FFCP PHASE1:Mm9::chr18:75457242..75457248,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr18:75457242..75457248,+
|short_description=p@chr18:75457242..75457248,+
|description=CAGE_peak_at_chr18:75457242..75457248,+
|association_with_transcript=NA
...") |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=88 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr18:75457242..75457248,+ | |||
|description=CAGE_peak_at_chr18:75457242..75457248,+ | |||
|id=chr18:75457242..75457248,+ | |||
|ontology_enrichment_celltype=CL:0002563!1.02e-25!9;CL:0002251!1.02e-25!9;CL:0000239!2.55e-18!6;CL:0000677!2.55e-18!6;CL:0000212!2.55e-18!6;CL:0000584!2.55e-18!6;CL:0002076!6.21e-18!15;CL:0000066!1.72e-17!25;CL:0000075!1.35e-15!7;CL:0000223!6.02e-13!20;CL:0000473!7.57e-10!3;CL:0000627!7.57e-10!3;CL:0000682!7.57e-10!3;CL:0002250!5.58e-09!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,1.05e-41,9;CL:0002251,1.05e-41,9;CL:0000239,2.48e-36,6;CL:0000677,2.48e-36,6;CL:0000584,2.48e-36,6;CL:0000075,4.07e-31,7;CL:0000066,9.87e-28,25;CL:0002076,9.14e-25,15;CL:0000682,1.03e-18,3;CL:0000223,2.15e-18,20;CL:0002250,1.89e-08,3;CL:0000473,2.44e-08,7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!4.32e-41!15;UBERON:0001242!5.20e-36!13;UBERON:0000060!5.20e-36!13;UBERON:0001262!5.20e-36!13;UBERON:0004786!5.20e-36!13;UBERON:0004923!1.14e-27!24;UBERON:0003350!1.02e-25!9;UBERON:0004808!1.02e-25!9;UBERON:0001277!1.02e-25!9;UBERON:0000160!1.62e-24!43;UBERON:0000485!9.94e-21!11;UBERON:0005409!1.92e-18!59;UBERON:0004119!3.62e-09!130;UBERON:0000925!3.62e-09!130;UBERON:0006595!3.62e-09!130;UBERON:0000331!3.82e-09!3;UBERON:0002116!3.82e-09!3;UBERON:0001204!3.82e-09!3;UBERON:0001168!3.82e-09!3;UBERON:0001007!1.80e-08!128;UBERON:0001555!1.80e-08!128;UBERON:0007026!1.80e-08!128;UBERON:0004921!7.19e-07!126;UBERON:0004185!7.19e-07!126 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001242,1.47e-53,13;UBERON:0001262,1.47e-53,13;UBERON:0004786,1.47e-53,13;UBERON:0000344,2.81e-46,15;UBERON:0003350,1.05e-41,9;UBERON:0004808,1.05e-41,9;UBERON:0001277,1.05e-41,9;UBERON:0000485,5.18e-34,11;UBERON:0004923,1.68e-28,24;UBERON:0000160,6.79e-26,31;UBERON:0005409,1.29e-16,47;UBERON:0000331,1.21e-08,3;UBERON:0002116,1.21e-08,3;UBERON:0001204,1.21e-08,3;UBERON:0001168,1.21e-08,3 | |||
|phase1_expression=0,10.8182376368202,6.3699893514535,6.65421264875026,15.5277676283368,2.68606835059024,2.80335168714631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.95995453676044,0.91763712426868,5.16808767703518,4.73838195774982,3.01659725760245,0.380046838912748,2.26827116783938,2.66076612786366,0,0,0,1.1554064790051,0.332469290716985,2.04169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253359865475099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.766371165625774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32167513193519,0.264450566663544,0,0,0,0,0,0,0.474529061544512,0.164698954724011,0,0.198956472041151,0.19496408711912,0,1.08069024937347,0.597423819763102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.21183207086382,0,0,0,0,0.119372344003136,0,0,0,0,0,0,0,0,0,0.169978429993855,0,0,0,0,0,0,0,0,0,0,0,0.388844919875379,0,0,0,0,0,0,0,0,0.2604087696879,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.269141569828427,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,10.8182376368202,6.3699893514535,6.65421264875026,15.5277676283368,2.68606835059024,2.80335168714631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.95995453676044,0.91763712426868,5.16808767703518,4.73838195774982,3.01659725760245,0.380046838912748,2.26827116783938,2.66076612786366,0,0,0,1.1554064790051,0.332469290716985,2.04169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253359865475099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.766371165625774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32167513193519,0.264450566663544,0,0,0,0,0,0,0.474529061544512,0.164698954724011,0,0.198956472041151,0.19496408711912,0,1.08069024937347,0.597423819763102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.21183207086382,0,0,0,0,0.119372344003136,0,0,0,0,0,0,0,0,0,0.169978429993855,0,0,0,0,0,0,0,0,0,0,0,0.388844919875379,0,0,0,0,0,0,0,0,0.2604087696879,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.269141569828427,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr18:75457242..75457248,+ | |||
}} | }} |
Latest revision as of 03:16, 6 August 2015
Short description: | p@chr18:75457242..75457248, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr18:75457242..75457248, + |
Coexpression cluster: | MCL_coexpression_mm9:88 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 1.05e-41 | 9 |
epithelial cell of alimentary canal | 1.05e-41 | 9 |
brush border epithelial cell | 2.48e-36 | 6 |
gut absorptive cell | 2.48e-36 | 6 |
enterocyte | 2.48e-36 | 6 |
columnar/cuboidal epithelial cell | 4.07e-31 | 7 |
epithelial cell | 9.87e-28 | 25 |
endo-epithelial cell | 9.14e-25 | 15 |
M cell of gut | 1.03e-18 | 3 |
endodermal cell | 2.15e-18 | 20 |
intestinal crypt stem cell | 1.89e-08 | 3 |
defensive cell | 2.44e-08 | 7 |
Ontology term | p-value | n |
---|---|---|
intestinal mucosa | 1.47e-53 | 13 |
wall of intestine | 1.47e-53 | 13 |
gastrointestinal system mucosa | 1.47e-53 | 13 |
mucosa | 2.81e-46 | 15 |
epithelium of mucosa | 1.05e-41 | 9 |
gastrointestinal system epithelium | 1.05e-41 | 9 |
intestinal epithelium | 1.05e-41 | 9 |
simple columnar epithelium | 5.18e-34 | 11 |
organ component layer | 1.68e-28 | 24 |
intestine | 6.79e-26 | 31 |
gastrointestinal system | 1.29e-16 | 47 |
ileal mucosa | 1.21e-08 | 3 |
ileum | 1.21e-08 | 3 |
mucosa of small intestine | 1.21e-08 | 3 |
wall of small intestine | 1.21e-08 | 3 |