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FFCP PHASE1:Mm9::chrX:139953105..139953117,+: Difference between revisions

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{{FFCP
{{FFCP
|id=chrX:139953105..139953117,+
|DHSsupport=NA
|short_description=p7@Pak3
|DPIdataset=NA
|description=CAGE_peak_7_at_Pak3_5end
|association_with_transcript=-16bp_to_ENSMUST00000033640,ENSMUST00000070348,NM_001195048,uc009umg.2_5end
|EntrezGene=18481
|EntrezGene=18481
|HGNC=
|HGNC=
|MCL_coexpression_id=3743
|TSSclassifier=NA
|UniProt=Q61036,A3KGC0
|UniProt=Q61036,A3KGC0
|association_with_transcript=-16bp_to_ENSMUST00000033640,ENSMUST00000070348,NM_001195048,uc009umg.2_5end
|cluster_id=chrX:139953105..139953117,+
|description=CAGE_peak_7_at_Pak3_5end
|id=chrX:139953105..139953117,+
|ontology_enrichment_celltype=CL:0000117!1.85e-13!23;CL:0000337!1.85e-13!23;CL:0000393!1.56e-11!39;CL:0000211!1.56e-11!39;CL:0000540!1.02e-10!33;CL:0000047!1.02e-10!33;CL:0000031!1.02e-10!33;CL:0000404!1.02e-10!33;CL:0000055!9.85e-09!50;CL:0000221!1.33e-08!44;CL:0000133!1.33e-08!44;CL:0002319!2.92e-08!43
|ontology_enrichment_celltype_v019_2=CL:0000117,3.06e-21,23;CL:0000337,3.06e-21,23;CL:0000393,8.59e-14,39;CL:0000211,8.59e-14,39;CL:0000540,5.87e-13,33;CL:0000047,5.87e-13,33;CL:0000031,5.87e-13,33;CL:0000404,5.87e-13,33;CL:0002319,1.26e-08,43;CL:0000221,2.64e-08,44;CL:0000133,2.64e-08,44
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004121!5.99e-28!102;UBERON:0000924!5.99e-28!102;UBERON:0006601!5.99e-28!102;UBERON:0000033!8.20e-28!63;UBERON:0003056!4.20e-24!49;UBERON:0002346!7.18e-24!71;UBERON:0003075!7.18e-24!71;UBERON:0007284!7.18e-24!71;UBERON:0000073!1.50e-23!75;UBERON:0001016!1.50e-23!75;UBERON:0001017!4.68e-23!73;UBERON:0005743!4.68e-23!73;UBERON:0001049!8.71e-23!52;UBERON:0005068!8.71e-23!52;UBERON:0006241!8.71e-23!52;UBERON:0007135!8.71e-23!52;UBERON:0000955!2.88e-22!50;UBERON:0006238!2.88e-22!50;UBERON:0002616!1.24e-21!49;UBERON:0002020!1.20e-19!34;UBERON:0003080!3.67e-19!40;UBERON:0002780!2.21e-18!39;UBERON:0001890!2.21e-18!39;UBERON:0006240!2.21e-18!39;UBERON:0002791!1.82e-17!29;UBERON:0003528!1.82e-17!29;UBERON:0001893!1.82e-17!29;UBERON:0007811!1.02e-13!86;UBERON:0000153!9.59e-13!94;UBERON:0000956!2.04e-12!21;UBERON:0001869!2.04e-12!21;UBERON:0000203!2.04e-12!21;UBERON:0002619!2.87e-10!17;UBERON:0002021!4.74e-08!10;UBERON:0000411!4.74e-08!10;UBERON:0001950!4.74e-08!10;UBERON:0000020!9.57e-07!12;UBERON:0001032!9.57e-07!12;UBERON:0004456!9.57e-07!12
|ontology_enrichment_uberon_v019_2=UBERON:0002346,1.75e-34,64;UBERON:0003075,1.75e-34,64;UBERON:0007284,1.75e-34,64;UBERON:0004121,1.28e-32,95;UBERON:0000924,1.28e-32,95;UBERON:0006601,1.28e-32,95;UBERON:0003056,3.73e-32,49;UBERON:0000073,5.33e-32,54;UBERON:0010371,1.11e-31,73;UBERON:0002020,4.02e-31,34;UBERON:0001049,8.24e-30,52;UBERON:0005068,8.24e-30,52;UBERON:0006241,8.24e-30,52;UBERON:0007135,8.24e-30,52;UBERON:0001017,2.73e-28,73;UBERON:0003528,6.73e-28,29;UBERON:0002791,6.73e-28,29;UBERON:0001893,6.73e-28,29;UBERON:0001016,3.43e-27,75;UBERON:0000955,5.45e-26,47;UBERON:0006238,5.45e-26,47;UBERON:0003080,1.92e-25,40;UBERON:0002616,6.40e-25,46;UBERON:0002780,4.23e-24,39;UBERON:0001890,4.23e-24,39;UBERON:0006240,4.23e-24,39;UBERON:0010314,3.75e-21,92;UBERON:0000956,1.54e-18,21;UBERON:0001869,1.54e-18,21;UBERON:0000203,1.54e-18,21;UBERON:0002619,1.48e-14,17;UBERON:0002021,8.73e-14,10;UBERON:0000411,8.73e-14,10;UBERON:0001950,8.73e-14,10;UBERON:0002420,1.72e-10,8;UBERON:0007245,1.72e-10,8;UBERON:0010009,1.72e-10,8;UBERON:0010011,1.72e-10,8;UBERON:0000454,1.72e-10,8;UBERON:0000025,6.40e-10,114;UBERON:0004111,3.33e-09,122;UBERON:0000483,1.27e-07,174;UBERON:0000369,1.63e-07,5;UBERON:0002435,1.63e-07,5;UBERON:0000204,1.63e-07,5;UBERON:0010082,1.63e-07,5;UBERON:0000119,2.15e-07,176;UBERON:0000970,2.96e-07,9;UBERON:0000019,2.96e-07,9;UBERON:0000047,2.96e-07,9;UBERON:0010312,2.96e-07,9;UBERON:0004088,2.96e-07,9;UBERON:0002104,2.96e-07,9;UBERON:0001456,2.96e-07,9;UBERON:0003072,2.96e-07,9;UBERON:0004128,2.96e-07,9;UBERON:0003071,2.96e-07,9;UBERON:0001444,3.92e-07,11
|phase1_expression=0.80074423552397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.935476191661768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.76255545165808,1.31790010585369,1.46837401729345,0,0,0.219686182734472,0.194429899074283,0,0,0,0,0,0.257259436035947,0.286533439938757,0,1.01158230429799,2.64495489636016,2.53532561402472,0,0,0,0,0,0,0.384218305321555,1.14058573539325,1.35005938331691,1.89292465216244,1.42825492201902,0.220868540951614,2.9397791811589,1.53352753629178,0.919218786610021,1.10115880999389,3.31987079021488,4.30098293117482,2.50583946687368,1.82975287204819,2.6045668527838,2.23346399201105,1.12552522006336,2.44477196442896,1.17851434189467,3.27454865837937,2.05039390407831,0.681535739998656,0.453429360640713,0,0,0,0,0,0,0,0,0.259786004602869,0.35333957451034,0.985903938436763,0,0,0,0,0.253359865475099,0,0,0,0.29688427812965,0.173485326766136,0,0,0,0.352766121407114,0.125666591329675,0.247194967734374,0.433798070759735,0,0.161766849947409,0,0,0,0.878342391034642,0.83778682725382,0,0,0,0,3.59497534571574,2.74500361691176,2.63874139437015,2.60736480288415,1.27857728665165,2.90903262383384,1.46017136760982,0,0,0.252722758433675,0.210441855886474,0.650602214813519,2.06911893990126,2.16074555766419,1.65775299619287,2.65342346690179,4.99643509110914,2.99845518591132,1.55222022443409,0,0.378212160335639,0.527853372491847,0,0.556094498451196,0,0.411564272815887,0,0,0,0,0.207125772535502,0,0.180062061461015,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,2.3131894342054,2.88132914661996,0,0,0.213288250535234,0.232236671860439,0.515469845288373,0.201683524623343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.315270288212382,0,0.159454768657487,0,0,0,0,0,0,0,4.0137647496948,4.10240903072711,0.983609672260053,0.252470927204373,0,0,0.646270193198397,0,0.445597348164788,0.566153061577665,0,0.292255857911312,0.395287777946524,1.92792789853084,0.567760340833074,0,0,0.494910368917606,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,1.70219802876894,0.900305470156551,0.388076051348264,0.428674070063185,0.532020700926821,0.178368817602071,0.329098041204242,0,0,0,0,1.48397627647332,0.645857706783622,0.542816324353403,0.596861720015682,1.14898629821543,0.291480836629851,4.63563255026274,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0.209088296014469,0.218362563746178,0.134864346384821,0,0.26175594198403,0.129614973291793,0,0.56369293868419,0.598066184175915,0.165458490457098,0.583353565032143,0.129159823477731,1.01373675294467,0.469428954583016,0.781226309063701,1.57289016638566,0.724752362478018,0.864090018773596,0,0.202725215290164,0,0,0,0,0,0,0,0,0,0,0,0,1.13365191807606,0,0,0,0,0.375364950902364,0.183151624267265,0.214368379079066,0.501572104035363,3.3885110557024,4.60325236507177,2.29158205375759,3.60891682921744,4.11049511862385,2.2661816921691,4.05013500139084,2.2516060161211,1.81256963593682,1.03552062350364,0.830298780673413,1.19707462020309,1.19513524027894,0.972426868273176,0.628839487883947,0.919217542250071,1.11123363900808,0.412070114477788,0.962757628775446,1.01078884705519,2.28131369901216,0.943131706930381,1.31098110457835,0.640251524048693,1.09127391015665,0.476293691283074,0.579421629724277,0.38581844092741,1.23625770240992,1.03039244094078,0.685738504770831,0.177475806159338,0.953744759789284,0.436039249896986,0.658765662907314,0.930760686808441,0.548783918618318,0.789209134313529,0.679020569229309,0.561142271657738,0.949080144993393,0.492522411877817,0.409231043169689,0.929621047115796,0.964533054905707,0.499621155875892,0.701794825336225,0.644613162144895,0.382576664137687,0,0
|phase1_expression=0.80074423552397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.935476191661768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.76255545165808,1.31790010585369,1.46837401729345,0,0,0.219686182734472,0.194429899074283,0,0,0,0,0,0.257259436035947,0.286533439938757,0,1.01158230429799,2.64495489636016,2.53532561402472,0,0,0,0,0,0,0.384218305321555,1.14058573539325,1.35005938331691,1.89292465216244,1.42825492201902,0.220868540951614,2.9397791811589,1.53352753629178,0.919218786610021,1.10115880999389,3.31987079021488,4.30098293117482,2.50583946687368,1.82975287204819,2.6045668527838,2.23346399201105,1.12552522006336,2.44477196442896,1.17851434189467,3.27454865837937,2.05039390407831,0.681535739998656,0.453429360640713,0,0,0,0,0,0,0,0,0.259786004602869,0.35333957451034,0.985903938436763,0,0,0,0,0.253359865475099,0,0,0,0.29688427812965,0.173485326766136,0,0,0,0.352766121407114,0.125666591329675,0.247194967734374,0.433798070759735,0,0.161766849947409,0,0,0,0.878342391034642,0.83778682725382,0,0,0,0,3.59497534571574,2.74500361691176,2.63874139437015,2.60736480288415,1.27857728665165,2.90903262383384,1.46017136760982,0,0,0.252722758433675,0.210441855886474,0.650602214813519,2.06911893990126,2.16074555766419,1.65775299619287,2.65342346690179,4.99643509110914,2.99845518591132,1.55222022443409,0,0.378212160335639,0.527853372491847,0,0.556094498451196,0,0.411564272815887,0,0,0,0,0.207125772535502,0,0.180062061461015,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,2.3131894342054,2.88132914661996,0,0,0.213288250535234,0.232236671860439,0.515469845288373,0.201683524623343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.315270288212382,0,0.159454768657487,0,0,0,0,0,0,0,4.0137647496948,4.10240903072711,0.983609672260053,0.252470927204373,0,0,0.646270193198397,0,0.445597348164788,0.566153061577665,0,0.292255857911312,0.395287777946524,1.92792789853084,0.567760340833074,0,0,0.494910368917606,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,1.70219802876894,0.900305470156551,0.388076051348264,0.428674070063185,0.532020700926821,0.178368817602071,0.329098041204242,0,0,0,0,1.48397627647332,0.645857706783622,0.542816324353403,0.596861720015682,1.14898629821543,0.291480836629851,4.63563255026274,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0.209088296014469,0.218362563746178,0.134864346384821,0,0.26175594198403,0.129614973291793,0,0.56369293868419,0.598066184175915,0.165458490457098,0.583353565032143,0.129159823477731,1.01373675294467,0.469428954583016,0.781226309063701,1.57289016638566,0.724752362478018,0.864090018773596,0,0.202725215290164,0,0,0,0,0,0,0,0,0,0,0,0,1.13365191807606,0,0,0,0,0.375364950902364,0.183151624267265,0.214368379079066,0.501572104035363,3.3885110557024,4.60325236507177,2.29158205375759,3.60891682921744,4.11049511862385,2.2661816921691,4.05013500139084,2.2516060161211,1.81256963593682,1.03552062350364,0.830298780673413,1.19707462020309,1.19513524027894,0.972426868273176,0.628839487883947,0.919217542250071,1.11123363900808,0.412070114477788,0.962757628775446,1.01078884705519,2.28131369901216,0.943131706930381,1.31098110457835,0.640251524048693,1.09127391015665,0.476293691283074,0.579421629724277,0.38581844092741,1.23625770240992,1.03039244094078,0.685738504770831,0.177475806159338,0.953744759789284,0.436039249896986,0.658765662907314,0.930760686808441,0.548783918618318,0.789209134313529,0.679020569229309,0.561142271657738,0.949080144993393,0.492522411877817,0.409231043169689,0.929621047115796,0.964533054905707,0.499621155875892,0.701794825336225,0.644613162144895,0.382576664137687,0,0
|short_description=p7@Pak3
}}
}}

Latest revision as of 16:02, 1 October 2015

Short description:p7@Pak3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_7_at_Pak3_5end
Coexpression cluster:MCL_coexpression_mm9:3743
Association with transcript: -16bp_to_ENSMUST00000033640, ENSMUST00000070348, NM_001195048, uc009umg.2_5end
EntrezGene:Pak3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p7@Pak3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.80
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.94
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.76
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D91.32
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B31.47
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C31.01
Mouse Granule cells, donor2.CNhs12357.11731-123E32.64
Mouse Granule cells, donor3.CNhs12108.11636-122C72.54
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.14
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.35
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.89
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.43
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.22
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D22.94
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.53
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F33.32
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D74.30
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D42.51
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.83
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D82.60
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E42.23
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.13
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I62.44
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.18
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F63.27
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E12.05
Mouse Schwann, donor1.CNhs12507.11728-123D90.68
Mouse Schwann, donor2.CNhs12573.11746-123F90.45
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.35
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.99
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.00
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.30
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.35
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H10.43
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.88
cerebellum, neonate N30.CNhs11135.1395-42I20.84
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A43.59
corpus striatum, adult.CNhs10487.19-21D82.75
corpus striatum, neonate N00.CNhs11226.630-43F12.64
cortex, adult.CNhs10473.12-14D52.61
cortex, neonate N30.CNhs11107.1392-42F21.28
diencephalon, adult.CNhs10482.20-12F22.91
diencephalon, neonate N30.CNhs11201.1388-42B21.46
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C60.65
eyeball, embryo E14.CNhs10521.399-16E22.07
eyeball, embryo E15.CNhs10593.426-16C92.16
eyeball, embryo E17.CNhs11023.1261-18D41.66
eyeball, neonate N00.CNhs11207.633-15C62.65
eyeball, neonate N01.CNhs11140.1532-43E75.00
eyeball, neonate N02.CNhs11205.1551-44G83.00
eyeball, neonate N16.CNhs11188.777-19A21.55
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.38
forelimb, embryo E13.CNhs10589.384-1E20.53
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.56
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.41
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E82.31
hippocampus, neonate N00.CNhs11228.627-43G12.88
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.52
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.00
kidney, neonate N10.CNhs11206.758-6D50.06
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.32
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C24.01
medulla oblongata, neonate N30.CNhs11200.1396-42A34.10
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.98
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.65
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.45
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.57
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I91.93
ovary, adult.CNhs10507.91-2I70.57
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.49
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G81.70
pituitary gland, embryo E12.CNhs11018.346-16E60.90
pituitary gland, embryo E13.CNhs11009.370-44C70.39
pituitary gland, embryo E14.CNhs11037.398-44A50.43
pituitary gland, embryo E15.CNhs10592.427-16B90.53
pituitary gland, embryo E16.CNhs11036.449-43F60.18
pituitary gland, embryo E17.CNhs11039.1265-44F50.33
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C31.48
skin, neonate N00.CNhs11124.650-25G40.65
skin, neonate N03.CNhs11215.662-22H30.54
skin, neonate N06.CNhs11097.693-20I50.60
skin, neonate N10.CNhs11108.762-6C41.15
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C94.64
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.11
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A90.00
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F50.60
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.58
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G51.01
testis, neonate N00.CNhs11189.1300-22B70.47
testis, neonate N07.CNhs11222.726-26I40.78
testis, neonate N10.CNhs11204.763-44D91.57
testis, neonate N20.CNhs11110.839-18H30.72
testis, neonate N30.CNhs11130.1391-42E20.86
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B41.13
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.38
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A13.39
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A24.60
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A32.29
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D73.61
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A44.11
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A52.27
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A64.05
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A72.25
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A81.81
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.04
whole body, embryo E11.CNhs11014.324-5I80.83
whole body, embryo E12.CNhs10587.857-27C91.20
whole body, embryo E13.CNhs10512.372-23H21.20
whole body, embryo E14.5.CNhs10578.420-27D20.97
whole body, embryo E14.CNhs10519.395-14B10.63
whole body, embryo E16.CNhs10514.453-14F20.92
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G52.28
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.94
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.31
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.09
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.66
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.93
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.55
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.68
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.49
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.93
whole body, embryo E17.5.CNhs10513.490-9F90.96
whole body, embryo E17.CNhs10517.475-3I50.50
whole body, embryo E18.CNhs10516.493-3B30.70
whole body, neonate N00.CNhs10525.657-19C20.64
whole body, neonate N01.CNhs10576.659-23C60.38
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)3.06e-2123
neuroblast (sensu Vertebrata)3.06e-2123
electrically responsive cell8.59e-1439
electrically active cell8.59e-1439
neuron5.87e-1333
neuronal stem cell5.87e-1333
neuroblast5.87e-1333
electrically signaling cell5.87e-1333
neural cell1.26e-0843
ectodermal cell2.64e-0844
neurectodermal cell2.64e-0844

Uber anatomy
Ontology termp-valuen
neurectoderm1.75e-3464
neural plate1.75e-3464
presumptive neural plate1.75e-3464
ectoderm-derived structure1.28e-3295
ectoderm1.28e-3295
presumptive ectoderm1.28e-3295
pre-chordal neural plate3.73e-3249
regional part of nervous system5.33e-3254
ecto-epithelium1.11e-3173
gray matter4.02e-3134
neural tube8.24e-3052
neural rod8.24e-3052
future spinal cord8.24e-3052
neural keel8.24e-3052
central nervous system2.73e-2873
brain grey matter6.73e-2829
regional part of telencephalon6.73e-2829
telencephalon6.73e-2829
nervous system3.43e-2775
brain5.45e-2647
future brain5.45e-2647
anterior neural tube1.92e-2540
regional part of brain6.40e-2546
regional part of forebrain4.23e-2439
forebrain4.23e-2439
future forebrain4.23e-2439
structure with developmental contribution from neural crest3.75e-2192
cerebral cortex1.54e-1821
cerebral hemisphere1.54e-1821
pallium1.54e-1821
regional part of cerebral cortex1.48e-1417
occipital lobe8.73e-1410
visual cortex8.73e-1410
neocortex8.73e-1410
basal ganglion1.72e-108
nuclear complex of neuraxis1.72e-108
aggregate regional part of brain1.72e-108
collection of basal ganglia1.72e-108
cerebral subcortex1.72e-108
tube6.40e-10114
anatomical conduit3.33e-09122
epithelium1.27e-07174
corpus striatum1.63e-075
striatum1.63e-075
ventral part of telencephalon1.63e-075
future corpus striatum1.63e-075
cell layer2.15e-07176
eye2.96e-079
camera-type eye2.96e-079
simple eye2.96e-079
immature eye2.96e-079
ocular region2.96e-079
visual system2.96e-079
face2.96e-079
optic cup2.96e-079
optic vesicle2.96e-079
eye primordium2.96e-079
subdivision of head3.92e-0711
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