FFCP PHASE1:Mm9::chr2:179777433..179777444,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr2:179777433..179777444,+
|short_description=p4@Ss18l1
|description=CAGE_peak_4_at_Ss18l1_5end
|association_with_transcript=219bp_to_ENSMUST00000041126_5end
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=269397 | |EntrezGene=269397 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=22 | |||
|TSSclassifier=NA | |||
|UniProt=Q8BW22 | |UniProt=Q8BW22 | ||
|association_with_transcript=219bp_to_ENSMUST00000041126_5end | |||
|cluster_id=chr2:179777433..179777444,+ | |||
|description=CAGE_peak_4_at_Ss18l1_5end | |||
|id=chr2:179777433..179777444,+ | |||
|ontology_enrichment_celltype=CL:0000117!5.77e-15!23;CL:0000337!5.77e-15!23;CL:0000540!2.33e-13!33;CL:0000047!2.33e-13!33;CL:0000031!2.33e-13!33;CL:0000404!2.33e-13!33;CL:0002319!8.71e-11!43;CL:0000393!1.31e-10!39;CL:0000211!1.31e-10!39;CL:0000221!1.47e-10!44;CL:0000133!1.47e-10!44;CL:0000055!2.19e-08!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,4.15e-38,23;CL:0000337,4.15e-38,23;CL:0000540,1.27e-24,33;CL:0000047,1.27e-24,33;CL:0000031,1.27e-24,33;CL:0000404,1.27e-24,33;CL:0000393,7.22e-20,39;CL:0000211,7.22e-20,39;CL:0002319,4.67e-19,43;CL:0000221,1.77e-18,44;CL:0000133,1.77e-18,44;CL:0002609,1.50e-12,6;CL:0002321,2.61e-09,70;CL:0002613,2.22e-07,3;CL:0000120,4.01e-07,3;CL:0002608,5.02e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!6.88e-27!73;UBERON:0005743!6.88e-27!73;UBERON:0000073!9.63e-26!75;UBERON:0001016!9.63e-26!75;UBERON:0001049!1.10e-24!52;UBERON:0005068!1.10e-24!52;UBERON:0006241!1.10e-24!52;UBERON:0007135!1.10e-24!52;UBERON:0002346!1.44e-22!71;UBERON:0003075!1.44e-22!71;UBERON:0007284!1.44e-22!71;UBERON:0004121!2.50e-22!102;UBERON:0000924!2.50e-22!102;UBERON:0006601!2.50e-22!102;UBERON:0002020!6.13e-22!34;UBERON:0000955!7.88e-22!50;UBERON:0006238!7.88e-22!50;UBERON:0003056!1.34e-21!49;UBERON:0002616!2.50e-21!49;UBERON:0003080!5.27e-21!40;UBERON:0000033!8.04e-21!63;UBERON:0002780!2.16e-20!39;UBERON:0001890!2.16e-20!39;UBERON:0006240!2.16e-20!39;UBERON:0002791!1.80e-18!29;UBERON:0003528!1.80e-18!29;UBERON:0001893!1.80e-18!29;UBERON:0000956!3.37e-13!21;UBERON:0001869!3.37e-13!21;UBERON:0000203!3.37e-13!21;UBERON:0000153!4.56e-11!94;UBERON:0007811!6.59e-11!86;UBERON:0002619!1.74e-10!17;UBERON:0002021!2.77e-07!10;UBERON:0000411!2.77e-07!10;UBERON:0001950!2.77e-07!10;UBERON:0000025!6.75e-07!114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,3.55e-48,34;UBERON:0000073,2.89e-47,54;UBERON:0001049,4.93e-44,52;UBERON:0005068,4.93e-44,52;UBERON:0006241,4.93e-44,52;UBERON:0007135,4.93e-44,52;UBERON:0001017,3.46e-41,73;UBERON:0001016,8.19e-40,75;UBERON:0003528,3.23e-39,29;UBERON:0002791,3.23e-39,29;UBERON:0001893,3.23e-39,29;UBERON:0002616,1.43e-36,46;UBERON:0000955,1.31e-35,47;UBERON:0006238,1.31e-35,47;UBERON:0003080,1.45e-35,40;UBERON:0002780,4.43e-34,39;UBERON:0001890,4.43e-34,39;UBERON:0006240,4.43e-34,39;UBERON:0002346,5.63e-34,64;UBERON:0003075,5.63e-34,64;UBERON:0007284,5.63e-34,64;UBERON:0004121,3.03e-29,95;UBERON:0000924,3.03e-29,95;UBERON:0006601,3.03e-29,95;UBERON:0010371,1.33e-28,73;UBERON:0000956,2.38e-28,21;UBERON:0001869,2.38e-28,21;UBERON:0000203,2.38e-28,21;UBERON:0003056,1.52e-27,49;UBERON:0002619,2.20e-21,17;UBERON:0010314,1.01e-20,92;UBERON:0002021,1.69e-16,10;UBERON:0000411,1.69e-16,10;UBERON:0001950,1.69e-16,10;UBERON:0000025,6.91e-15,114;UBERON:0004111,2.72e-13,122;UBERON:0002420,1.34e-11,8;UBERON:0007245,1.34e-11,8;UBERON:0010009,1.34e-11,8;UBERON:0010011,1.34e-11,8;UBERON:0000454,1.34e-11,8;UBERON:0001948,8.91e-10,5;UBERON:0002315,8.91e-10,5;UBERON:0011216,5.60e-09,194;UBERON:0003076,1.65e-08,12;UBERON:0003057,1.65e-08,12;UBERON:0002240,4.64e-08,6;UBERON:0005174,4.64e-08,6;UBERON:0001137,4.64e-08,6;UBERON:0002950,2.50e-07,4;UBERON:0001891,2.50e-07,4;UBERON:0009616,2.50e-07,4;UBERON:0010286,2.50e-07,4;UBERON:0000369,2.82e-07,5;UBERON:0002435,2.82e-07,5;UBERON:0000204,2.82e-07,5;UBERON:0010082,2.82e-07,5;UBERON:0001954,9.02e-07,7;UBERON:0003022,9.02e-07,7;UBERON:0002421,9.02e-07,7;UBERON:0000349,9.02e-07,7;UBERON:0002600,9.02e-07,7 | |||
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| ||
|short_description=p4@Ss18l1 | |||
}} | }} |
Latest revision as of 07:18, 26 September 2015
Short description: | p4@Ss18l1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Ss18l1_5end |
Coexpression cluster: | MCL_coexpression_mm9:22 |
Association with transcript: | 219bp_to_ENSMUST00000041126_5end |
EntrezGene: | Ss18l1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 4.15e-38 | 23 |
neuroblast (sensu Vertebrata) | 4.15e-38 | 23 |
neuron | 1.27e-24 | 33 |
neuronal stem cell | 1.27e-24 | 33 |
neuroblast | 1.27e-24 | 33 |
electrically signaling cell | 1.27e-24 | 33 |
electrically responsive cell | 7.22e-20 | 39 |
electrically active cell | 7.22e-20 | 39 |
neural cell | 4.67e-19 | 43 |
ectodermal cell | 1.77e-18 | 44 |
neurectodermal cell | 1.77e-18 | 44 |
neuron of cerebral cortex | 1.50e-12 | 6 |
embryonic cell | 2.61e-09 | 70 |
striatum neuron | 2.22e-07 | 3 |
granule cell | 4.01e-07 | 3 |
hippocampal neuron | 5.02e-07 | 3 |