198682,0.762421362438388,0,0,0.753926112677186,0,0,0.20778804455956,0.162241263067758,0.101839363850316,0.373220911830279,0.252722758433675,0,0,0.229902104433473,0,0.150704817835715,0.272145996605311,0.384341160854549,0.374806898238915,0,0.215567992932842,0.378212160335639,0.527853372491847,0,0,0.348252166522167,0.61734640922383,0.59710280045548,0,0.257347907114715,0,0,0,0.180062061461015,0.710234206755631,0.196764231747404,0,0,0,0,0,0,0,0,0,0,0,0.617427674275707,0,0,0,0,0.257734922644187,0,0,0.190225626112559,0,0,0.251335208800269,0,0,0,0,0,0,0,0,0,0.193952487167626,0.280543279561274,0.189709611372772,0.295220295959204,0,0,0,0,0,0,0.202860121388503,0,0,0.287696137450811,0,0,0,0.372140947668503,0,0.252578877947112,0,0,0,0,0.162964976442026,0.169745085775188,0,0,0.238043640886014,0.390267295715598,0.315270288212382,0,0.159454768657487,0.163863314715738,0,0.433947175744535,0,0.54390568381871,1.96705709207614,0.275936746304732,0,0.117211686592203,0,0.252470927204373,0.315508219416257,0,0.861693590931196,0.238968797952552,0.445597348164788,0.566153061577665,0,0.584511715822624,0,0.321321316421807,0.283880170416537,0.178065603667255,0,0,0,0.242780636154981,0,0,0,0,0.516856586336442,0,0,0.316036757935816,0,0,0.340439605753788,0.18006109403131,0.258717367565509,0.428674070063185,0.886701168211368,0.178368817602071,0,0,0.23467170806371,0,0,0,0.322928853391811,0.361877549568935,0.238744688006273,0,0,0,0.170870880797853,0.412773735926445,0,0,0,0.228778173206523,0.339956859987711,0.559805809294632,0.552799895217695,0.954670618015114,0.316335993581135,0.406638934253697,0.216010681643603,0.209088296014469,0,0,0.165306911450672,0,0,0.621339313086926,0,0,0,0.194451188344048,0.129159823477731,0,0.234714477291508,0.2604087696879,0.314578033277133,0.241584120826006,0,0.316011120628178,0,0.205421914329655,0.129920822977795,0.358053391334963,0.596044064343795,0.480781798079875,0.295379054349154,0.504832249740738,0.304827226619999,0.705783295957884,0.292373642219257,0.384847366561318,0.467507608726276,0.226730383615211,0,0,0,0.19318959403219,0.187682475451182,0.549454872801795,0,0,0,0,0.572895513439397,0,0,0,0,0,0,0.51776031175182,0.103787347584177,0.798049746802062,0.170733605754134,0.486213434136588,0,0.183843508450014,0.222246727801615,0,0.320919209591815,0,0,0.377252682772152,0.187283014939765,0.320125762024346,0.34461281373368,0,0.231768651889711,0.192909220463705,0,0.294397840268795,0,0,0.238436189947321,0.145346416632329,0.282328141245992,0.338458431566706,0.365855945745545,0.263069711437843,0.135804113845862,0,0.118635018124174,0.197008964751127,0,0,0.192906610981141,0.499621155875892,0,0.429742108096597,0,0,0 | ||
|short_description=p3@Elp2 | |||
}} | }} |
Latest revision as of 02:54, 27 September 2015
Short description: | p3@Elp2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Elp2_5end |
Coexpression cluster: | MCL_coexpression_mm9:7 |
Association with transcript: | -384bp_to_ENSMUST00000025120, ENSMUST00000115825, NM_021448, uc008egw.1, uc008egx.1, uc012baj.1_5end |
EntrezGene: | Elp2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
connective tissue | 6.84e-22 | 46 |
thymus | 7.98e-10 | 23 |
neck | 7.98e-10 | 23 |
respiratory system epithelium | 7.98e-10 | 23 |
hemolymphoid system gland | 7.98e-10 | 23 |
pharyngeal epithelium | 7.98e-10 | 23 |
thymic region | 7.98e-10 | 23 |
pharyngeal gland | 7.98e-10 | 23 |
entire pharyngeal arch endoderm | 7.98e-10 | 23 |
thymus primordium | 7.98e-10 | 23 |
early pharyngeal endoderm | 7.98e-10 | 23 |
pharynx | 2.12e-09 | 24 |
gland of gut | 2.12e-09 | 24 |
upper respiratory tract | 2.12e-09 | 24 |
chordate pharynx | 2.12e-09 | 24 |
pharyngeal arch system | 2.12e-09 | 24 |
pharyngeal region of foregut | 2.12e-09 | 24 |
mixed endoderm/mesoderm-derived structure | 1.78e-08 | 35 |
segment of respiratory tract | 2.57e-08 | 27 |
hemopoietic organ | 1.02e-07 | 29 |
immune organ | 1.02e-07 | 29 |
bile duct | 1.33e-07 | 1 |
hepatic sinusoid | 1.33e-07 | 1 |
parenchyma | 1.33e-07 | 1 |
abdomen blood vessel | 1.33e-07 | 1 |
sinusoid | 1.33e-07 | 1 |
digestive system duct | 1.33e-07 | 1 |
abdominal segment blood vessel | 1.33e-07 | 1 |
trunk blood vessel | 1.33e-07 | 1 |
liver parenchyma | 1.33e-07 | 1 |
liver lobule | 1.33e-07 | 1 |
biliary system | 1.33e-07 | 1 |
biliary tree | 1.33e-07 | 1 |
biliary bud | 1.33e-07 | 1 |
hepatic duct | 1.33e-07 | 1 |