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{{f5samples
{{f5samples
|id=FF:11754-123G8
|DRA_sample_Accession=CAGE@SAMD00005645
|name=mesenchymal precursor cell - cardiac, donor3
|accession_numbers=CAGE;DRX008553;DRR009425;DRZ000850;DRZ002235;DRZ012200;DRZ013585
|sample_id=11754
|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0007100,UBERON:0000948,UBERON:0002384,UBERON:0000479,UBERON:0010314,UBERON:0000062,UBERON:0004120,UBERON:0000061,UBERON:0000465,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0003103,UBERON:0010317,UBERON:0004535,UBERON:0001009
|rna_tube_id=123G8
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000723,CL:0000048,CL:0000548,CL:0002320,CL:0002371,CL:0000219,CL:0000134,CL:0000255,CL:0002494,CL:0000034,CL:0000569
|rna_box=123
|rna_position=G8
|sample_cell_lot=HH-394-AD
|sample_cell_catalog=
|sample_company=
|rna_lot_number=
|rna_catalog_number=
|sample_species=Human (Homo sapiens)
|sample_strain=
|sample_dev_stage=
|sample_tissue=heart
|sample_donor(cell lot)=
|sample_sex=
|sample_age=
|sample_ethnicity=
|rna_rin=
|rna_od260/230=2.12
|rna_od260/280=2.05
|sample_cell_type=mesenchymal precursor cell
|sample_cell_line=
|sample_collaboration=Claudio Schneider LNCIB
|sample_experimental_condition=
|sample_disease=
|rna_sample_type=
|rna_extraction_protocol=
|rna_weight_ug=43.19475
|rna_concentration=0.57593
|sample_note=
|profile_hcage=CNhs12370,LSID914,release011,COMPLETED
|profile_cagescan=,,,
|profile_srnaseq=,,,
|profile_rnaseq=,,,
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000004,CL:0000011,CL:0000012,CL:0000034,CL:0000048,CL:0000063,CL:0000133,CL:0000134,CL:0000144,CL:0000219,CL:0000220,CL:0000221,CL:0000255,CL:0000333,CL:0000548,CL:0000569,CL:0000723,CL:0002320,CL:0002321,CL:0002371,CL:0002494
|ancestors_in_anatomy_facet=UBERON:0000025,UBERON:0000061,UBERON:0000062,UBERON:0000119,UBERON:0000465,UBERON:0000467,UBERON:0000468,UBERON:0000479,UBERON:0000480,UBERON:0000481,UBERON:0000483,UBERON:0000922,UBERON:0000923,UBERON:0000926,UBERON:0000948,UBERON:0001009,UBERON:0001048,UBERON:0001062,UBERON:0002050,UBERON:0002384,UBERON:0002532,UBERON:0003081,UBERON:0003084,UBERON:0003914,UBERON:0004120,UBERON:0004140,UBERON:0004141,UBERON:0004291,UBERON:0004535,UBERON:0004872,UBERON:0005291,UBERON:0005423,UBERON:0005498,UBERON:0007005,UBERON:0007100
|ancestors_in_disease_facet=
|ancestors_in_disease_facet=
|sample_description=
|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000002,FF:0000101,FF:0000001,FF:0000271
|comment=
|created_by=
|creation_date=
|data_phase=2
|datafreeze_phase=2
|def=
|expression_enrichment_score=chr1:170632285..170632309,+!p1@PRRX1!1.68!53.16!PRRX1;;chr8:11561684..11561751,+!p1@GATA4!1.53!32.80!GATA4;;chr12:52445218..52445237,+!p1@NR4A1!1.48!356.42!NR4A1;;chr6:134210243..134210257,+!p1@TCF21!1.46!28.13!TCF21;;chr19:45971246..45971265,+!p1@FOSB!1.42!449.06!FOSB;;chr2:19558373..19558392,-!p1@OSR1!1.24!43.99!OSR1;;chr21:36260773..36260804,-!p7@RUNX1!1.24!22.23!RUNX1;;chr1:170633348..170633399,+!p2@PRRX1!1.18!19.43!PRRX1;;chr9:132427972..132428056,+!p1@PRRX2!1.17!17.88!PRRX2;;chr11:46299199..46299233,+!p1@CREB3L1!1.15!66.99!CREB3L1;;chr3:141105705..141105770,+!p4@ZBTB38!1.15!15.85!ZBTB38;;chr1:170633262..170633285,+!p3@PRRX1!1.15!14.92!PRRX1;;chr18:19749541..19749557,+!p1@GATA6!1.14!39.79!GATA6;;chr2:239756671..239756732,+!p1@TWIST2!1.13!40.10!TWIST2;;chr9:132427883..132427951,+!p2@PRRX2!1.12!12.12!PRRX2;;chr8:55370487..55370503,+!p1@SOX17!1.09!11.35!SOX17;;chr2:157189180..157189290,-!p1@NR4A2!1.06!55.65!NR4A2;;chr2:239756739..239756755,+!p2@TWIST2!1.06!17.88!TWIST2;;chr17:1959369..1959388,+!p2@HIC1!1.05!27.05!HIC1;;chr20:50179368..50179392,-!p2@NFATC2!1.05!13.21!NFATC2;;chrY:21906594..21906622,-!p1@KDM5D!1.05!10.10!KDM5D;;chr8:22550982..22550999,-!p1@EGR3!1.03!28.13!EGR3;;chr2:102091566..102091581,-!p1@RFX8!1.03!9.64!RFX8;;chr10:131762504..131762555,-!p1@EBF3!1.02!9.48!EBF3;;chr3:5021268..5021282,+!p4@BHLHE40!1.01!19.12!BHLHE40;;chr1:170632477..170632506,+!p6@PRRX1!1.01!9.17!PRRX1;;chr5:137804484..137804498,+!p2@EGR1!0.99!35.91!EGR1;;chr19:13134772..13134822,+!p2@NFIX!0.97!12.28!NFIX;;chr3:193854202..193854232,+!p2@HES1!0.97!8.39!HES1;;chr4:174450089..174450153,-!p2@HAND2!0.97!8.39!HAND2;;chr7:35293685..35293718,-!p1@TBX20!0.97!8.24!TBX20;;chr1:170632137..170632172,+!p10@PRRX1!0.96!8.08!PRRX1;;chr3:25470156..25470227,+!p2@RARB!0.95!7.93!RARB;;chr8:49833948..49833973,-!p2@SNAI2!0.94!50.52!SNAI2;;chr17:38256799..38256815,-!p3@NR1D1!0.94!14.14!NR1D1;;chr6:85474299..85474324,-!p1@TBX18!0.94!13.99!TBX18;;chr4:174451370..174451387,-!p1@HAND2!0.94!7.62!HAND2;;chr7:44143925..44143970,+!p1@AEBP1!0.93!173.31!AEBP1;;chr7:14029283..14029311,-!p1@ETV1!0.93!41.19!ETV1;;chr3:157823517..157823562,-!p1@SHOX2!0.93!8.08!SHOX2;;chr1:170632723..170632739,+!p8@PRRX1!0.92!7.31!PRRX1;;chr3:193853927..193853944,+!p1@HES1!0.90!237.97!HES1;;chr14:29234581..29234601,+!p2@FOXG1!0.90!6.99!FOXG1;;chr19:54058073..54058088,+!p1@ZNF331!0.89!6.84!ZNF331;;chr17:1958388..1958404,+!p1@HIC1!0.88!43.99!HIC1;;chr12:26277817..26277863,-!p2@BHLHE41!0.88!9.17!BHLHE41;;chr8:49833978..49833996,-!p1@SNAI2!0.87!139.89!SNAI2;;chr2:121493425..121493474,+!p1@GLI2!0.87!14.61!GLI2;;chr1:170632250..170632277,+!p7@PRRX1!0.87!6.37!PRRX1;;chr14:24837368..24837401,+!p1@NFATC4!0.86!15.23!NFATC4;;chr20:48599506..48599526,+!p1@SNAI1!0.85!41.81!SNAI1;;chr8:72756267..72756296,-!p4@MSC!0.84!9.02!MSC;;chr20:6748325..6748352,+!p1@BMP2!0.84!8.70!BMP2;;chr18:53068911..53068935,-!p4@TCF4!0.84!6.68!TCF4;;chr16:31076332..31076388,-!p3@ZNF668!0.84!5.91!ZNF668;;chr2:102091144..102091183,-!p2@RFX8!0.83!5.75!RFX8;;chr16:86600426..86600441,+!p1@FOXC2!0.82!14.61!FOXC2;;chr2:121493492..121493537,+!p2@GLI2!0.81!9.48!GLI2;;chr8:25902876..25902936,-!p1@EBF2!0.81!5.44!EBF2;;chr1:23885981..23886002,-!p1@ID3!0.80!1017.34!ID3;;chr7:19157248..19157268,-!p1@TWIST1!0.80!15.70!TWIST1;;chr7:44143978..44143989,+!p2@AEBP1!0.80!10.10!AEBP1;;chr7:44143997..44144008,+!p3@AEBP1!0.80!6.84!AEBP1;;chr1:170632115..170632136,+!p9@PRRX1!0.80!5.28!PRRX1;;chr14:29235961..29236008,+!p1@FOXG1!0.80!5.28!FOXG1;;chrY:2803415..2803468,+!p1@ZFY!0.79!5.13!ZFY;;chr20:30193083..30193098,+!p1@ID1!0.78!450.46!ID1;;chr12:66218183..66218209,+!p4@HMGA2!0.78!10.26!HMGA2;;chr1:170632959..170632987,+!p4@PRRX1!0.78!5.60!PRRX1;;chr16:86600870..86600921,+!p2@FOXC2!0.78!4.97!FOXC2;;chr12:54447637..54447659,+!p4@HOXC4!0.78!4.97!HOXC4;;chr14:62162258..62162269,+!p2@HIF1A!0.77!51.14!HIF1A;;chr17:38256822..38256851,-!p1@NR1D1!0.77!41.66!NR1D1;;chr12:66218255..66218304,+!p3@HMGA2!0.77!13.99!HMGA2;;chr8:106330656..106330684,+!p1@ZFPM2!0.77!13.83!ZFPM2;;chr17:46622070..46622109,-!p1@HOXB2!0.77!11.66!HOXB2;;chr1:221052776..221052799,+!p1@HLX!0.77!9.33!HLX;;chr11:46299539..46299620,+!p2@CREB3L1!0.77!8.70!CREB3L1;;chr5:142780237..142780261,-!p7@NR3C1!0.76!4.82!NR3C1;;chr12:66218598..66218645,+!p2@HMGA2!0.75!23.16!HMGA2;;chr18:19749517..19749531,+!p3@GATA6!0.75!8.70!GATA6;;chr17:46622114..46622138,-!p4@HOXB2!0.75!7.31!HOXB2;;chr2:8822176..8822196,+!p1@ID2!0.74!711.90!ID2;;chr3:141087454..141087465,+!p19@ZBTB38!0.74!4.51!ZBTB38;;chr15:67430351..67430366,+!p10@SMAD3!0.74!4.51!SMAD3;;chr1:44513995..44514031,+!p1@KLF17!0.74!4.51!KLF17;;chr14:62162285..62162296,+!p3@HIF1A!0.73!25.03!HIF1A;;chr1:170632051..170632081,+!p16@PRRX1!0.73!4.35!PRRX1;;chr1:170632439..170632465,+!p11@PRRX1!0.73!4.35!PRRX1;;chr7:27183291..27183324,-!p1@HOXA5!0.73!4.35!HOXA5;;chr15:57511609..57511651,+!p2@TCF12!0.72!7.62!TCF12;;chr1:170632647..170632659,+!p17@PRRX1!0.72!4.20!PRRX1;;chr3:141087393..141087426,+!p3@ZBTB38!0.71!18.34!ZBTB38;;chr11:120107344..120107351,+!p1@POU2F3!0.71!5.13!POU2F3;;chr1:151032860..151032918,+!p1@MLLT11!0.70!54.25!MLLT11;;chr5:72744594..72744609,-!p1@FOXD1!0.70!20.67!FOXD1;;chr12:26277956..26277980,-!p1@BHLHE41!0.70!16.17!BHLHE41;;chr5:158526917..158526932,-!p1@EBF1!0.70!10.88!EBF1;;chr7:27153454..27153469,-!p2@HOXA3!0.70!4.04!HOXA3;;chr5:137801160..137801176,+!p1@EGR1!0.69!442.37!EGR1;;chr7:19157043..19157088,-!p2@TWIST1!0.69!10.88!TWIST1;;chr9:102584262..102584276,+!p1@NR4A3!0.69!9.48!NR4A3;;chr15:42749722..42749739,-!p2@ZFP106!0.69!7.46!ZFP106;;chr8:106330696..106330719,+!p2@ZFPM2!0.69!5.13!ZFPM2;;chr1:170632310..170632321,+!p15@PRRX1!0.69!3.89!PRRX1;;chr3:21792585..21792625,-!p2@ZNF385D!0.68!4.35!ZNF385D;;chr14:75745523..75745537,+!p1@FOS!0.67!508.12!FOS;;chr21:36260343..36260402,-!p6@RUNX1!0.67!6.37!RUNX1;;chr10:35484053..35484076,+!p1@CREM!0.66!9.95!CREM;;chr9:102584159..102584174,+!p2@NR4A3!0.66!6.99!NR4A3;;chr21:36260295..36260310,-!p3@RUNX1!0.66!6.22!RUNX1;;chr18:19749386..19749404,+!p2@GATA6!0.66!5.44!GATA6;;chr1:170633245..170633256,+!p14@PRRX1!0.66!3.58!PRRX1;;chr7:27183263..27183284,-!p2@HOXA5!0.66!3.58!HOXA5;;chr11:125034640..125034655,+!p1@PKNOX2!0.66!3.58!PKNOX2;;chr9:16705069..16705086,-!p3@BNC2!0.66!3.58!BNC2;;chr6:144329384..144329405,-!p1@PLAGL1!0.65!47.10!PLAGL1;;chr8:72756667..72756736,-!p2@MSC!0.65!5.75!MSC;;chr1:170632683..170632696,+!p12@PRRX1!0.65!3.42!PRRX1;;chr4:111544219..111544240,-!p1@PITX2!0.65!3.42!PITX2;;chr3:5021191..5021202,+!p3@BHLHE40!0.64!10.26!BHLHE40;;chr18:53257001..53257015,-!p5@TCF4!0.64!6.22!TCF4;;chr2:66662895..66662907,+!p3@MEIS1!0.64!4.35!MEIS1;;chr13:45010939..45011033,-!p1@TSC22D1!0.63!256.78!TSC22D1;;chr12:54447599..54447630,+!p3@HOXC4!0.63!4.20!HOXC4;;chr16:86600458..86600461,+!p3@FOXC2!0.63!3.26!FOXC2;;chr1:170632762..170632786,+!p13@PRRX1!0.63!3.26!PRRX1;;chr3:71630980..71631110,-!p3@FOXP1!0.62!12.75!FOXP1;;chr1:158979872..158979898,+!p3@IFI16!0.62!11.35!IFI16;;chr7:14029312..14029325,-!p4@ETV1!0.62!4.04!ETV1;;chr6:19837592..19837621,+!p1@ID4!0.61!22.38!ID4;;chr17:59477233..59477263,+!p1@TBX2!0.61!11.04!TBX2;;chr10:114710244..114710257,+!p3@TCF7L2!0.61!9.48!TCF7L2;;chr15:96874927..96874938,+!p8@NR2F2!0.61!7.31!NR2F2;;chr8:72756063..72756125,-!p1@MSC!0.61!6.99!MSC;;chr14:29236269..29236285,+!p3@FOXG1!0.61!3.11!FOXG1;;chr9:2158443..2158481,+!p2@SMARCA2!0.60!9.79!SMARCA2;;chr7:137686763..137686784,-!p5@CREB3L2!0.60!5.75!CREB3L2;;chr7:27183114..27183138,-!p3@HOXA5!0.60!2.95!HOXA5;;chr17:46132044..46132080,+!p4@NFE2L1!0.60!2.95!NFE2L1;;chr8:103667935..103667960,-!p1@KLF10!0.59!159.01!KLF10;;chr6:21597765..21597779,+!p2@SOX4!0.59!28.29!SOX4;;chr4:4861385..4861398,+!p1@MSX1!0.59!9.95!MSX1;;chr19:13106214..13106382,+!p1@NFIX!0.58!79.89!NFIX;;chr12:115121962..115121987,-!p1@TBX3!0.58!29.07!TBX3;;chr9:16870710..16870763,-!p1@BNC2!0.58!5.44!BNC2;;chr12:66218212..66218244,+!p5@HMGA2!0.58!4.35!HMGA2;;chr19:54041669..54041697,+!p2@ZNF331!0.58!2.80!ZNF331;;chr9:110252035..110252057,-!p1@KLF4!0.57!53.47!KLF4;;chr12:124873357..124873401,-!p1@NCOR2!0.57!38.70!NCOR2;;chr17:46621937..46621966,-!p2@HOXB2!0.57!8.55!HOXB2;;chr1:151032833..151032850,+!p3@MLLT11!0.57!6.99!MLLT11;;chr14:75746722..75746777,+!p2@FOS!0.57!3.73!FOS;;chr5:137804130..137804156,+!p5@EGR1!0.57!2.95!EGR1;;chr3:5021113..5021180,+!p1@BHLHE40!0.56!231.14!BHLHE40;;chr11:65686732..65686756,+!p2@DRAP1!0.56!13.52!DRAP1;;chr12:26277929..26277955,-!p3@BHLHE41!0.56!4.04!BHLHE41;;chr8:72756213..72756243,-!p5@MSC!0.56!3.58!MSC;;chr1:221052840..221052875,+!p4@HLX!0.56!3.26!HLX;;chr1:170633194..170633205,+!p18@PRRX1!0.56!2.64!PRRX1;;chr2:113994491..113994515,-!p7@PAX8!0.56!2.64!PAX8;;chr15:67458491..67458505,+!p18@SMAD3!0.56!2.64!SMAD3;;chr11:125034605..125034636,+!p2@PKNOX2!0.56!2.64!PKNOX2;;chr1:158979792..158979814,+!p2@IFI16!0.55!30.47!IFI16;;chr2:85980951..85981004,+!p1@ATOH8!0.55!4.66!ATOH8;;chr3:25469724..25469773,+!p1@RARB!0.55!4.04!RARB;;chr9:16870659..16870675,-!p2@BNC2!0.55!3.26!BNC2;;chr22:38598086..38598105,+!p1@MAFF!0.54!33.11!MAFF;;chr3:39195037..39195069,-!p2@CSRNP1!0.54!19.27!CSRNP1;;chr6:45296048..45296082,+!p1@RUNX2!0.54!2.95!RUNX2;;chr8:72756637..72756664,-!p3@MSC!0.54!2.95!MSC;;chr7:27170359..27170381,-!p1@HOXA4!0.54!2.49!HOXA4;;chr1:119530493..119530572,-!p1@TBX15!0.54!2.49!TBX15;;chr2:102091478..102091490,-!p3@RFX8!0.54!2.49!RFX8;;chr3:25469815..25469866,+!p3@RARB!0.54!2.49!RARB;;chr18:19749504..19749515,+!p5@GATA6!0.54!2.49!GATA6;;chr3:101568349..101568365,+!p1@NFKBIZ!0.53!159.32!NFKBIZ;;chr1:37940170..37940190,+!p1@ZC3H12A!0.53!37.77!ZC3H12A;;chr18:77155922..77155939,+!p1@NFATC1!0.53!7.93!NFATC1;;chr3:114343768..114343822,-!p1@ZBTB20!0.52!12.75!ZBTB20;;chr17:46622205..46622218,-!p3@HOXB2!0.52!2.80!HOXB2;;chr5:142780189..142780223,-!p6@NR3C1!0.52!2.33!NR3C1;;chr7:1577899..1577943,+!p3@MAFK!0.52!2.33!MAFK;;chr7:27142290..27142310,-!p1@HOXA2!0.52!2.33!HOXA2;;chr12:66218923..66218934,+!p14@HMGA2!0.52!2.33!HMGA2;;chr3:21792682..21792720,-!p1@ZNF385D!0.52!2.33!ZNF385D;;chr3:21792790..21792824,-!p4@ZNF385D!0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|fantom_cat=http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000034;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000133;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000134;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000221;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000222;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000569;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0002494;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0000948
|ffid_belonging_in_development=CL:0000133,CL:0000134,CL:0000011,CL:0000221
|fonse_cell_line=
|fonse_cell_line=
|fonse_cell_line_closure=
|fonse_cell_line_closure=
Line 66: Line 41:
|fonse_treatment=
|fonse_treatment=
|fonse_treatment_closure=
|fonse_treatment_closure=
|top_motifs=
|has_quality=
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/mesenchymal%2520precursor%2520cell%2520-%2520cardiac%252c%2520donor3.CNhs12370.11754-123G8.hg19.nobarcode.bam
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/mesenchymal%2520precursor%2520cell%2520-%2520cardiac%252c%2520donor3.CNhs12370.11754-123G8.hg19.ctss.bed.gz
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/mesenchymal%2520precursor%2520cell%2520-%2520cardiac%252c%2520donor3.CNhs12370.11754-123G8.hg19.nobarcode.rdna.fa.gz
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/mesenchymal%2520precursor%2520cell%2520-%2520cardiac%252c%2520donor3.CNhs12370.11754-123G8.hg38.nobarcode.bam
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/mesenchymal%2520precursor%2520cell%2520-%2520cardiac%252c%2520donor3.CNhs12370.11754-123G8.hg38.nobarcode.ctss.bed.gz
|id=FF:11754-123G8
|is_a=EFO:0002091;;FF:0000271
|is_obsolete=
|library_id=CNhs12370
|library_id_phase_based=2:CNhs12370
|microRNAs=
|microRNAs_nn=
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;11754
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;11754
|name=mesenchymal precursor cell - cardiac, donor3
|namespace=FANTOM5
|part_of=
|profile_cagescan=,,,
|profile_hcage=CNhs12370,LSID914,release011,COMPLETED
|profile_rnaseq=
|profile_srnaseq=,,,
|refex=http://refex.dbcls.jp/genelist.php?lang
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|rna_box=123
|rna_catalog_number=
|rna_concentration=0.57593
|rna_extraction_protocol=
|rna_lot_number=
|rna_od260/230=2.12
|rna_od260/280=2.05
|rna_position=G8
|rna_rin=
|rna_sample_type=
|rna_tube_id=123G8
|rna_weight_ug=43.19475
|sample_age=
|sample_category=primary cells
|sample_cell_catalog=
|sample_cell_line=
|sample_cell_lot=HH-394-AD
|sample_cell_type=mesenchymal precursor cell
|sample_collaboration=Claudio Schneider LNCIB
|sample_company=
|sample_description=
|sample_dev_stage=
|sample_disease=
|sample_donor(cell lot)=
|sample_ethnicity=
|sample_experimental_condition=
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;7.24016713504823e-231!GO:0005737;cytoplasm;2.40079395285291e-190!GO:0043231;intracellular membrane-bound organelle;9.77250704983332e-182!GO:0043227;membrane-bound organelle;2.1419722375895e-181!GO:0043226;organelle;4.2605363600351e-181!GO:0043229;intracellular organelle;8.37145613658097e-181!GO:0044444;cytoplasmic part;1.13316436746124e-139!GO:0044422;organelle part;2.06019641780819e-136!GO:0044446;intracellular organelle part;5.85907290692222e-135!GO:0032991;macromolecular complex;4.62378261278198e-92!GO:0030529;ribonucleoprotein complex;3.00584237935953e-89!GO:0044237;cellular metabolic process;2.57235841911011e-84!GO:0044238;primary metabolic process;2.57235841911011e-84!GO:0005515;protein binding;1.20832155819125e-77!GO:0043170;macromolecule metabolic process;1.5536979424354e-76!GO:0043233;organelle lumen;5.50115618789652e-71!GO:0031974;membrane-enclosed lumen;5.50115618789652e-71!GO:0044428;nuclear part;2.94466247935571e-66!GO:0003723;RNA binding;4.21490208256952e-66!GO:0005739;mitochondrion;9.52817712366963e-66!GO:0005634;nucleus;2.27678793191796e-65!GO:0005840;ribosome;5.06725488260793e-55!GO:0006412;translation;1.20147636503409e-51!GO:0031090;organelle membrane;2.17749850467924e-51!GO:0003735;structural constituent of ribosome;8.19522391980003e-49!GO:0019538;protein metabolic process;4.73646871544815e-48!GO:0006396;RNA processing;5.77016766027969e-46!GO:0009058;biosynthetic process;5.28782901495609e-45!GO:0016043;cellular component organization and biogenesis;5.01485706566393e-44!GO:0043234;protein complex;1.02826825004898e-43!GO:0044429;mitochondrial part;1.68297807635597e-43!GO:0044260;cellular macromolecule metabolic process;1.61013574628216e-42!GO:0044267;cellular protein metabolic process;5.5447045909444e-42!GO:0033279;ribosomal subunit;5.92192052957114e-42!GO:0015031;protein transport;6.17496453620133e-42!GO:0033036;macromolecule localization;1.33309777058211e-41!GO:0009059;macromolecule biosynthetic process;2.35737169395043e-41!GO:0005829;cytosol;2.63458193328598e-41!GO:0031981;nuclear lumen;1.46949029234845e-40!GO:0044249;cellular biosynthetic process;1.99323422834093e-40!GO:0043283;biopolymer metabolic process;1.84526426971067e-39!GO:0045184;establishment of protein localization;3.48931196683525e-39!GO:0031967;organelle envelope;4.03037802457107e-39!GO:0008104;protein localization;7.45307275492246e-39!GO:0031975;envelope;9.63013579511017e-39!GO:0010467;gene expression;2.75285425002091e-38!GO:0016071;mRNA metabolic process;3.73759079620535e-35!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;1.40055239097917e-34!GO:0008380;RNA splicing;7.92476239733009e-34!GO:0046907;intracellular transport;1.12100052597832e-31!GO:0006397;mRNA processing;2.88616258895712e-31!GO:0022613;ribonucleoprotein complex biogenesis and assembly;5.05782452717111e-30!GO:0005830;cytosolic ribosome (sensu Eukaryota);5.77723104712491e-30!GO:0005740;mitochondrial envelope;5.97011848796444e-29!GO:0043228;non-membrane-bound organelle;1.35462556427295e-28!GO:0043232;intracellular non-membrane-bound organelle;1.35462556427295e-28!GO:0065003;macromolecular complex assembly;2.05308617007431e-28!GO:0006996;organelle organization and biogenesis;5.58134101205575e-28!GO:0006886;intracellular protein transport;7.39332673682894e-28!GO:0031966;mitochondrial membrane;7.76894174853999e-27!GO:0019866;organelle inner membrane;4.61496324595159e-26!GO:0022607;cellular component assembly;5.06441964768153e-25!GO:0005783;endoplasmic reticulum;1.44226812762638e-24!GO:0005743;mitochondrial inner membrane;1.69036452902085e-24!GO:0005681;spliceosome;3.24406560404541e-24!GO:0006119;oxidative phosphorylation;5.52480505001814e-24!GO:0005654;nucleoplasm;6.21409834679812e-24!GO:0044445;cytosolic part;6.21409834679812e-24!GO:0006259;DNA metabolic process;2.12801323099015e-23!GO:0012505;endomembrane system;5.57348246119859e-22!GO:0015935;small ribosomal subunit;1.19191251252038e-21!GO:0015934;large ribosomal subunit;2.56084376087371e-21!GO:0006457;protein folding;3.11427715559219e-21!GO:0007049;cell cycle;1.70677590227028e-20!GO:0044455;mitochondrial membrane part;2.40100908297561e-20!GO:0016462;pyrophosphatase activity;2.60344463144618e-20!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;3.67724785836479e-20!GO:0016817;hydrolase activity, acting on acid anhydrides;5.4791048170927e-20!GO:0051649;establishment of cellular localization;7.93971695910928e-20!GO:0044432;endoplasmic reticulum part;1.07323768487926e-19!GO:0051641;cellular localization;1.15715114529674e-19!GO:0017111;nucleoside-triphosphatase activity;2.26782862802839e-19!GO:0044451;nucleoplasm part;2.53834294419545e-19!GO:0003676;nucleic acid binding;2.6572829044458e-19!GO:0000166;nucleotide binding;2.05225765310334e-18!GO:0005746;mitochondrial respiratory chain;4.93370862306957e-18!GO:0031980;mitochondrial lumen;5.78744846392307e-18!GO:0005759;mitochondrial matrix;5.78744846392307e-18!GO:0022618;protein-RNA complex assembly;8.18127465658004e-18!GO:0048770;pigment granule;1.69932645382364e-17!GO:0042470;melanosome;1.69932645382364e-17!GO:0005730;nucleolus;1.79100457193042e-17!GO:0051186;cofactor metabolic process;3.17768581219346e-17!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;3.31071434177523e-17!GO:0008134;transcription factor binding;4.22956256552471e-17!GO:0005794;Golgi apparatus;9.61145767342824e-17!GO:0000502;proteasome complex (sensu Eukaryota);9.61145767342824e-17!GO:0022402;cell cycle process;4.50394304049575e-16!GO:0050136;NADH dehydrogenase (quinone) activity;4.94791204601321e-16!GO:0003954;NADH dehydrogenase activity;4.94791204601321e-16!GO:0008137;NADH dehydrogenase (ubiquinone) activity;4.94791204601321e-16!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);6.6129963553383e-16!GO:0005761;mitochondrial ribosome;1.2271291697143e-15!GO:0000313;organellar ribosome;1.2271291697143e-15!GO:0016070;RNA metabolic process;2.2276677883571e-15!GO:0008135;translation factor activity, nucleic acid binding;6.22906171500838e-15!GO:0006605;protein targeting;6.63831424910425e-15!GO:0000278;mitotic cell cycle;7.0932080526466e-15!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);8.73181477113699e-15!GO:0043285;biopolymer catabolic process;1.09275682445486e-14!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;1.46290184311211e-14!GO:0051603;proteolysis involved in cellular protein catabolic process;1.83830462589486e-14!GO:0044265;cellular macromolecule catabolic process;2.26185941551379e-14!GO:0042775;organelle ATP synthesis coupled electron transport;2.26185941551379e-14!GO:0042773;ATP synthesis coupled electron transport;2.26185941551379e-14!GO:0016874;ligase activity;2.71375462589679e-14!GO:0030964;NADH dehydrogenase complex (quinone);3.15704506740839e-14!GO:0045271;respiratory chain complex I;3.15704506740839e-14!GO:0005747;mitochondrial respiratory chain complex I;3.15704506740839e-14!GO:0019941;modification-dependent protein catabolic process;3.22692792547815e-14!GO:0043632;modification-dependent macromolecule catabolic process;3.22692792547815e-14!GO:0051082;unfolded protein binding;3.89663733255094e-14!GO:0044257;cellular protein catabolic process;4.26260067134334e-14!GO:0048193;Golgi vesicle transport;5.66119823666883e-14!GO:0006511;ubiquitin-dependent protein catabolic process;6.22852596720717e-14!GO:0042175;nuclear envelope-endoplasmic reticulum network;6.45193803961162e-14!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;9.69832089234222e-14!GO:0006512;ubiquitin cycle;1.05568932576452e-13!GO:0009057;macromolecule catabolic process;1.14174686844211e-13!GO:0030163;protein catabolic process;1.18987450525903e-13!GO:0006732;coenzyme metabolic process;1.35090958035084e-13!GO:0005789;endoplasmic reticulum membrane;2.66307212135602e-13!GO:0006974;response to DNA damage stimulus;3.30918508919304e-13!GO:0042254;ribosome biogenesis and assembly;3.84658565272538e-13!GO:0000398;nuclear mRNA splicing, via spliceosome;4.89324487411725e-13!GO:0000375;RNA splicing, via transesterification reactions;4.89324487411725e-13!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;4.89324487411725e-13!GO:0044248;cellular catabolic process;5.48050270932037e-13!GO:0032553;ribonucleotide binding;7.48669108375313e-13!GO:0032555;purine ribonucleotide binding;7.48669108375313e-13!GO:0017076;purine nucleotide binding;8.90593518129439e-13!GO:0005793;ER-Golgi intermediate compartment;1.17625591513381e-12!GO:0009055;electron carrier activity;1.78428511309746e-12!GO:0003743;translation initiation factor activity;4.8935252858531e-12!GO:0048523;negative regulation of cellular process;1.27051962781823e-11!GO:0016192;vesicle-mediated transport;1.37929517392358e-11!GO:0006413;translational initiation;1.60205282646384e-11!GO:0009259;ribonucleotide metabolic process;2.03196471013451e-11!GO:0006163;purine nucleotide metabolic process;3.61296561249258e-11!GO:0000087;M phase of mitotic cell cycle;5.20789321582034e-11!GO:0005694;chromosome;6.85196323047832e-11!GO:0005635;nuclear envelope;7.00286375563196e-11!GO:0007067;mitosis;8.24477179972065e-11!GO:0009150;purine ribonucleotide metabolic process;8.62015944562457e-11!GO:0012501;programmed cell death;1.14458075537825e-10!GO:0003712;transcription cofactor activity;1.16316408604437e-10!GO:0006281;DNA repair;1.36087772006706e-10!GO:0000074;regulation of progression through cell cycle;1.39687814088684e-10!GO:0051726;regulation of cell cycle;1.45611436873358e-10!GO:0043412;biopolymer modification;1.88894588906885e-10!GO:0006915;apoptosis;2.16227442197121e-10!GO:0006164;purine nucleotide biosynthetic process;2.35803088599327e-10!GO:0006366;transcription from RNA polymerase II promoter;2.93170751927836e-10!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;3.74288041984358e-10!GO:0031965;nuclear membrane;3.80476898361517e-10!GO:0005524;ATP binding;4.49609396944186e-10!GO:0009260;ribonucleotide biosynthetic process;5.10089362123828e-10!GO:0009152;purine ribonucleotide biosynthetic process;5.51377069608762e-10!GO:0016604;nuclear body;6.38767341140008e-10!GO:0048519;negative regulation of biological process;8.17617607757981e-10!GO:0016887;ATPase activity;8.35728138400066e-10!GO:0006446;regulation of translational initiation;8.76312405136512e-10!GO:0016491;oxidoreductase activity;9.75675201528268e-10!GO:0022403;cell cycle phase;1.03665633272114e-09!GO:0032559;adenyl ribonucleotide binding;1.24120466320073e-09!GO:0009199;ribonucleoside triphosphate metabolic process;1.26268151428289e-09!GO:0044427;chromosomal part;1.30170831320324e-09!GO:0009719;response to endogenous stimulus;1.33577068122962e-09!GO:0030554;adenyl nucleotide binding;1.86736785454037e-09!GO:0009205;purine ribonucleoside triphosphate metabolic process;1.90209559553341e-09!GO:0009144;purine nucleoside triphosphate metabolic process;1.90209559553341e-09!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;1.90613521014539e-09!GO:0009141;nucleoside triphosphate metabolic process;1.95754436301392e-09!GO:0006399;tRNA metabolic process;2.0494927037409e-09!GO:0051276;chromosome organization and biogenesis;2.0494927037409e-09!GO:0042623;ATPase activity, coupled;2.31238080011779e-09!GO:0006913;nucleocytoplasmic transport;2.3618794212976e-09!GO:0044453;nuclear membrane part;2.59099061637248e-09!GO:0008219;cell death;2.70793924867078e-09!GO:0016265;death;2.70793924867078e-09!GO:0005788;endoplasmic reticulum lumen;3.00820554064277e-09!GO:0006464;protein modification process;3.39636118000333e-09!GO:0006260;DNA replication;4.26660529611963e-09!GO:0051301;cell division;4.54784944525018e-09!GO:0009060;aerobic respiration;4.65038992341404e-09!GO:0051169;nuclear transport;4.89009457756091e-09!GO:0009142;nucleoside triphosphate biosynthetic process;4.98678009952382e-09!GO:0009201;ribonucleoside triphosphate biosynthetic process;4.98678009952382e-09!GO:0015986;ATP synthesis coupled proton transport;5.31620268653514e-09!GO:0015985;energy coupled proton transport, down electrochemical gradient;5.31620268653514e-09!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;7.58044743239931e-09!GO:0009145;purine nucleoside triphosphate biosynthetic process;7.58044743239931e-09!GO:0006888;ER to Golgi vesicle-mediated transport;8.86547392587905e-09!GO:0045333;cellular respiration;1.04807090312691e-08!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;1.40110782965229e-08!GO:0006364;rRNA processing;1.50596346018214e-08!GO:0006325;establishment and/or maintenance of chromatin architecture;1.62522368377288e-08!GO:0051188;cofactor biosynthetic process;1.8715778660076e-08!GO:0008639;small protein conjugating enzyme activity;2.08252062694716e-08!GO:0030532;small nuclear ribonucleoprotein complex;2.09075241703009e-08!GO:0046034;ATP metabolic process;2.19468363723252e-08!GO:0009056;catabolic process;2.19468363723252e-08!GO:0003924;GTPase activity;2.77426415351611e-08!GO:0016072;rRNA metabolic process;3.38656452799394e-08!GO:0004842;ubiquitin-protein ligase activity;3.7648801400531e-08!GO:0017038;protein import;3.81963933445005e-08!GO:0004386;helicase activity;3.9646326845926e-08!GO:0006323;DNA packaging;4.24122285769701e-08!GO:0016607;nuclear speck;4.25672230400434e-08!GO:0019787;small conjugating protein ligase activity;4.92839234290616e-08!GO:0008565;protein transporter activity;6.5753623293344e-08!GO:0030120;vesicle coat;7.02032693983781e-08!GO:0030662;coated vesicle membrane;7.02032693983781e-08!GO:0008026;ATP-dependent helicase activity;7.34763416526251e-08!GO:0006754;ATP biosynthetic process;7.38434092623842e-08!GO:0006753;nucleoside phosphate metabolic process;7.38434092623842e-08!GO:0050794;regulation of cellular process;8.0196179996822e-08!GO:0019829;cation-transporting ATPase activity;9.35937049468744e-08!GO:0006099;tricarboxylic acid cycle;1.0260142721861e-07!GO:0046356;acetyl-CoA catabolic process;1.0260142721861e-07!GO:0000279;M phase;1.06441551630901e-07!GO:0006461;protein complex assembly;1.28399768075031e-07!GO:0016879;ligase activity, forming carbon-nitrogen bonds;1.31834835829195e-07!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;1.35835541868118e-07!GO:0051246;regulation of protein metabolic process;1.42602067798589e-07!GO:0051187;cofactor catabolic process;1.56995625518122e-07!GO:0044431;Golgi apparatus part;1.59921523284019e-07!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;1.60504428467118e-07!GO:0004812;aminoacyl-tRNA ligase activity;1.60504428467118e-07!GO:0016875;ligase activity, forming carbon-oxygen bonds;1.60504428467118e-07!GO:0043038;amino acid activation;2.08389691142424e-07!GO:0006418;tRNA aminoacylation for protein translation;2.08389691142424e-07!GO:0043039;tRNA aminoacylation;2.08389691142424e-07!GO:0065002;intracellular protein transport across a membrane;2.44230165169179e-07!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;2.51606693821099e-07!GO:0065004;protein-DNA complex assembly;2.65073661354536e-07!GO:0016853;isomerase activity;2.81592508935692e-07!GO:0031324;negative regulation of cellular metabolic process;3.12692694705873e-07!GO:0043687;post-translational protein modification;3.59556445176691e-07!GO:0009117;nucleotide metabolic process;3.60640763238184e-07!GO:0043069;negative regulation of programmed cell death;3.93300763594095e-07!GO:0016881;acid-amino acid ligase activity;4.08996604744562e-07!GO:0005768;endosome;4.12199895014563e-07!GO:0009109;coenzyme catabolic process;4.38976290707088e-07!GO:0006084;acetyl-CoA metabolic process;4.43601819328014e-07!GO:0043067;regulation of programmed cell death;5.23693487840776e-07!GO:0006916;anti-apoptosis;5.36072419703014e-07!GO:0015078;hydrogen ion transmembrane transporter activity;6.05676500727196e-07!GO:0005643;nuclear pore;6.0691825978712e-07!GO:0005839;proteasome core complex (sensu Eukaryota);6.56465720502416e-07!GO:0042981;regulation of apoptosis;6.81994245631581e-07!GO:0043066;negative regulation of apoptosis;7.53902912843496e-07!GO:0016787;hydrolase activity;8.2439299691983e-07!GO:0009108;coenzyme biosynthetic process;9.97719059808238e-07!GO:0043566;structure-specific DNA binding;1.0001605998051e-06!GO:0003697;single-stranded DNA binding;1.0001605998051e-06!GO:0016564;transcription repressor activity;1.0001605998051e-06!GO:0016469;proton-transporting two-sector ATPase complex;1.04231219918452e-06!GO:0006752;group transfer coenzyme metabolic process;1.13741153777777e-06!GO:0045259;proton-transporting ATP synthase complex;1.26362304676411e-06!GO:0006333;chromatin assembly or disassembly;1.27113076438945e-06!GO:0000785;chromatin;1.32710299350262e-06!GO:0048475;coated membrane;1.37100955457557e-06!GO:0030117;membrane coat;1.37100955457557e-06!GO:0003714;transcription corepressor activity;1.47182890741468e-06!GO:0015630;microtubule cytoskeleton;1.64109116590639e-06!GO:0045786;negative regulation of progression through cell cycle;1.66951181514413e-06!GO:0007249;I-kappaB kinase/NF-kappaB cascade;1.78563563132948e-06!GO:0000245;spliceosome assembly;2.89819949990333e-06!GO:0008654;phospholipid biosynthetic process;3.11462417230287e-06!GO:0006091;generation of precursor metabolites and energy;3.25547083913639e-06!GO:0009892;negative regulation of metabolic process;3.37895933399408e-06!GO:0004298;threonine endopeptidase activity;3.64987314406363e-06!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;3.66688932378691e-06!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;3.73637812010347e-06!GO:0005667;transcription factor complex;4.15699709525041e-06!GO:0007005;mitochondrion organization and biogenesis;4.33730618106462e-06!GO:0016859;cis-trans isomerase activity;4.57829645945617e-06!GO:0016740;transferase activity;5.13602500864924e-06!GO:0006613;cotranslational protein targeting to membrane;5.14050356786954e-06!GO:0000139;Golgi membrane;5.8941915104157e-06!GO:0006403;RNA localization;5.89463667886683e-06!GO:0046930;pore complex;6.50026295982358e-06!GO:0005762;mitochondrial large ribosomal subunit;6.51968746572383e-06!GO:0000315;organellar large ribosomal subunit;6.51968746572383e-06!GO:0005525;GTP binding;6.89064934614616e-06!GO:0050657;nucleic acid transport;6.95702005853663e-06!GO:0051236;establishment of RNA localization;6.95702005853663e-06!GO:0050658;RNA transport;6.95702005853663e-06!GO:0044440;endosomal part;8.79422774048286e-06!GO:0010008;endosome membrane;8.79422774048286e-06!GO:0051170;nuclear import;9.58928700937129e-06!GO:0016779;nucleotidyltransferase activity;1.04694605771053e-05!GO:0031202;RNA splicing factor activity, transesterification mechanism;1.28785005538393e-05!GO:0005798;Golgi-associated vesicle;1.54599351048151e-05!GO:0032446;protein modification by small protein conjugation;1.61568193061521e-05!GO:0016563;transcription activator activity;1.62463548492537e-05!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;1.74299872437973e-05!GO:0006334;nucleosome assembly;1.76211817868975e-05!GO:0005770;late endosome;1.98553204821974e-05!GO:0006606;protein import into nucleus;1.99900268506638e-05!GO:0019843;rRNA binding;2.01539896367228e-05!GO:0016567;protein ubiquitination;2.44741351258296e-05!GO:0045454;cell redox homeostasis;2.48314860454025e-05!GO:0016023;cytoplasmic membrane-bound vesicle;2.48472070231614e-05!GO:0031988;membrane-bound vesicle;2.58323662997779e-05!GO:0005813;centrosome;2.75898789837071e-05!GO:0048522;positive regulation of cellular process;2.97025794667268e-05!GO:0015980;energy derivation by oxidation of organic compounds;3.47042095939873e-05!GO:0030867;rough endoplasmic reticulum membrane;3.66620548777977e-05!GO:0031252;leading edge;3.72759689872452e-05!GO:0015077;monovalent inorganic cation transmembrane transporter activity;4.26439663330829e-05!GO:0005773;vacuole;4.28457913552745e-05!GO:0016568;chromatin modification;4.37825964684183e-05!GO:0003724;RNA helicase activity;4.55479943724346e-05!GO:0016481;negative regulation of transcription;4.74639167180032e-05!GO:0008361;regulation of cell size;4.79149926307595e-05!GO:0006357;regulation of transcription from RNA polymerase II promoter;5.01863011955271e-05!GO:0032561;guanyl ribonucleotide binding;5.03213750309265e-05!GO:0019001;guanyl nucleotide binding;5.03213750309265e-05!GO:0000314;organellar small ribosomal subunit;5.1245389513068e-05!GO:0005763;mitochondrial small ribosomal subunit;5.1245389513068e-05!GO:0006793;phosphorus metabolic process;5.1245389513068e-05!GO:0006796;phosphate metabolic process;5.1245389513068e-05!GO:0016049;cell growth;5.38206582139793e-05!GO:0031497;chromatin assembly;5.54081323078611e-05!GO:0019867;outer membrane;5.75218063299365e-05!GO:0050789;regulation of biological process;5.75218063299365e-05!GO:0043021;ribonucleoprotein binding;6.14193252879949e-05!GO:0031982;vesicle;6.51444677966522e-05!GO:0001558;regulation of cell growth;6.87748637195903e-05!GO:0031410;cytoplasmic vesicle;7.15072865793254e-05!GO:0031968;organelle outer membrane;7.71132649765601e-05!GO:0003713;transcription coactivator activity;7.96164362108227e-05!GO:0006612;protein targeting to membrane;8.34891855360807e-05!GO:0033116;ER-Golgi intermediate compartment membrane;8.34891855360807e-05!GO:0005815;microtubule organizing center;8.40124303958259e-05!GO:0000151;ubiquitin ligase complex;9.11002402261113e-05!GO:0051329;interphase of mitotic cell cycle;0.000101598714286826!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;0.000128762010544655!GO:0016126;sterol biosynthetic process;0.000133966016203399!GO:0030036;actin cytoskeleton organization and biogenesis;0.000144569996129667!GO:0005819;spindle;0.000147181935624279!GO:0051028;mRNA transport;0.000159845636150118!GO:0005769;early endosome;0.000168501617485427!GO:0005048;signal sequence binding;0.00017717911058103!GO:0051789;response to protein stimulus;0.00018339462016732!GO:0006986;response to unfolded protein;0.00018339462016732!GO:0030133;transport vesicle;0.000190934509261497!GO:0006950;response to stress;0.000195799379353694!GO:0051427;hormone receptor binding;0.000199720337918046!GO:0016310;phosphorylation;0.000209877767778366!GO:0043623;cellular protein complex assembly;0.000220599770660777!GO:0004576;oligosaccharyl transferase activity;0.000247362375452403!GO:0003899;DNA-directed RNA polymerase activity;0.000250358923901708!GO:0005905;coated pit;0.000263994266689462!GO:0000323;lytic vacuole;0.000267355035922843!GO:0005764;lysosome;0.000267355035922843!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.000273413565664714!GO:0051325;interphase;0.000293657495584074!GO:0008250;oligosaccharyl transferase complex;0.000321519775769795!GO:0007051;spindle organization and biogenesis;0.000353406445040761!GO:0005885;Arp2/3 protein complex;0.000374746059392958!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.000391982574324839!GO:0046474;glycerophospholipid biosynthetic process;0.000397101531696519!GO:0035257;nuclear hormone receptor binding;0.000421726100617034!GO:0030663;COPI coated vesicle membrane;0.000427431334874353!GO:0030126;COPI vesicle coat;0.000427431334874353!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.000428448986464616!GO:0009165;nucleotide biosynthetic process;0.000445565281787899!GO:0005741;mitochondrial outer membrane;0.000492698760186801!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000591018866516541!GO:0043681;protein import into mitochondrion;0.000649131035508782!GO:0005791;rough endoplasmic reticulum;0.000656717371588599!GO:0006414;translational elongation;0.000656848028263017!GO:0018196;peptidyl-asparagine modification;0.000660873092470792!GO:0018279;protein amino acid N-linked glycosylation via asparagine;0.000660873092470792!GO:0006261;DNA-dependent DNA replication;0.000674633028066189!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.000680317802099313!GO:0007010;cytoskeleton organization and biogenesis;0.000753333408287315!GO:0016363;nuclear matrix;0.000756631736883843!GO:0046467;membrane lipid biosynthetic process;0.000817614886102231!GO:0051920;peroxiredoxin activity;0.000817614886102231!GO:0065009;regulation of a molecular function;0.000817614886102231!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.000819123541990628!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;0.000832766430551851!GO:0008610;lipid biosynthetic process;0.000850213853926426!GO:0031072;heat shock protein binding;0.000983419831469367!GO:0045935;positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.00100898797871521!GO:0006626;protein targeting to mitochondrion;0.00104611869155229!GO:0046489;phosphoinositide biosynthetic process;0.00106953848656081!GO:0051252;regulation of RNA metabolic process;0.00108272383423302!GO:0030029;actin filament-based process;0.00110022250863019!GO:0030176;integral to endoplasmic reticulum membrane;0.0011390267949476!GO:0019222;regulation of metabolic process;0.0011743849200721!GO:0030137;COPI-coated vesicle;0.00121927237176362!GO:0000075;cell cycle checkpoint;0.00123698251800645!GO:0006695;cholesterol biosynthetic process;0.00123698251800645!GO:0007050;cell cycle arrest;0.00123698251800645!GO:0007243;protein kinase cascade;0.00127325705608297!GO:0000775;chromosome, pericentric region;0.00129182082269831!GO:0016627;oxidoreductase activity, acting on the CH-CH group of donors;0.00133717109572177!GO:0016772;transferase activity, transferring phosphorus-containing groups;0.00140471078331613!GO:0008186;RNA-dependent ATPase activity;0.00143811591464877!GO:0016765;transferase activity, transferring alkyl or aryl (other than methyl) groups;0.00146552378555561!GO:0045941;positive regulation of transcription;0.00146552378555561!GO:0006979;response to oxidative stress;0.00152948780650177!GO:0048500;signal recognition particle;0.00155058689300469!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00160829175389281!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00160829175389281!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00160829175389281!GO:0003690;double-stranded DNA binding;0.00165843389596181!GO:0006891;intra-Golgi vesicle-mediated transport;0.00169624449628109!GO:0005852;eukaryotic translation initiation factor 3 complex;0.0017705766979095!GO:0051045;negative regulation of membrane protein ectodomain proteolysis;0.00183097411756381!GO:0051043;regulation of membrane protein ectodomain proteolysis;0.00183097411756381!GO:0000079;regulation of cyclin-dependent protein kinase activity;0.00186201317543587!GO:0044262;cellular carbohydrate metabolic process;0.00186518728290479!GO:0003729;mRNA binding;0.00192455714563927!GO:0006383;transcription from RNA polymerase III promoter;0.00193053140685029!GO:0045893;positive regulation of transcription, DNA-dependent;0.00196412274329194!GO:0046483;heterocycle metabolic process;0.00204807171169627!GO:0008033;tRNA processing;0.00206865890277783!GO:0043284;biopolymer biosynthetic process;0.00220744589867237!GO:0019899;enzyme binding;0.00225437708217959!GO:0048518;positive regulation of biological process;0.00243930856369163!GO:0016044;membrane organization and biogenesis;0.00249778592964001!GO:0005657;replication fork;0.00251691895290644!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.0026216816757317!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.0026216816757317!GO:0015992;proton transport;0.00271844995025254!GO:0005684;U2-dependent spliceosome;0.00286858052675669!GO:0044452;nucleolar part;0.00290060841312976!GO:0006818;hydrogen transport;0.00302884784832103!GO:0008094;DNA-dependent ATPase activity;0.00302965513317931!GO:0040008;regulation of growth;0.00310016930031318!GO:0016281;eukaryotic translation initiation factor 4F complex;0.00323967937333798!GO:0008312;7S RNA binding;0.00329208872854784!GO:0016862;intramolecular oxidoreductase activity, interconverting keto- and enol-groups;0.00337597573949905!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.00338571342943399!GO:0045047;protein targeting to ER;0.00338571342943399!GO:0008180;signalosome;0.00345731831576422!GO:0004004;ATP-dependent RNA helicase activity;0.0035635025466646!GO:0043488;regulation of mRNA stability;0.00390290288620492!GO:0043487;regulation of RNA stability;0.00390290288620492!GO:0045892;negative regulation of transcription, DNA-dependent;0.00394855024309451!GO:0003684;damaged DNA binding;0.00408607679906627!GO:0030658;transport vesicle membrane;0.00415816509877189!GO:0065007;biological regulation;0.00418521474126855!GO:0030132;clathrin coat of coated pit;0.00435905993894643!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.00448610357549933!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;0.00462728794392486!GO:0015399;primary active transmembrane transporter activity;0.00462728794392486!GO:0051168;nuclear export;0.00462851589006039!GO:0030880;RNA polymerase complex;0.00471362838043724!GO:0016628;oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor;0.00471362838043724!GO:0000776;kinetochore;0.00498750315321062!GO:0007006;mitochondrial membrane organization and biogenesis;0.00504712800443964!GO:0042802;identical protein binding;0.00507343242551558!GO:0015631;tubulin binding;0.00557702844169651!GO:0008632;apoptotic program;0.00563415791732919!GO:0030134;ER to Golgi transport vesicle;0.00580665151922818!GO:0030127;COPII vesicle coat;0.00604805371249169!GO:0012507;ER to Golgi transport vesicle membrane;0.00604805371249169!GO:0048471;perinuclear region of cytoplasm;0.00608476519224538!GO:0016706;oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors;0.00617814549317608!GO:0033673;negative regulation of kinase activity;0.00625565686944422!GO:0006469;negative regulation of protein kinase activity;0.00625565686944422!GO:0000082;G1/S transition of mitotic cell cycle;0.00658781252560201!GO:0030027;lamellipodium;0.00659131275764152!GO:0019752;carboxylic acid metabolic process;0.00661685025260673!GO:0003711;transcription elongation regulator activity;0.00675347619244157!GO:0005869;dynactin complex;0.00677765191528828!GO:0030521;androgen receptor signaling pathway;0.00687302846442744!GO:0008139;nuclear localization sequence binding;0.00690947049228435!GO:0017166;vinculin binding;0.0070723339898583!GO:0006082;organic acid metabolic process;0.007073571556341!GO:0006595;polyamine metabolic process;0.00716813498876106!GO:0000339;RNA cap binding;0.00718885978253284!GO:0003678;DNA helicase activity;0.00749881230735528!GO:0016408;C-acyltransferase activity;0.00751355193292555!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.00785010829378563!GO:0015002;heme-copper terminal oxidase activity;0.00785010829378563!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.00785010829378563!GO:0004129;cytochrome-c oxidase activity;0.00785010829378563!GO:0048487;beta-tubulin binding;0.00794852026980043!GO:0051348;negative regulation of transferase activity;0.00796879824743454!GO:0035258;steroid hormone receptor binding;0.00831034782807374!GO:0030041;actin filament polymerization;0.00854653783892894!GO:0007264;small GTPase mediated signal transduction;0.00859863502096246!GO:0000786;nucleosome;0.00866204003542729!GO:0051087;chaperone binding;0.00869230376555185!GO:0006302;double-strand break repair;0.00869230376555185!GO:0006509;membrane protein ectodomain proteolysis;0.00914728338470984!GO:0033619;membrane protein proteolysis;0.00914728338470984!GO:0007088;regulation of mitosis;0.00915829903359803!GO:0006839;mitochondrial transport;0.00920045331424562!GO:0000059;protein import into nucleus, docking;0.00935640394303042!GO:0055029;nuclear DNA-directed RNA polymerase complex;0.00952045477346575!GO:0000428;DNA-directed RNA polymerase complex;0.00952045477346575!GO:0043022;ribosome binding;0.00974611824319067!GO:0003746;translation elongation factor activity;0.00982214797760048!GO:0016272;prefoldin complex;0.00998904414664788!GO:0031901;early endosome membrane;0.010369914312154!GO:0016197;endosome transport;0.010369914312154!GO:0007093;mitotic cell cycle checkpoint;0.010369914312154!GO:0006118;electron transport;0.0105289989146386!GO:0006778;porphyrin metabolic process;0.0105289989146386!GO:0033013;tetrapyrrole metabolic process;0.0105289989146386!GO:0022890;inorganic cation transmembrane transporter activity;0.0105410162006892!GO:0003682;chromatin binding;0.0105818515331798!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.0108033982709263!GO:0030660;Golgi-associated vesicle membrane;0.0109294979566588!GO:0030659;cytoplasmic vesicle membrane;0.0109488634815691!GO:0000049;tRNA binding;0.0112127292273412!GO:0006650;glycerophospholipid metabolic process;0.0114558421236791!GO:0006506;GPI anchor biosynthetic process;0.0115819208157653!GO:0003756;protein disulfide isomerase activity;0.0117080537508603!GO:0016864;intramolecular oxidoreductase activity, transposing S-S bonds;0.0117080537508603!GO:0051052;regulation of DNA metabolic process;0.0118959363198061!GO:0008092;cytoskeletal protein binding;0.0118959363198061!GO:0043161;proteasomal ubiquitin-dependent protein catabolic process;0.0120149457399962!GO:0005832;chaperonin-containing T-complex;0.0120490934556017!GO:0048144;fibroblast proliferation;0.0120930600459817!GO:0048145;regulation of fibroblast proliferation;0.0120930600459817!GO:0005862;muscle thin filament tropomyosin;0.0121465680050091!GO:0019205;nucleobase, nucleoside, nucleotide kinase activity;0.0121924795971748!GO:0008047;enzyme activator activity;0.0124071054318869!GO:0006289;nucleotide-excision repair;0.0125131578013992!GO:0001527;microfibril;0.0126055909823184!GO:0006497;protein amino acid lipidation;0.0128386991156588!GO:0006402;mRNA catabolic process;0.0129022624943657!GO:0043433;negative regulation of transcription factor activity;0.0129280871537434!GO:0008243;plasminogen activator activity;0.0129640802076616!GO:0006352;transcription initiation;0.013127086836653!GO:0016251;general RNA polymerase II transcription factor activity;0.0132729808475851!GO:0009112;nucleobase metabolic process;0.0134175509778439!GO:0006505;GPI anchor metabolic process;0.0138193880140873!GO:0030833;regulation of actin filament polymerization;0.0139153077415083!GO:0009116;nucleoside metabolic process;0.0139153077415083!GO:0006740;NADPH regeneration;0.0140388880867621!GO:0006098;pentose-phosphate shunt;0.0140388880867621!GO:0051540;metal cluster binding;0.0140532314980868!GO:0051536;iron-sulfur cluster binding;0.0140532314980868!GO:0050662;coenzyme binding;0.0141753596289677!GO:0030118;clathrin coat;0.0144042154745686!GO:0050790;regulation of catalytic activity;0.0144111146711362!GO:0007052;mitotic spindle organization and biogenesis;0.0148351067959996!GO:0045792;negative regulation of cell size;0.0150780467621081!GO:0051287;NAD binding;0.0150780467621081!GO:0048146;positive regulation of fibroblast proliferation;0.0155850127695258!GO:0016741;transferase activity, transferring one-carbon groups;0.0157329324158152!GO:0030308;negative regulation of cell growth;0.0158650300601921!GO:0051128;regulation of cellular component organization and biogenesis;0.0159930946903688!GO:0007040;lysosome organization and biogenesis;0.0162866311738151!GO:0030384;phosphoinositide metabolic process;0.0166325253167222!GO:0031124;mRNA 3'-end processing;0.0166325253167222!GO:0031529;ruffle organization and biogenesis;0.0167239641866134!GO:0016860;intramolecular oxidoreductase activity;0.0168558035556536!GO:0050681;androgen receptor binding;0.0169774444067583!GO:0030145;manganese ion binding;0.0169808294152809!GO:0008168;methyltransferase activity;0.0170552616704116!GO:0008154;actin polymerization and/or depolymerization;0.0170552616704116!GO:0042168;heme metabolic process;0.017253317406152!GO:0045045;secretory pathway;0.017463394931861!GO:0016616;oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor;0.0175112741128621!GO:0051539;4 iron, 4 sulfur cluster binding;0.0175404225168401!GO:0030518;steroid hormone receptor signaling pathway;0.0175660607008965!GO:0031418;L-ascorbic acid binding;0.0176419682207586!GO:0005637;nuclear inner membrane;0.0185223799644754!GO:0051101;regulation of DNA binding;0.01864447013174!GO:0004177;aminopeptidase activity;0.0187918575316901!GO:0006417;regulation of translation;0.0188195506751123!GO:0005586;collagen type III;0.0188642969915327!GO:0046519;sphingoid metabolic process;0.0189410577622143!GO:0000096;sulfur amino acid metabolic process;0.0189410577622143!GO:0005758;mitochondrial intermembrane space;0.0189448118322242!GO:0048468;cell development;0.0198284991740367!GO:0044433;cytoplasmic vesicle part;0.0202586552635309!GO:0009967;positive regulation of signal transduction;0.021058318252081!GO:0006401;RNA catabolic process;0.0211016536455771!GO:0015036;disulfide oxidoreductase activity;0.0211016536455771!GO:0005874;microtubule;0.0216957008538552!GO:0045936;negative regulation of phosphate metabolic process;0.0216957008538552!GO:0006354;RNA elongation;0.022477404939876!GO:0043086;negative regulation of catalytic activity;0.0226502997026662!GO:0006693;prostaglandin metabolic process;0.0227406375608836!GO:0006692;prostanoid metabolic process;0.0227406375608836!GO:0022408;negative regulation of cell-cell adhesion;0.0237221903870261!GO:0003702;RNA polymerase II transcription factor activity;0.0237293052494354!GO:0043492;ATPase activity, coupled to movement of substances;0.0237293052494354!GO:0007034;vacuolar transport;0.0238432234641433!GO:0030433;ER-associated protein catabolic process;0.0242170396313989!GO:0006515;misfolded or incompletely synthesized protein catabolic process;0.0242170396313989!GO:0006275;regulation of DNA replication;0.0242257602417026!GO:0000209;protein polyubiquitination;0.0246805677353453!GO:0008022;protein C-terminus binding;0.024941835444678!GO:0030125;clathrin vesicle coat;0.0251370912513807!GO:0030665;clathrin coated vesicle membrane;0.0251370912513807!GO:0006007;glucose catabolic process;0.0252395000290371!GO:0008147;structural constituent of bone;0.0252519545709946!GO:0004527;exonuclease activity;0.0254211186056147!GO:0004003;ATP-dependent DNA helicase activity;0.0258918265939905!GO:0047485;protein N-terminus binding;0.0259884237420059!GO:0007021;tubulin folding;0.02604563162983!GO:0031970;organelle envelope lumen;0.0265839613140277!GO:0016667;oxidoreductase activity, acting on sulfur group of donors;0.0273182555645802!GO:0031902;late endosome membrane;0.027603016375665!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.0277644055313353!GO:0001726;ruffle;0.0284500054188954!GO:0006643;membrane lipid metabolic process;0.0292085604864628!GO:0000122;negative regulation of transcription from RNA polymerase II promoter;0.0292387883413317!GO:0031625;ubiquitin protein ligase binding;0.0300938554305158!GO:0030508;thiol-disulfide exchange intermediate activity;0.0304074711518238!GO:0032984;macromolecular complex disassembly;0.0305237846236464!GO:0005801;cis-Golgi network;0.0308452896001148!GO:0031371;ubiquitin conjugating enzyme complex;0.030870135547302!GO:0006779;porphyrin biosynthetic process;0.032570168614629!GO:0033014;tetrapyrrole biosynthetic process;0.032570168614629!GO:0005669;transcription factor TFIID complex;0.032605954038689!GO:0006376;mRNA splice site selection;0.0328644664984957!GO:0000389;nuclear mRNA 3'-splice site recognition;0.0328644664984957!GO:0006144;purine base metabolic process;0.0330214261126858!GO:0004448;isocitrate dehydrogenase activity;0.0335167237407209!GO:0006672;ceramide metabolic process;0.0335454383742802!GO:0007033;vacuole organization and biogenesis;0.0337346560902484!GO:0042158;lipoprotein biosynthetic process;0.0338498821065038!GO:0006520;amino acid metabolic process;0.0342615443370591!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.0342615443370591!GO:0006378;mRNA polyadenylation;0.0344590155496575!GO:0005138;interleukin-6 receptor binding;0.0347734177876886!GO:0031301;integral to organelle membrane;0.0349958249247357!GO:0000307;cyclin-dependent protein kinase holoenzyme complex;0.0349958249247357!GO:0012506;vesicle membrane;0.0351338796317351!GO:0032508;DNA duplex unwinding;0.0351602578325166!GO:0032392;DNA geometric change;0.0351602578325166!GO:0009225;nucleotide-sugar metabolic process;0.0352440803272183!GO:0017015;regulation of transforming growth factor beta receptor signaling pathway;0.035252140936047!GO:0006611;protein export from nucleus;0.035252140936047!GO:0019798;procollagen-proline dioxygenase activity;0.0353249668121404!GO:0009889;regulation of biosynthetic process;0.0364646877579652!GO:0016780;phosphotransferase activity, for other substituted phosphate groups;0.0366524773407462!GO:0008538;proteasome activator activity;0.0366682816180669!GO:0007030;Golgi organization and biogenesis;0.0367037696666797!GO:0009119;ribonucleoside metabolic process;0.0370976760610142!GO:0050811;GABA receptor binding;0.0370976760610142!GO:0030149;sphingolipid catabolic process;0.0374920025362506!GO:0006310;DNA recombination;0.0376484833903389!GO:0005581;collagen;0.0381463066071506!GO:0000226;microtubule cytoskeleton organization and biogenesis;0.0381499777194627!GO:0051059;NF-kappaB binding;0.038241919641724!GO:0006749;glutathione metabolic process;0.0382635588152333!GO:0005784;translocon complex;0.0391438006898109!GO:0008283;cell proliferation;0.039362392409198!GO:0008637;apoptotic mitochondrial changes;0.0396030337195196!GO:0030911;TPR domain binding;0.0397512179184211!GO:0031323;regulation of cellular metabolic process;0.0397942829576282!GO:0016407;acetyltransferase activity;0.0402589890594313!GO:0031227;intrinsic to endoplasmic reticulum membrane;0.0402589890594313!GO:0006220;pyrimidine nucleotide metabolic process;0.0403804283582832!GO:0031543;peptidyl-proline dioxygenase activity;0.0406100425587575!GO:0031326;regulation of cellular biosynthetic process;0.0407951658420278!GO:0006790;sulfur metabolic process;0.0408952148415383!GO:0043065;positive regulation of apoptosis;0.0409789758289765!GO:0030865;cortical cytoskeleton organization and biogenesis;0.0417487280747487!GO:0004518;nuclease activity;0.0422526553284976!GO:0043068;positive regulation of programmed cell death;0.0423468008985688!GO:0009303;rRNA transcription;0.0429013128972261!GO:0016614;oxidoreductase activity, acting on CH-OH group of donors;0.0429143507612084!GO:0001953;negative regulation of cell-matrix adhesion;0.0430038820220367!GO:0046128;purine ribonucleoside metabolic process;0.0430038820220367!GO:0042278;purine nucleoside metabolic process;0.0430038820220367!GO:0000030;mannosyltransferase activity;0.043054829353347!GO:0004228;gelatinase A activity;0.0431458668991906!GO:0001955;blood vessel maturation;0.0431458668991906!GO:0047115;trans-1,2-dihydrobenzene-1,2-diol dehydrogenase activity;0.0433614312408429!GO:0022415;viral reproductive process;0.0434321241307354!GO:0051271;negative regulation of cell motility;0.0434682730553146!GO:0006720;isoprenoid metabolic process;0.0435444886043202!GO:0005092;GDP-dissociation inhibitor activity;0.0444562165084556!GO:0000910;cytokinesis;0.044609830693918!GO:0000792;heterochromatin;0.0451361316046793!GO:0000178;exosome (RNase complex);0.0452211922362105!GO:0004287;prolyl oligopeptidase activity;0.0459481675829646!GO:0032940;secretion by cell;0.0470271966339916!GO:0005665;DNA-directed RNA polymerase II, core complex;0.0470271966339916!GO:0006368;RNA elongation from RNA polymerase II promoter;0.0476420139102299!GO:0042326;negative regulation of phosphorylation;0.0476521650280527!GO:0006739;NADP metabolic process;0.0478191892096153!GO:0008299;isoprenoid biosynthetic process;0.0483414843349686!GO:0043241;protein complex disassembly;0.0483414843349686!GO:0035035;histone acetyltransferase binding;0.0488569419592868!GO:0006892;post-Golgi vesicle-mediated transport;0.0493014098323993!GO:0008475;procollagen-lysine 5-dioxygenase activity;0.0494909529040262!GO:0002763;positive regulation of myeloid leukocyte differentiation;0.049500549529567!GO:0003988;acetyl-CoA C-acyltransferase activity;0.049500549529567!GO:0033559;unsaturated fatty acid metabolic process;0.049500549529567!GO:0006636;unsaturated fatty acid biosynthetic process;0.049500549529567!GO:0022406;membrane docking;0.0496354991303197!GO:0048278;vesicle docking;0.0496354991303197
|sample_id=11754
|sample_note=
|sample_sex=
|sample_species=Human (Homo sapiens)
|sample_strain=
|sample_tissue=heart
|top_motifs=ALX4:2.46212624135;NKX3-1:1.59553030655;HOX{A5,B5}:1.41586456434;HSF1,2:1.39839250534;ZNF238:1.26744761369;TAL1_TCF{3,4,12}:1.23018667415;IKZF1:1.21232636368;PAX1,9:1.14875043714;NFATC1..3:1.04239649373;FOX{I1,J2}:1.0365967427;HES1:1.02440241029;ALX1:1.02151530055;EBF1:1.01862660527;ZNF384:0.987594186356;EN1,2:0.962559277808;PAX8:0.959375956407;GZF1:0.940385428272;UFEwm:0.917342917746;MYBL2:0.879377812948;HOX{A4,D4}:0.867334170506;EVI1:0.803520095111;MAFB:0.783180308927;TLX1..3_NFIC{dimer}:0.761781199369;HMX1:0.753205060893;TEAD1:0.721095179535;AR:0.700123605016;GATA4:0.691232982124;NANOG{mouse}:0.67306423223;GLI1..3:0.66355138598;ESR1:0.648589422819;NR3C1:0.62527260473;PBX1:0.623991062795;ATF6:0.594875312347;RXRA_VDR{dimer}:0.567506113806;KLF4:0.5490547287;BACH2:0.543492632254;GFI1B:0.543107005841;SRF:0.53623980309;PRDM1:0.529901770353;TBX4,5:0.529804086992;NFIX:0.524295327463;ELK1,4_GABP{A,B1}:0.523255081995;FOS_FOS{B,L1}_JUN{B,D}:0.521844483226;GTF2I:0.501391275475;LHX3,4:0.49767535108;ZNF423:0.497409559279;FOXL1:0.492904595852;XBP1:0.487402246299;NFE2L2:0.478258664351;XCPE1{core}:0.477991737013;CRX:0.47417033643;GTF2A1,2:0.463748739604;TFCP2:0.449058704028;YY1:0.449030548102;GFI1:0.409460171039;HAND1,2:0.407879633696;HMGA1,2:0.401290804633;CDC5L:0.393468612891;DBP:0.368133656404;PAX4:0.364684028161;HLF:0.36118928117;AIRE:0.360203051008;SOX17:0.346597903093;ZIC1..3:0.328886435871;PATZ1:0.326804004747;TBP:0.322308100294;MZF1:0.306050419326;TP53:0.27715095449;CREB1:0.273959139138;RFX1:0.266785230844;bHLH_family:0.263857903901;AHR_ARNT_ARNT2:0.26236954229;FOXQ1:0.256131371988;RXR{A,B,G}:0.248587647165;JUN:0.226906835679;FOXM1:0.224742989078;SOX2:0.219433324678;FOSL2:0.21596696829;TLX2:0.203764496219;ZBTB6:0.193343484236;SMAD1..7,9:0.190279045889;NKX2-2,8:0.181711757204;POU3F1..4:0.174743365931;ARID5B:0.174373282099;TEF:0.149671597044;MAZ:0.139742230599;ZNF143:0.132937573916;POU1F1:0.129893464025;STAT2,4,6:0.125173233499;PAX2:0.115927151067;TFDP1:0.10830647498;ATF5_CREB3:0.101148619506;GCM1,2:0.0778850992126;TFAP2B:0.0723442921585;RUNX1..3:0.0706025583117;ATF2:0.0658485422223;NFE2:0.0626279990959;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:0.0518988112165;PDX1:0.0473042115803;HIF1A:0.0347356554379;ZBTB16:0.0326410702348;NHLH1,2:0.0313107334118;MYB:0.017196193787;PRRX1,2:0.0168202598578;NRF1:0.00528875438668;STAT1,3:0.00432270302229;HNF1A:-0.000428812447392;ELF1,2,4:-0.000530964779895;SPZ1:-0.00118166254097;FOXP3:-0.0019504019929;NFIL3:-0.00354272009593;CDX1,2,4:-0.0189268422192;MTE{core}:-0.0273792230674;E2F1..5:-0.0297458915128;HBP1_HMGB_SSRP1_UBTF:-0.0450432359602;NFKB1_REL_RELA:-0.0451430804512;ZNF148:-0.046691408057;HIC1:-0.0482745113885;TFAP4:-0.0743723975316;NR1H4:-0.0770197118266;ESRRA:-0.0829615426092;PPARG:-0.0945155697943;NKX2-1,4:-0.0951354670555;NR6A1:-0.0979011375488;POU6F1:-0.101653337184;FOXD3:-0.105339844266;CEBPA,B_DDIT3:-0.108924434021;POU5F1:-0.136763063191;EGR1..3:-0.139526848854;SOX{8,9,10}:-0.153061123281;NFY{A,B,C}:-0.154978104825;RREB1:-0.156430251735;MYFfamily:-0.15900221498;NKX6-1,2:-0.161097997033;SOX5:-0.186128915349;NFE2L1:-0.186576700604;RBPJ:-0.19872321345;REST:-0.200349515467;EP300:-0.22370574752;MED-1{core}:-0.224363843747;NKX3-2:-0.224864655795;HOXA9_MEIS1:-0.230182357712;IRF1,2:-0.240833712542;BPTF:-0.253350677019;NR5A1,2:-0.26150290659;PAX5:-0.272679151206;MEF2{A,B,C,D}:-0.279162801878;LEF1_TCF7_TCF7L1,2:-0.297806770887;ZFP161:-0.310599628544;MTF1:-0.311748604453;TFAP2{A,C}:-0.31952108021;HOX{A6,A7,B6,B7}:-0.329648612206;PAX3,7:-0.33211505854;POU2F1..3:-0.345829638479;HNF4A_NR2F1,2:-0.363161581048;TOPORS:-0.373863200671;GATA6:-0.394234125037;FOXN1:-0.407060978037;ONECUT1,2:-0.425480666866;SPI1:-0.433602960915;ETS1,2:-0.435639443081;IRF7:-0.47759668375;SPIB:-0.500266761444;SREBF1,2:-0.500550991762;FOX{D1,D2}:-0.534296602069;ATF4:-0.550581479118;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.561601586788;FOXO1,3,4:-0.575836634877;FOXP1:-0.583726764086;TGIF1:-0.583782017599;IKZF2:-0.598659367913;DMAP1_NCOR{1,2}_SMARC:-0.604668504557;PAX6:-0.607743238247;SP1:-0.638645231288;NANOG:-0.642923878692;VSX1,2:-0.662705604403;BREu{core}:-0.697022095093;CUX2:-0.713188192759;STAT5{A,B}:-0.717929764181;OCT4_SOX2{dimer}:-0.791448791264;RFX2..5_RFXANK_RFXAP:-0.816514874911;LMO2:-0.845751274711;SNAI1..3:-0.899911926854;ADNP_IRX_SIX_ZHX:-0.904218099226;T:-0.913849398417;RORA:-0.931484801153;FOXA2:-1.00091422817;ZEB1:-1.01020348061;NKX2-3_NKX2-5:-1.12391255587;FOX{F1,F2,J1}:-1.40670130571;PITX1..3:-1.49531729777;MYOD1:-1.74087620913
|xref=
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:11754-123G8;search_select_hide=table117:FF:11754-123G8
}}
}}

Latest revision as of 18:17, 4 June 2020

Name:mesenchymal precursor cell - cardiac, donor3
Species:Human (Homo sapiens)
Library ID:CNhs12370
Sample type:primary cells
Genomic View: UCSC
RefEX:Specific genes
FANTOM CAT:1, 2, 3, 4, 5, 6, 7, 8
CAGEd-oPOSSUM:link
ZENBU report :link
Additional information
Sample information
strainNA
tissueheart
dev stageNA
sexNA
ageNA
cell typemesenchymal precursor cell
cell lineNA
companyNA
collaborationClaudio Schneider LNCIB
External link for information[{{{sample_info_link}}} {{{sample_info_link}}}]
RNA information
lot numberNA
catalog numberNA
sample typeNA
extraction protocol (Details)NA

CAGE Accession numbers
MethodSample accession id
CAGE  SAMD00005645
Library accession numbers

Library idMethodExp. accession idRun accession id
CNhs12370 CAGE DRX008553 DRR009425
Accession ID Hg19

Library idBAMCTSS
CNhs12370 DRZ000850 DRZ002235
Accession ID Hg38

Library idBAMCTSS
CNhs12370 DRZ012200 DRZ013585
Download raw sequence, BAM & CTSS
Hg19
FastaBAMCTSS
downloaddownloaddonwload
Hg38
BAMCTSS
downloaddonwload


Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.



Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data

Coexpression clusterscore
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis0
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma0.148
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal0
C113-thyroid-throat-lung-lymph-small-colon-trachea0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD190
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils0
C120-immature-salivary-tongue-skin-cervical-CD14-CD340
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD40
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair0.0627
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral0
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid0
C156-plasma-splenic-hereditary-B-large-xeroderma-b0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD40
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural0
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD19-0.173
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle-0.0762
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage0
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma0
C190-colon-small-rectum-duodenum-appendix-temporal-oral0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD40
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD140.0627
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes0.433
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed-0.167
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall0
C202-salivary-skin-penis-tongue-uterus-cervical-immature0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD340
C205-mycosis-cord-hairy-xeroderma-CD4-B-b0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD340
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD340
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD190
C220-Adipocyte-mature-left-breast-skin-liver-adipose0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte-0.157
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte0.118
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD140
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF70
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus0.0419
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory0
C247-pons-locus-medulla-spinal-paracentral-medial-occipital0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD40.0627
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma0
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD80
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD40.118
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth0
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD40
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small0.0685
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus0.118
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial0.0627
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal0.457
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal0.561
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature0
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal0.502
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD340
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral0
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte0.798
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood0
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic0.38
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD1330
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural0
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H90
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic0.614
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD80
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal0.523
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD340
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD340
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid0



Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data



TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs12370

Jaspar motifP-value
MA0002.20.0652
MA0003.10.913
MA0004.10.285
MA0006.10.872
MA0007.10.771
MA0009.10.318
MA0014.10.281
MA0017.10.104
MA0018.20.0553
MA0019.10.725
MA0024.10.242
MA0025.10.109
MA0027.10.897
MA0028.10.0948
MA0029.10.712
MA0030.10.16
MA0031.10.0191
MA0035.20.0215
MA0038.10.95
MA0039.20.00909
MA0040.10.793
MA0041.10.575
MA0042.10.849
MA0043.10.269
MA0046.10.18
MA0047.20.871
MA0048.10.0375
MA0050.10.00166
MA0051.10.0648
MA0052.10.0534
MA0055.10.0597
MA0057.10.642
MA0058.10.478
MA0059.10.525
MA0060.10.0165
MA0061.10.516
MA0062.20.267
MA0065.20.0149
MA0066.10.828
MA0067.10.644
MA0068.10.522
MA0069.10.173
MA0070.10.566
MA0071.10.71
MA0072.10.37
MA0073.10.598
MA0074.10.123
MA0076.10.199
MA0077.10.403
MA0078.10.331
MA0079.20.353
MA0080.23.83363e-7
MA0081.10.0516
MA0083.10.0339
MA0084.10.0572
MA0087.10.66
MA0088.10.311
MA0090.10.00983
MA0091.10.38
MA0092.10.416
MA0093.10.602
MA0099.22.45678e-8
MA0100.10.529
MA0101.10.849
MA0102.20.606
MA0103.13.9314e-6
MA0104.20.452
MA0105.10.108
MA0106.10.235
MA0107.10.785
MA0108.20.141
MA0111.10.257
MA0112.20.176
MA0113.10.582
MA0114.10.0423
MA0115.10.294
MA0116.10.107
MA0117.10.829
MA0119.10.493
MA0122.10.467
MA0124.10.119
MA0125.10.135
MA0131.10.788
MA0135.10.151
MA0136.12.69581e-5
MA0137.20.238
MA0138.20.48
MA0139.10.979
MA0140.10.316
MA0141.10.779
MA0142.10.178
MA0143.10.687
MA0144.10.246
MA0145.10.68
MA0146.10.266
MA0147.10.724
MA0148.10.985
MA0149.10.738
MA0150.10.173
MA0152.13.05152e-4
MA0153.10.497
MA0154.10.286
MA0155.10.962
MA0156.10.00581
MA0157.10.107
MA0159.10.4
MA0160.10.159
MA0162.10.135
MA0163.10.00595
MA0164.10.75
MA0258.10.638
MA0259.10.588



FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs12370

Novel motifP-value
10.958
100.364
1000.285
1010.314
1020.216
1030.377
1040.654
1050.0468
1060.891
1070.704
1080.662
1090.807
110.602
1100.0591
1110.0998
1120.77
1130.00349
1140.884
1150.224
1160.0277
1170.37
1180.309
1190.596
120.388
1200.245
1210.812
1220.014
1231.01839e-4
1240.153
1250.87
1260.996
1270.628
1280.953
1290.91
130.927
1300.236
1310.348
1320.696
1330.864
1340.419
1350.214
1360.693
1370.59
1380.733
1390.573
140.195
1400.24
1410.581
1420.376
1430.458
1440.49
1450.994
1460.92
1470.16
1480.663
1490.346
150.802
1500.104
1510.411
1520.349
1530.998
1540.459
1550.00844
1560.307
1570.597
1580.005
1590.138
160.0672
1600.936
1610.393
1620.994
1630.75
1640.368
1650.189
1660.249
1670.83
1680.751
1690.093
170.922
180.249
190.0526
20.481
200.459
210.432
220.489
230.412
240.616
250.176
260.334
270.945
280.339
290.443
30.658
300.449
310.988
322.05675e-10
330.752
340.442
350.864
360.0982
370.243
380.524
390.125
40.209
400.12
410.572
420.843
430.824
440.458
450.745
460.712
470.606
480.832
490.073
50.888
500.481
510.969
520.489
530.0161
540.891
550.447
560.412
570.489
580.2
590.348
60.199
600.721
610.837
620.822
630.914
640.679
650.539
660.515
670.488
680.869
690.259
70.404
700.371
710.469
720.542
730.076
740.0926
750.671
760.716
770.012
780.0455
790.0115
80.35
800.988
810.962
820.567
830.943
840.725
850.793
860.168
870.0574
880.428
890.111
90.524
900.651
910.824
920.509
930.841
940.442
950.323
960.938
970.297
980.0522
990.0669



de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br> library id: CNhs12370


FANTOM5 (FF) ontology

Direct parent terms


Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000723 (somatic stem cell)
0000048 (multi fate stem cell)
0000548 (animal cell)
0002320 (connective tissue cell)
0002371 (somatic cell)
0000219 (motile cell)
0000134 (mesenchymal cell)
0000255 (eukaryotic cell)
0002494 (cardiocyte)
0000034 (stem cell)
0000569 (cardiac mesenchymal cell)

UBERON: Anatomy
0000468 (multi-cellular organism)
0007100 (primary circulatory organ)
0000948 (heart)
0002384 (connective tissue)
0000479 (tissue)
0010314 (structure with developmental contribution from neural crest)
0000062 (organ)
0004120 (mesoderm-derived structure)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0003103 (compound organ)
0010317 (germ layer / neural crest derived structure)
0004535 (cardiovascular system)
0001009 (circulatory system)

FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)
0000271 (human cardiac mesenchymal precursor cell sample)

Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
CL:0000133 (neurectodermal cell)
CL:0000134 (mesenchymal cell)
CL:0000011 (migratory trunk neural crest cell)
CL:0000221 (ectodermal cell)

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