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{{f5samples
{{f5samples
|id=FF:10200-103F2
|DRA_sample_Accession=CAGE@SAMD00005578
|name=penis, adult
|accession_numbers=CAGE;DRX008705;DRR009577;DRZ001002;DRZ002387;DRZ012352;DRZ013737
|sample_id=10200
|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0007023,UBERON:0000989,UBERON:0000479,UBERON:0005156,UBERON:0000062,UBERON:0004120,UBERON:0000061,UBERON:0000465,UBERON:0000990,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0003135,UBERON:0008811,UBERON:0003133,UBERON:0010317,UBERON:0003101,UBERON:0000079
|rna_tube_id=103F2
|rna_box=103
|rna_position=F2
|sample_cell_lot=NA
|sample_cell_catalog=NA
|sample_company=Biochain
|rna_lot_number=
|rna_catalog_number=R1234194-50
|sample_species=Human (Homo sapiens)
|sample_strain=
|sample_dev_stage=
|sample_tissue=
|sample_donor(cell lot)=
|sample_sex=29
|sample_age=M
|sample_ethnicity=
|rna_rin=
|rna_od260/230=
|rna_od260/280=
|sample_cell_type=CELL MIXTURE - tissue sample
|sample_cell_line=
|sample_collaboration=
|sample_experimental_condition=
|sample_disease=
|rna_sample_type=
|rna_extraction_protocol=
|rna_weight_ug=50
|rna_concentration=2.47
|sample_note=
|profile_hcage=CNhs12850,LSID973,release012,COMPLETED
|profile_cagescan=,,,
|profile_srnaseq=,,,
|profile_rnaseq=,,,
|ancestors_in_cell_lineage_facet=
|ancestors_in_cell_lineage_facet=
|ancestors_in_anatomy_facet=UBERON:0000061,UBERON:0000062,UBERON:0000079,UBERON:0000465,UBERON:0000467,UBERON:0000468,UBERON:0000479,UBERON:0000480,UBERON:0000481,UBERON:0000922,UBERON:0000923,UBERON:0000926,UBERON:0000989,UBERON:0000990,UBERON:0001062,UBERON:0002050,UBERON:0002532,UBERON:0003064,UBERON:0003081,UBERON:0003101,UBERON:0003104,UBERON:0003133,UBERON:0003135,UBERON:0004120,UBERON:0004874,UBERON:0004876,UBERON:0005156,UBERON:0005291,UBERON:0005423,UBERON:0005876,UBERON:0006258,UBERON:0007023,UBERON:0008811,UBERON:0009142
|ancestors_in_disease_facet=
|ancestors_in_disease_facet=
|sample_description=
|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000101,FF:0000001,FF:0000998,FF:0000004,FF:0010200
|comment=
|created_by=
|creation_date=
|data_phase=2
|datafreeze_phase=2
|def=
|expression_enrichment_score=chr12:52437488..52437507,+!p2@NR4A1!2.18!150.35!NR4A1;;chr20:62680984..62680999,-!p1@SOX18!1.92!107.18!SOX18;;chr11:34642612..34642646,+!p1@EHF!1.85!70.46!EHF;;chr15:42749722..42749739,-!p2@ZFP106!1.83!115.62!ZFP106;;chr19:46801639..46801699,+!p1@HIF3A!1.71!50.61!HIF3A;;chr21:39870339..39870443,-!p1@ERG!1.70!48.63!ERG;;chr11:113930425..113930471,+!p1@ZBTB16!1.60!55.58!ZBTB16;;chr1:40105299..40105326,-!p1@HEYL!1.57!36.22!HEYL;;chr1:170632285..170632309,+!p1@PRRX1!1.51!35.73!PRRX1;;chr8:10588010..10588030,-!p1@SOX7!1.50!30.77!SOX7;;chr5:158526917..158526932,-!p1@EBF1!1.47!69.97!EBF1;;chr16:86544113..86544145,+!p1@FOXF1!1.45!33.74!FOXF1;;chrY:21906594..21906622,-!p1@KDM5D!1.45!27.29!KDM5D;;chr4:57547454..57547469,-!p1@HOPX!1.44!26.80!HOPX;;chr1:170633348..170633399,+!p2@PRRX1!1.42!34.24!PRRX1;;chr1:151804244..151804310,-!p1@RORC!1.39!23.82!RORC;;chr2:19558373..19558392,-!p1@OSR1!1.38!62.03!OSR1;;chr1:170633058..170633084,+!p5@PRRX1!1.36!21.83!PRRX1;;chr12:81101404..81101421,+!p1@MYF6!1.36!21.83!MYF6;;chr17:80797886..80797906,-!p1@ZNF750!1.36!21.83!ZNF750;;chr20:50179368..50179392,-!p2@NFATC2!1.34!26.80!NFATC2;;chr17:53342311..53342400,+!p1@HLF!1.34!23.82!HLF;;chr1:201979743..201979762,+!p1@ELF3!1.34!20.84!ELF3;;chr1:203055129..203055147,-!p1@MYOG!1.34!20.84!MYOG;;chr7:15726296..15726315,-!p1@MEOX2!1.34!20.84!MEOX2;;chr22:38380543..38380569,-!p1@SOX10!1.31!19.35!SOX10;;chr1:170633262..170633285,+!p3@PRRX1!1.30!21.83!PRRX1;;chr3:21792682..21792720,-!p1@ZNF385D!1.30!18.86!ZNF385D;;chr12:52445218..52445237,+!p1@NR4A1!1.29!226.27!NR4A1;;chr11:129245526..129245553,+!p1@BARX2!1.28!17.86!BARX2;;chr5:71803177..71803255,-!p1@ZNF366!1.28!17.86!ZNF366;;chr6:34524093..34524135,-!p1@SPDEF!1.28!17.86!SPDEF;;chr19:16435625..16435682,+!p1@KLF2!1.27!552.28!KLF2;;chr14:61116183..61116208,-!p1@SIX1!1.27!66.00!SIX1;;chr6:126070769..126070801,+!p1@HEY2!1.27!20.34!HEY2;;chr5:50679228..50679288,+!p1@ISL1!1.26!17.37!ISL1;;chr2:145277882..145277967,-!p3@ZEB2!1.25!28.78!ZEB2;;chr3:169381420..169381535,-!p1@MECOM!1.25!19.85!MECOM;;chr22:19748231..19748317,+!p1@TBX1!1.25!16.87!TBX1;;chr22:41763452..41763466,+!p2@TEF!1.25!16.87!TEF;;chr7:15726243..15726293,-!p2@MEOX2!1.25!16.87!MEOX2;;chr7:73038839..73038862,-!p1@MLXIPL!1.25!16.87!MLXIPL;;chr8:55370487..55370503,+!p1@SOX17!1.25!16.87!SOX17;;chr1:201979703..201979721,+!p2@ELF3!1.25!16.87!ELF3;;chr6:1312325..1312340,+!p1@FOXQ1!1.24!26.80!FOXQ1;;chr11:113930401..113930422,+!p3@ZBTB16!1.24!16.37!ZBTB16;;chr1:61548374..61548415,+!p4@NFIA!1.23!29.28!NFIA;;chr3:12330560..12330579,+!p1@PPARG!1.23!18.36!PPARG;;chr16:54320617..54320643,-!p3@IRX3!1.21!19.35!IRX3;;chr2:45236540..45236577,-!p1@SIX2!1.21!15.38!SIX2;;chr3:189507432..189507459,+!p1@TP63!1.21!15.38!TP63;;chr8:25902876..25902936,-!p1@EBF2!1.21!15.38!EBF2;;chr6:1389789..1389821,+!p1@FOXF2!1.20!20.34!FOXF2;;chr6:134210243..134210257,+!p1@TCF21!1.20!14.89!TCF21;;chr12:54410664..54410684,+!p1@HOXC4,p1@HOXC5,p1@HOXC6!1.20!14.89!HOXC5;;chr12:81101472..81101483,+!p2@MYF6!1.20!14.89!MYF6;;chr15:96873984..96873999,+!p3@NR2F2!1.19!105.69!NR2F2;;chr6:19837592..19837621,+!p1@ID4!1.19!86.84!ID4;;chr7:27192185..27192209,-!p1@HOXA3!1.19!14.39!HOXA3;;chr16:85932760..85932775,+!p1@IRF8!1.19!14.39!IRF8;;chr16:86600426..86600441,+!p1@FOXC2!1.16!33.25!FOXC2;;chr6:152126830..152126847,+!p4@ESR1!1.16!13.40!ESR1;;chr2:223163706..223163730,-!p1@PAX3!1.14!12.90!PAX3;;chr7:44143925..44143970,+!p1@AEBP1!1.13!274.40!AEBP1;;chr11:113930291..113930339,+!p2@ZBTB16!1.13!20.34!ZBTB16;;chr7:77469439..77469459,+!p6@PHTF2!1.13!12.41!PHTF2;;chr17:6926362..6926377,+!p1@BCL6B!1.13!12.41!BCL6B;;chr5:88178983..88179012,-!p1@MEF2C!1.12!93.29!MEF2C;;chr12:26277956..26277980,-!p1@BHLHE41!1.12!43.67!BHLHE41;;chr6:10412600..10412637,-!p1@TFAP2A!1.12!20.34!TFAP2A;;chr16:79634624..79634642,-!p1@MAF!1.11!47.14!MAF;;chr12:96588368..96588394,+!p3@ELK3!1.11!31.76!ELK3;;chr15:96869255..96869291,+!p6@NR2F2!1.11!21.83!NR2F2;;chr10:8096631..8096660,+!p1@GATA3!1.11!14.39!GATA3;;chr2:176969228..176969260,+!p1@HOXD11!1.11!11.91!HOXD11;;chr19:33793430..33793447,-!p1@CEBPA!1.09!48.13!CEBPA;;chr15:101069113..101069169,-!p1@CERS3!1.09!11.41!CERS3;;chr17:59529743..59529798,+!p1@TBX4!1.09!11.41!TBX4;;chr7:27205136..27205164,-!p1@HOXA9!1.09!11.41!HOXA9;;chr9:1050331..1050363,+!p1@DMRT2!1.09!11.41!DMRT2;;chr17:7493405..7493419,-!p1@SOX15!1.08!10.92!SOX15;;chr15:61521417..61521460,-!p2@RORA!1.07!24.31!RORA;;chr16:79634595..79634620,-!p2@MAF!1.07!19.85!MAF;;chr3:21792585..21792625,-!p2@ZNF385D!1.07!11.91!ZNF385D;;chr3:189349162..189349207,+!p2@TP63!1.06!10.42!TP63;;chr11:125034640..125034655,+!p1@PKNOX2!1.06!10.42!PKNOX2;;chr7:96654133..96654150,-!p1@DLX5!1.06!10.42!DLX5;;chr20:39317868..39317884,-!p1@MAFB!1.04!118.59!MAFB;;chr9:114287433..114287513,+!p1@ZNF483!1.04!26.30!ZNF483;;chr16:79633894..79633954,-!p3@MAF!1.04!19.35!MAF;;chr5:158526459..158526481,-!p2@EBF1!1.04!13.40!EBF1;;chr3:126076242..126076257,-!p1@KLF15!1.04!12.41!KLF15;;chr2:122042770..122042785,-!p1@TFCP2L1!1.04!9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|fantom_cat=http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0000079;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0000990;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0003133;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0003135;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0004122;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0004876
|ffid_belonging_in_development=UBERON:0002532,UBERON:0006603,UBERON:0004874,UBERON:0010316
|fonse_cell_line=
|fonse_cell_line=
|fonse_cell_line_closure=
|fonse_cell_line_closure=
Line 66: Line 41:
|fonse_treatment=
|fonse_treatment=
|fonse_treatment_closure=
|fonse_treatment_closure=
|top_motifs=
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|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.tissue.hCAGE/penis%252c%2520adult.CNhs12850.10200-103F2.hg19.nobarcode.bam
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.tissue.hCAGE/penis%252c%2520adult.CNhs12850.10200-103F2.hg19.ctss.bed.gz
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.tissue.hCAGE/penis%252c%2520adult.CNhs12850.10200-103F2.hg19.nobarcode.rdna.fa.gz
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.tissue.hCAGE/penis%252c%2520adult.CNhs12850.10200-103F2.hg38.nobarcode.bam
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.tissue.hCAGE/penis%252c%2520adult.CNhs12850.10200-103F2.hg38.nobarcode.ctss.bed.gz
|id=FF:10200-103F2
|is_a=EFO:0002091;;FF:0010200
|is_obsolete=
|library_id=CNhs12850
|library_id_phase_based=2:CNhs12850
|microRNAs=
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|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;10200
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;10200
|name=penis, adult
|namespace=FANTOM5
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|profile_hcage=CNhs12850,LSID973,release012,COMPLETED
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|refex=http://refex.dbcls.jp/genelist.php?lang
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|rna_box=103
|rna_catalog_number=R1234194-50
|rna_concentration=2.47
|rna_extraction_protocol=
|rna_lot_number=
|rna_od260/230=
|rna_od260/280=
|rna_position=F2
|rna_rin=
|rna_sample_type=
|rna_tube_id=103F2
|rna_weight_ug=50
|sample_age=29
|sample_category=tissues
|sample_cell_catalog=NA
|sample_cell_line=
|sample_cell_lot=NA
|sample_cell_type=CELL MIXTURE - tissue sample
|sample_collaboration=
|sample_company=Biochain
|sample_description=
|sample_dev_stage=
|sample_disease=
|sample_donor(cell lot)=
|sample_ethnicity=
|sample_experimental_condition=
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;1.19913578296531e-222!GO:0005737;cytoplasm;3.5253428970359e-182!GO:0043226;organelle;1.27858677818764e-135!GO:0043229;intracellular organelle;2.4115552367938e-135!GO:0044444;cytoplasmic part;1.34645995179782e-114!GO:0043227;membrane-bound organelle;9.74723450644842e-109!GO:0043231;intracellular membrane-bound organelle;9.74723450644842e-109!GO:0005515;protein binding;5.54786148121938e-105!GO:0044422;organelle part;7.85077336787204e-82!GO:0044446;intracellular organelle part;1.26684464419464e-80!GO:0032991;macromolecular complex;2.55345116601663e-68!GO:0030529;ribonucleoprotein complex;8.86328323827549e-51!GO:0005739;mitochondrion;4.19065480445459e-49!GO:0044238;primary metabolic process;7.18555680440994e-47!GO:0044237;cellular metabolic process;2.63399082453296e-46!GO:0043170;macromolecule metabolic process;1.83928454854296e-43!GO:0003723;RNA binding;2.38379613354274e-42!GO:0043233;organelle lumen;5.8088533836247e-41!GO:0031974;membrane-enclosed lumen;5.8088533836247e-41!GO:0016043;cellular component organization and biogenesis;2.45243420123838e-40!GO:0043234;protein complex;5.1134374069195e-37!GO:0019538;protein metabolic process;7.9460518981083e-36!GO:0044429;mitochondrial part;8.38933756443889e-36!GO:0005634;nucleus;6.35792556306334e-35!GO:0044428;nuclear part;7.05519955438622e-35!GO:0031090;organelle membrane;3.88961471871547e-33!GO:0005840;ribosome;2.17438203010564e-32!GO:0033036;macromolecule localization;3.90653843797419e-32!GO:0031967;organelle envelope;1.70163890703445e-31!GO:0031975;envelope;2.70961122160775e-31!GO:0044260;cellular macromolecule metabolic process;3.71786087879577e-31!GO:0015031;protein transport;7.53441726819122e-31!GO:0005829;cytosol;9.03461698367047e-31!GO:0008104;protein localization;6.98826741825287e-30!GO:0045184;establishment of protein localization;1.50903142900862e-29!GO:0044267;cellular protein metabolic process;1.95368944495234e-29!GO:0006412;translation;2.23376323199848e-29!GO:0043228;non-membrane-bound organelle;2.8653705886397e-29!GO:0043232;intracellular non-membrane-bound organelle;2.8653705886397e-29!GO:0003735;structural constituent of ribosome;6.0946198642938e-28!GO:0016071;mRNA metabolic process;1.21977548428769e-26!GO:0046907;intracellular transport;1.37632479854944e-25!GO:0008092;cytoskeletal protein binding;3.31778472130097e-25!GO:0006396;RNA processing;3.39886147926529e-25!GO:0008380;RNA splicing;5.54975067122169e-25!GO:0033279;ribosomal subunit;2.50745284584294e-24!GO:0005740;mitochondrial envelope;2.50745284584294e-24!GO:0031966;mitochondrial membrane;5.65789765459562e-24!GO:0019866;organelle inner membrane;1.14037188963624e-22!GO:0006886;intracellular protein transport;1.28262783079325e-22!GO:0006397;mRNA processing;2.82420292361781e-22!GO:0044249;cellular biosynthetic process;4.88625845330347e-22!GO:0005743;mitochondrial inner membrane;1.43284855432134e-21!GO:0010467;gene expression;1.55383198514028e-21!GO:0031981;nuclear lumen;2.03769357877578e-21!GO:0065003;macromolecular complex assembly;2.05397420962276e-21!GO:0022607;cellular component assembly;2.29793395515624e-21!GO:0043283;biopolymer metabolic process;1.17606758807791e-20!GO:0009059;macromolecule biosynthetic process;1.3853244820103e-20!GO:0009058;biosynthetic process;2.19566005989175e-20!GO:0006119;oxidative phosphorylation;2.19566005989175e-20!GO:0008134;transcription factor binding;1.23206007969552e-18!GO:0048770;pigment granule;2.69916212953357e-18!GO:0042470;melanosome;2.69916212953357e-18!GO:0044455;mitochondrial membrane part;3.60686134561153e-18!GO:0005746;mitochondrial respiratory chain;3.82679131398028e-18!GO:0005830;cytosolic ribosome (sensu Eukaryota);4.86569167012405e-18!GO:0005681;spliceosome;5.83404677259876e-17!GO:0003779;actin binding;1.20562097011712e-16!GO:0044445;cytosolic part;2.06604002639428e-16!GO:0051641;cellular localization;2.7576757530063e-16!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;2.84549656708208e-16!GO:0015629;actin cytoskeleton;3.56781512631169e-16!GO:0051649;establishment of cellular localization;4.29489866673424e-16!GO:0006996;organelle organization and biogenesis;4.50766677838072e-16!GO:0050136;NADH dehydrogenase (quinone) activity;6.03049072340319e-16!GO:0003954;NADH dehydrogenase activity;6.03049072340319e-16!GO:0008137;NADH dehydrogenase (ubiquinone) activity;6.03049072340319e-16!GO:0022613;ribonucleoprotein complex biogenesis and assembly;1.20993106635932e-15!GO:0016192;vesicle-mediated transport;2.31398216800594e-14!GO:0005783;endoplasmic reticulum;2.58935565557142e-14!GO:0005654;nucleoplasm;6.25392462338858e-14!GO:0031980;mitochondrial lumen;8.50086506544005e-14!GO:0005759;mitochondrial matrix;8.50086506544005e-14!GO:0030964;NADH dehydrogenase complex (quinone);8.66245975242201e-14!GO:0045271;respiratory chain complex I;8.66245975242201e-14!GO:0005747;mitochondrial respiratory chain complex I;8.66245975242201e-14!GO:0015935;small ribosomal subunit;1.50637511189872e-13!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;1.51536360417583e-13!GO:0008135;translation factor activity, nucleic acid binding;1.53767225013433e-13!GO:0022618;protein-RNA complex assembly;2.10846146524675e-13!GO:0042775;organelle ATP synthesis coupled electron transport;2.15922801988501e-13!GO:0042773;ATP synthesis coupled electron transport;2.15922801988501e-13!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;2.6900541010034e-13!GO:0048523;negative regulation of cellular process;5.90618680962319e-13!GO:0044451;nucleoplasm part;6.92732872874445e-13!GO:0000166;nucleotide binding;8.32275543258331e-13!GO:0006512;ubiquitin cycle;1.04852808797048e-12!GO:0044449;contractile fiber part;1.14174473492741e-12!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;1.18010310540403e-12!GO:0030036;actin cytoskeleton organization and biogenesis;1.61363083490309e-12!GO:0051603;proteolysis involved in cellular protein catabolic process;2.25185856975779e-12!GO:0006605;protein targeting;2.26272233950557e-12!GO:0043292;contractile fiber;3.97272318271962e-12!GO:0019941;modification-dependent protein catabolic process;4.55333816897153e-12!GO:0043632;modification-dependent macromolecule catabolic process;4.55333816897153e-12!GO:0006511;ubiquitin-dependent protein catabolic process;4.73181823374108e-12!GO:0030029;actin filament-based process;5.31499968934889e-12!GO:0048193;Golgi vesicle transport;6.3680475282945e-12!GO:0015934;large ribosomal subunit;7.02403502824163e-12!GO:0003712;transcription cofactor activity;7.06830779961563e-12!GO:0005794;Golgi apparatus;7.06830779961563e-12!GO:0044257;cellular protein catabolic process;7.6824166194464e-12!GO:0044265;cellular macromolecule catabolic process;1.00370190012314e-11!GO:0048519;negative regulation of biological process;1.16398642898601e-11!GO:0012505;endomembrane system;2.3215469734756e-11!GO:0008307;structural constituent of muscle;3.94049313019695e-11!GO:0006366;transcription from RNA polymerase II promoter;4.48030934301226e-11!GO:0000502;proteasome complex (sensu Eukaryota);5.14821719111765e-11!GO:0043687;post-translational protein modification;5.84715772081968e-11!GO:0005856;cytoskeleton;1.12355840643148e-10!GO:0030016;myofibril;1.12785117985877e-10!GO:0043412;biopolymer modification;1.56203317015746e-10!GO:0016874;ligase activity;2.04019820388046e-10!GO:0006457;protein folding;2.16243118950303e-10!GO:0007517;muscle development;2.20998696714526e-10!GO:0016564;transcription repressor activity;3.09706931508074e-10!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;3.28241216248915e-10!GO:0044248;cellular catabolic process;3.28871323499663e-10!GO:0006461;protein complex assembly;3.37502506938059e-10!GO:0017111;nucleoside-triphosphatase activity;3.41870658219532e-10!GO:0016817;hydrolase activity, acting on acid anhydrides;3.69560884318403e-10!GO:0016462;pyrophosphatase activity;3.75606932840454e-10!GO:0005761;mitochondrial ribosome;4.97146301404703e-10!GO:0000313;organellar ribosome;4.97146301404703e-10!GO:0050789;regulation of biological process;6.67640189435144e-10!GO:0006464;protein modification process;8.7263856712867e-10!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);8.83010212153519e-10!GO:0003743;translation initiation factor activity;9.39066234351755e-10!GO:0009055;electron carrier activity;1.23178642718955e-09!GO:0015980;energy derivation by oxidation of organic compounds;1.45376177916208e-09!GO:0008565;protein transporter activity;1.59698438894467e-09!GO:0030017;sarcomere;1.8954741975335e-09!GO:0006913;nucleocytoplasmic transport;3.64299265288051e-09!GO:0050794;regulation of cellular process;3.89024975544012e-09!GO:0016070;RNA metabolic process;4.84094647029629e-09!GO:0043285;biopolymer catabolic process;5.22052819809656e-09!GO:0006446;regulation of translational initiation;5.58408147878267e-09!GO:0044432;endoplasmic reticulum part;5.92747140977321e-09!GO:0045333;cellular respiration;6.32934084428078e-09!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);7.05955749192008e-09!GO:0006413;translational initiation;7.16300806112246e-09!GO:0051169;nuclear transport;8.58501742224571e-09!GO:0012501;programmed cell death;8.69676928468128e-09!GO:0051186;cofactor metabolic process;1.00690202162202e-08!GO:0030163;protein catabolic process;1.10272317488195e-08!GO:0006915;apoptosis;1.58760408521781e-08!GO:0032553;ribonucleotide binding;1.73393059595637e-08!GO:0032555;purine ribonucleotide binding;1.73393059595637e-08!GO:0017076;purine nucleotide binding;1.797356095223e-08!GO:0009060;aerobic respiration;2.08544259367499e-08!GO:0009057;macromolecule catabolic process;2.28587618645575e-08!GO:0016604;nuclear body;3.06209933862225e-08!GO:0017038;protein import;3.09273556304528e-08!GO:0006793;phosphorus metabolic process;4.39986956049629e-08!GO:0006796;phosphate metabolic process;4.39986956049629e-08!GO:0008219;cell death;4.49865989961113e-08!GO:0016265;death;4.49865989961113e-08!GO:0000398;nuclear mRNA splicing, via spliceosome;4.70976565785227e-08!GO:0000375;RNA splicing, via transesterification reactions;4.70976565785227e-08!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;4.70976565785227e-08!GO:0019829;cation-transporting ATPase activity;4.81277160006381e-08!GO:0005730;nucleolus;5.07386458246653e-08!GO:0005635;nuclear envelope;5.83827501634976e-08!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;7.08824303433586e-08!GO:0008639;small protein conjugating enzyme activity;8.15278203012134e-08!GO:0031252;leading edge;1.02067761868709e-07!GO:0031988;membrane-bound vesicle;1.04753458809779e-07!GO:0004842;ubiquitin-protein ligase activity;1.17201711420606e-07!GO:0031982;vesicle;1.18060124338948e-07!GO:0006091;generation of precursor metabolites and energy;1.20979028228172e-07!GO:0031965;nuclear membrane;1.21818457929069e-07!GO:0051082;unfolded protein binding;1.2466327596199e-07!GO:0016607;nuclear speck;1.38711164147806e-07!GO:0015078;hydrogen ion transmembrane transporter activity;1.67276283584468e-07!GO:0019899;enzyme binding;1.76287056329865e-07!GO:0016529;sarcoplasmic reticulum;1.87229997731626e-07!GO:0016528;sarcoplasm;1.87229997731626e-07!GO:0016023;cytoplasmic membrane-bound vesicle;1.90410557720588e-07!GO:0031410;cytoplasmic vesicle;2.16394667992312e-07!GO:0003714;transcription corepressor activity;2.76903794377014e-07!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;3.23493581991524e-07!GO:0019787;small conjugating protein ligase activity;3.46007627688011e-07!GO:0006099;tricarboxylic acid cycle;3.9385655865899e-07!GO:0046356;acetyl-CoA catabolic process;3.9385655865899e-07!GO:0007010;cytoskeleton organization and biogenesis;4.07333922770944e-07!GO:0016310;phosphorylation;4.30487715967494e-07!GO:0003676;nucleic acid binding;4.30680506862283e-07!GO:0005793;ER-Golgi intermediate compartment;4.65036038018555e-07!GO:0009892;negative regulation of metabolic process;4.73844270531321e-07!GO:0031324;negative regulation of cellular metabolic process;7.35028020664714e-07!GO:0006732;coenzyme metabolic process;7.81110796266512e-07!GO:0006357;regulation of transcription from RNA polymerase II promoter;8.40290676548251e-07!GO:0006606;protein import into nucleus;9.06415688360122e-07!GO:0016469;proton-transporting two-sector ATPase complex;9.26234531180397e-07!GO:0006084;acetyl-CoA metabolic process;9.55335424509613e-07!GO:0005912;adherens junction;9.5723296887592e-07!GO:0007264;small GTPase mediated signal transduction;1.78558854217647e-06!GO:0051170;nuclear import;1.81123542320359e-06!GO:0016481;negative regulation of transcription;1.81123542320359e-06!GO:0008361;regulation of cell size;1.83203883131085e-06!GO:0015986;ATP synthesis coupled proton transport;1.91152170618872e-06!GO:0015985;energy coupled proton transport, down electrochemical gradient;1.91152170618872e-06!GO:0065007;biological regulation;1.9918824393613e-06!GO:0016049;cell growth;2.12687586893175e-06!GO:0009109;coenzyme catabolic process;2.18474348103649e-06!GO:0051246;regulation of protein metabolic process;2.21204634175624e-06!GO:0003713;transcription coactivator activity;2.91675116566926e-06!GO:0045259;proton-transporting ATP synthase complex;3.18348126001904e-06!GO:0014706;striated muscle development;3.25072208840154e-06!GO:0003924;GTPase activity;3.31777694274481e-06!GO:0006163;purine nucleotide metabolic process;4.1109034094828e-06!GO:0009150;purine ribonucleotide metabolic process;4.77133431559833e-06!GO:0031674;I band;5.3807759246499e-06!GO:0015077;monovalent inorganic cation transmembrane transporter activity;5.84785150573588e-06!GO:0016879;ligase activity, forming carbon-nitrogen bonds;7.19334971603854e-06!GO:0003012;muscle system process;7.22383238306256e-06!GO:0006936;muscle contraction;7.22383238306256e-06!GO:0046034;ATP metabolic process;7.40444229606518e-06!GO:0051128;regulation of cellular component organization and biogenesis;7.43038596109377e-06!GO:0030120;vesicle coat;8.51529952013115e-06!GO:0030662;coated vesicle membrane;8.51529952013115e-06!GO:0051187;cofactor catabolic process;8.57383055217174e-06!GO:0042802;identical protein binding;8.98824061772465e-06!GO:0005788;endoplasmic reticulum lumen;1.02495422340003e-05!GO:0009259;ribonucleotide metabolic process;1.03249451350978e-05!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;1.13770414308146e-05!GO:0016881;acid-amino acid ligase activity;1.26141125164747e-05!GO:0006888;ER to Golgi vesicle-mediated transport;1.34561271515779e-05!GO:0042175;nuclear envelope-endoplasmic reticulum network;1.41947589405009e-05!GO:0001558;regulation of cell growth;1.41947589405009e-05!GO:0016044;membrane organization and biogenesis;1.52604778898978e-05!GO:0005789;endoplasmic reticulum membrane;1.53020628601339e-05!GO:0007265;Ras protein signal transduction;1.53120774846706e-05!GO:0009056;catabolic process;1.59236647097723e-05!GO:0009205;purine ribonucleoside triphosphate metabolic process;1.60543665842742e-05!GO:0009144;purine nucleoside triphosphate metabolic process;1.60543665842742e-05!GO:0016563;transcription activator activity;1.62495846820977e-05!GO:0009199;ribonucleoside triphosphate metabolic process;1.64335727287647e-05!GO:0031589;cell-substrate adhesion;1.64752202698303e-05!GO:0032559;adenyl ribonucleotide binding;1.73209609795636e-05!GO:0048475;coated membrane;1.79657245334665e-05!GO:0030117;membrane coat;1.79657245334665e-05!GO:0030554;adenyl nucleotide binding;1.97580742342914e-05!GO:0005524;ATP binding;2.22114261449674e-05!GO:0005768;endosome;2.42476853606233e-05!GO:0009141;nucleoside triphosphate metabolic process;2.47422271654081e-05!GO:0016887;ATPase activity;2.75386779661301e-05!GO:0006916;anti-apoptosis;2.96260441783305e-05!GO:0007519;skeletal muscle development;3.28062406620669e-05!GO:0005525;GTP binding;3.54315162928074e-05!GO:0042623;ATPase activity, coupled;4.27477854615095e-05!GO:0007160;cell-matrix adhesion;4.49862941453884e-05!GO:0005839;proteasome core complex (sensu Eukaryota);4.63271599366596e-05!GO:0005798;Golgi-associated vesicle;4.67748100882624e-05!GO:0006754;ATP biosynthetic process;4.6861641298786e-05!GO:0006753;nucleoside phosphate metabolic process;4.6861641298786e-05!GO:0051789;response to protein stimulus;5.54015862943593e-05!GO:0006986;response to unfolded protein;5.54015862943593e-05!GO:0006164;purine nucleotide biosynthetic process;5.57587360227315e-05!GO:0005523;tropomyosin binding;5.60692043403955e-05!GO:0016491;oxidoreductase activity;6.04450992764151e-05!GO:0009152;purine ribonucleotide biosynthetic process;6.74392429946533e-05!GO:0030018;Z disc;6.82341524348491e-05!GO:0045892;negative regulation of transcription, DNA-dependent;7.41657595628119e-05!GO:0016197;endosome transport;7.7882293987362e-05!GO:0007266;Rho protein signal transduction;8.67535253366443e-05!GO:0042981;regulation of apoptosis;8.86135747136121e-05!GO:0030532;small nuclear ribonucleoprotein complex;9.29105438159044e-05!GO:0043069;negative regulation of programmed cell death;9.5892141128768e-05!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;0.00011170340538738!GO:0009145;purine nucleoside triphosphate biosynthetic process;0.00011170340538738!GO:0000245;spliceosome assembly;0.000114212789838397!GO:0009142;nucleoside triphosphate biosynthetic process;0.000114212789838397!GO:0009201;ribonucleoside triphosphate biosynthetic process;0.000114212789838397!GO:0043067;regulation of programmed cell death;0.000114212789838397!GO:0005924;cell-substrate adherens junction;0.0001175701977291!GO:0005741;mitochondrial outer membrane;0.000126456100891279!GO:0005770;late endosome;0.000127211952527044!GO:0044453;nuclear membrane part;0.000127211952527044!GO:0043066;negative regulation of apoptosis;0.000127211952527044!GO:0009966;regulation of signal transduction;0.000133852336238724!GO:0043566;structure-specific DNA binding;0.000144345688613021!GO:0051427;hormone receptor binding;0.000145562296806908!GO:0030055;cell-matrix junction;0.000146208042856393!GO:0048471;perinuclear region of cytoplasm;0.000152016443744972!GO:0009260;ribonucleotide biosynthetic process;0.000152016443744972!GO:0032561;guanyl ribonucleotide binding;0.000159299269897693!GO:0019001;guanyl nucleotide binding;0.000159299269897693!GO:0031202;RNA splicing factor activity, transesterification mechanism;0.000162920821584578!GO:0045786;negative regulation of progression through cell cycle;0.000186869480829163!GO:0000151;ubiquitin ligase complex;0.000206756792482614!GO:0033673;negative regulation of kinase activity;0.000207782627602793!GO:0006469;negative regulation of protein kinase activity;0.000207782627602793!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;0.000216733273835417!GO:0019867;outer membrane;0.000235570946944641!GO:0004298;threonine endopeptidase activity;0.000246228275477893!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;0.000246228275477893!GO:0006259;DNA metabolic process;0.000246844371609846!GO:0005791;rough endoplasmic reticulum;0.000249300271627824!GO:0040008;regulation of growth;0.000271013939862499!GO:0006613;cotranslational protein targeting to membrane;0.000281478105011919!GO:0035257;nuclear hormone receptor binding;0.000287166988573302!GO:0031968;organelle outer membrane;0.000287248140247859!GO:0044431;Golgi apparatus part;0.000290026723714169!GO:0048522;positive regulation of cellular process;0.000294922090099446!GO:0001726;ruffle;0.000338245898925424!GO:0022890;inorganic cation transmembrane transporter activity;0.000339169191033193!GO:0031032;actomyosin structure organization and biogenesis;0.00035593396082388!GO:0005083;small GTPase regulator activity;0.000359597556916496!GO:0030133;transport vesicle;0.000368143598641463!GO:0005773;vacuole;0.00038390906481406!GO:0051287;NAD binding;0.000430029435810027!GO:0019843;rRNA binding;0.000434949410540453!GO:0005762;mitochondrial large ribosomal subunit;0.000448468667834892!GO:0000315;organellar large ribosomal subunit;0.000448468667834892!GO:0006979;response to oxidative stress;0.000458919348819937!GO:0006941;striated muscle contraction;0.000486939235057949!GO:0003724;RNA helicase activity;0.000517509648735269!GO:0045893;positive regulation of transcription, DNA-dependent;0.000523794216503133!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.000553695175313433!GO:0030027;lamellipodium;0.000591680089244402!GO:0042254;ribosome biogenesis and assembly;0.00062881145333969!GO:0045445;myoblast differentiation;0.000647696617500123!GO:0006897;endocytosis;0.000669014832428013!GO:0010324;membrane invagination;0.000669014832428013!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;0.000674372606298551!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;0.000679327233521872!GO:0005643;nuclear pore;0.000693955680864032!GO:0051348;negative regulation of transferase activity;0.000698647154640563!GO:0008286;insulin receptor signaling pathway;0.000702384587965128!GO:0032446;protein modification by small protein conjugation;0.000708084031082726!GO:0044420;extracellular matrix part;0.000719319060295504!GO:0007243;protein kinase cascade;0.000723081199177208!GO:0043284;biopolymer biosynthetic process;0.000773316201492617!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;0.000781226664800435!GO:0004812;aminoacyl-tRNA ligase activity;0.000781226664800435!GO:0016875;ligase activity, forming carbon-oxygen bonds;0.000781226664800435!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.000787773858978425!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000787773858978425!GO:0005667;transcription factor complex;0.000795657200919602!GO:0016567;protein ubiquitination;0.000847994379197093!GO:0006414;translational elongation;0.000849056550816834!GO:0000323;lytic vacuole;0.000924723766044529!GO:0005764;lysosome;0.000924723766044529!GO:0007005;mitochondrion organization and biogenesis;0.000972759307030379!GO:0005865;striated muscle thin filament;0.00102482302764124!GO:0005925;focal adhesion;0.00102922606445163!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00105260770280624!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00105260770280624!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00105260770280624!GO:0004386;helicase activity;0.00106679018128742!GO:0045941;positive regulation of transcription;0.00114991822910123!GO:0008154;actin polymerization and/or depolymerization;0.0011734969950313!GO:0065002;intracellular protein transport across a membrane;0.00118211011109269!GO:0051188;cofactor biosynthetic process;0.00128164672164532!GO:0050657;nucleic acid transport;0.00131997150680478!GO:0051236;establishment of RNA localization;0.00131997150680478!GO:0050658;RNA transport;0.00131997150680478!GO:0008026;ATP-dependent helicase activity;0.00134274288159968!GO:0003746;translation elongation factor activity;0.0013679826016528!GO:0030695;GTPase regulator activity;0.00138644531847184!GO:0009117;nucleotide metabolic process;0.00141087744570582!GO:0006325;establishment and/or maintenance of chromatin architecture;0.00141509822983122!GO:0005905;coated pit;0.00143863268832654!GO:0048518;positive regulation of biological process;0.00144068934585159!GO:0044440;endosomal part;0.00145208807662715!GO:0010008;endosome membrane;0.00145208807662715!GO:0003702;RNA polymerase II transcription factor activity;0.00146086705336749!GO:0006403;RNA localization;0.00147568935368706!GO:0043038;amino acid activation;0.00151942741601952!GO:0006418;tRNA aminoacylation for protein translation;0.00151942741601952!GO:0043039;tRNA aminoacylation;0.00151942741601952!GO:0000314;organellar small ribosomal subunit;0.0016626536414931!GO:0005763;mitochondrial small ribosomal subunit;0.0016626536414931!GO:0016568;chromatin modification;0.0016626536414931!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.00166553170641145!GO:0015002;heme-copper terminal oxidase activity;0.00166553170641145!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.00166553170641145!GO:0004129;cytochrome-c oxidase activity;0.00166553170641145!GO:0035258;steroid hormone receptor binding;0.00175623868010814!GO:0030518;steroid hormone receptor signaling pathway;0.00196093076903638!GO:0003697;single-stranded DNA binding;0.00197770122803312!GO:0030867;rough endoplasmic reticulum membrane;0.00200911280571874!GO:0043021;ribonucleoprotein binding;0.00201815512221762!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;0.00206874254495195!GO:0045935;positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.00206874254495195!GO:0046314;phosphocreatine biosynthetic process;0.00212291453145614!GO:0006603;phosphocreatine metabolic process;0.00212291453145614!GO:0043623;cellular protein complex assembly;0.00216421270530842!GO:0001725;stress fiber;0.00232487816206069!GO:0032432;actin filament bundle;0.00232487816206069!GO:0030132;clathrin coat of coated pit;0.00246260788032774!GO:0051493;regulation of cytoskeleton organization and biogenesis;0.00266024989303379!GO:0033043;regulation of organelle organization and biogenesis;0.00266024989303379!GO:0033017;sarcoplasmic reticulum membrane;0.00266044319905353!GO:0048041;focal adhesion formation;0.00280692096977498!GO:0006402;mRNA catabolic process;0.00301005071902876!GO:0005977;glycogen metabolic process;0.00319223124038183!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;0.0033033394031945!GO:0015399;primary active transmembrane transporter activity;0.0033033394031945!GO:0045792;negative regulation of cell size;0.00344176224583702!GO:0006323;DNA packaging;0.00344241353810633!GO:0044262;cellular carbohydrate metabolic process;0.00344241353810633!GO:0048741;skeletal muscle fiber development;0.00345492902744797!GO:0048747;muscle fiber development;0.00345492902744797!GO:0006892;post-Golgi vesicle-mediated transport;0.00356272063196918!GO:0001568;blood vessel development;0.00372398933226169!GO:0006891;intra-Golgi vesicle-mediated transport;0.0037315545646418!GO:0005885;Arp2/3 protein complex;0.00377964367223051!GO:0030308;negative regulation of cell growth;0.00379980119530987!GO:0005769;early endosome;0.00380636032434679!GO:0001944;vasculature development;0.00387602017053788!GO:0006635;fatty acid beta-oxidation;0.00399383450255817!GO:0005913;cell-cell adherens junction;0.00401891044250007!GO:0007249;I-kappaB kinase/NF-kappaB cascade;0.00409811444574557!GO:0005048;signal sequence binding;0.00423904339582603!GO:0015992;proton transport;0.00423904339582603!GO:0051920;peroxiredoxin activity;0.00445722766251405!GO:0009108;coenzyme biosynthetic process;0.00458615916777262!GO:0006818;hydrogen transport;0.00459376221073437!GO:0017166;vinculin binding;0.00461273897815814!GO:0008186;RNA-dependent ATPase activity;0.0046965824447499!GO:0030041;actin filament polymerization;0.00473218837327307!GO:0006612;protein targeting to membrane;0.00477725402450266!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;0.00485972856506579!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;0.0049548016577418!GO:0042692;muscle cell differentiation;0.00512211965062033!GO:0055001;muscle cell development;0.0051861322338022!GO:0030239;myofibril assembly;0.0051861322338022!GO:0055002;striated muscle cell development;0.0051861322338022!GO:0030031;cell projection biogenesis;0.00532915555731155!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.00548218818259377!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.00548218818259377!GO:0000902;cell morphogenesis;0.00548719439630316!GO:0032989;cellular structure morphogenesis;0.00548719439630316!GO:0005852;eukaryotic translation initiation factor 3 complex;0.00552990663889888!GO:0045098;type III intermediate filament;0.00559324970159905!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.00566733442964152!GO:0005100;Rho GTPase activator activity;0.0059320582833762!GO:0016859;cis-trans isomerase activity;0.00593475329796262!GO:0003690;double-stranded DNA binding;0.00607140266882079!GO:0001666;response to hypoxia;0.00618799614776314!GO:0019904;protein domain specific binding;0.00684610061538265!GO:0007242;intracellular signaling cascade;0.0068690065527211!GO:0016772;transferase activity, transferring phosphorus-containing groups;0.00716234355993741!GO:0016791;phosphoric monoester hydrolase activity;0.00759474461785642!GO:0043488;regulation of mRNA stability;0.00764307121511789!GO:0043487;regulation of RNA stability;0.00764307121511789!GO:0046983;protein dimerization activity;0.00764307121511789!GO:0043492;ATPase activity, coupled to movement of substances;0.00775221058104016!GO:0005862;muscle thin filament tropomyosin;0.00778318391637068!GO:0032535;regulation of cellular component size;0.00797793637924611!GO:0030118;clathrin coat;0.00798319331465744!GO:0017015;regulation of transforming growth factor beta receptor signaling pathway;0.00814888522611771!GO:0007179;transforming growth factor beta receptor signaling pathway;0.00819107502131221!GO:0030832;regulation of actin filament length;0.00826011595493223!GO:0051539;4 iron, 4 sulfur cluster binding;0.00830054838560182!GO:0006073;glucan metabolic process;0.00832944768944765!GO:0051252;regulation of RNA metabolic process;0.00839628133424532!GO:0045045;secretory pathway;0.00847249446257638!GO:0042805;actinin binding;0.00860885745534349!GO:0051028;mRNA transport;0.0086363393161461!GO:0032956;regulation of actin cytoskeleton organization and biogenesis;0.00878006584509681!GO:0051087;chaperone binding;0.00887940151639536!GO:0008139;nuclear localization sequence binding;0.00887940151639536!GO:0008654;phospholipid biosynthetic process;0.00893226082618724!GO:0008250;oligosaccharyl transferase complex;0.00901760313835666!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.00915515118188344!GO:0019222;regulation of metabolic process;0.00917489458430625!GO:0006752;group transfer coenzyme metabolic process;0.00917489458430625!GO:0006607;NLS-bearing substrate import into nucleus;0.0093696667138444!GO:0005581;collagen;0.00947203011096349!GO:0000122;negative regulation of transcription from RNA polymerase II promoter;0.00963643300587388!GO:0019902;phosphatase binding;0.0100403078744506!GO:0008047;enzyme activator activity;0.0104319638071615!GO:0005096;GTPase activator activity;0.0104762739048559!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.0105133844554324!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.0105133844554324!GO:0000139;Golgi membrane;0.010545230135607!GO:0006950;response to stress;0.0107144501923302!GO:0019208;phosphatase regulator activity;0.0107451701987564!GO:0048468;cell development;0.0109894376135024!GO:0003729;mRNA binding;0.0109894376135024!GO:0030658;transport vesicle membrane;0.011164845693921!GO:0005516;calmodulin binding;0.011237265519608!GO:0051540;metal cluster binding;0.0113534716739445!GO:0051536;iron-sulfur cluster binding;0.0113534716739445!GO:0001525;angiogenesis;0.0114316139467477!GO:0004004;ATP-dependent RNA helicase activity;0.0114768287862873!GO:0048514;blood vessel morphogenesis;0.0114890399430423!GO:0033116;ER-Golgi intermediate compartment membrane;0.0114908838049419!GO:0043034;costamere;0.0116324496777731!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.0119415644642547!GO:0030663;COPI coated vesicle membrane;0.0120499085626058!GO:0030126;COPI vesicle coat;0.0120499085626058!GO:0030521;androgen receptor signaling pathway;0.0122277117599517!GO:0030522;intracellular receptor-mediated signaling pathway;0.0125864570975391!GO:0031143;pseudopodium;0.0126287961158805!GO:0005869;dynactin complex;0.0129663588063405!GO:0006693;prostaglandin metabolic process;0.0130804488683388!GO:0006692;prostanoid metabolic process;0.0130804488683388!GO:0006364;rRNA processing;0.0139158380515309!GO:0046930;pore complex;0.0139958431508153!GO:0016584;nucleosome positioning;0.0143512139664805!GO:0031902;late endosome membrane;0.0144728008265943!GO:0043681;protein import into mitochondrion;0.0148283568629594!GO:0008064;regulation of actin polymerization and/or depolymerization;0.0148736538671702!GO:0004576;oligosaccharyl transferase activity;0.0149494917948394!GO:0005790;smooth endoplasmic reticulum;0.0153107950051548!GO:0007167;enzyme linked receptor protein signaling pathway;0.0153667967282012!GO:0016072;rRNA metabolic process;0.0159150238858618!GO:0016853;isomerase activity;0.0159916303918529!GO:0000074;regulation of progression through cell cycle;0.0159995018700653!GO:0035035;histone acetyltransferase binding;0.0163315943649489!GO:0008601;protein phosphatase type 2A regulator activity;0.0163315943649489!GO:0045926;negative regulation of growth;0.0165323505081977!GO:0005665;DNA-directed RNA polymerase II, core complex;0.0167285250002194!GO:0050811;GABA receptor binding;0.0172104367775589!GO:0051726;regulation of cell cycle;0.0173348982897407!GO:0051049;regulation of transport;0.0173986411773003!GO:0030100;regulation of endocytosis;0.0174001823131375!GO:0045454;cell redox homeostasis;0.0176215760059078!GO:0051270;regulation of cell motility;0.0181314440523768!GO:0048500;signal recognition particle;0.0187638357202433!GO:0008287;protein serine/threonine phosphatase complex;0.0190097215124699!GO:0016281;eukaryotic translation initiation factor 4F complex;0.0196544721391464!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.0198800460510621!GO:0031072;heat shock protein binding;0.019959171704066!GO:0048487;beta-tubulin binding;0.0200025671934477!GO:0015631;tubulin binding;0.0205980614411045!GO:0004721;phosphoprotein phosphatase activity;0.0206098657079082!GO:0048660;regulation of smooth muscle cell proliferation;0.0206414375326451!GO:0017022;myosin binding;0.0210089209591409!GO:0005813;centrosome;0.0210555128333771!GO:0030674;protein binding, bridging;0.0214944809431102!GO:0012506;vesicle membrane;0.0217706380304782!GO:0030134;ER to Golgi transport vesicle;0.0229757101087263!GO:0016627;oxidoreductase activity, acting on the CH-CH group of donors;0.0245544066988579!GO:0004674;protein serine/threonine kinase activity;0.0249357350123065!GO:0016765;transferase activity, transferring alkyl or aryl (other than methyl) groups;0.025998235513306!GO:0032940;secretion by cell;0.025998235513306!GO:0019838;growth factor binding;0.0261185846281978!GO:0005604;basement membrane;0.026173055955223!GO:0019395;fatty acid oxidation;0.026680027373738!GO:0006633;fatty acid biosynthetic process;0.0267290316572908!GO:0051129;negative regulation of cellular component organization and biogenesis;0.0267362559288905!GO:0030127;COPII vesicle coat;0.0276290165198059!GO:0012507;ER to Golgi transport vesicle membrane;0.0276290165198059!GO:0006006;glucose metabolic process;0.0283992342959067!GO:0005159;insulin-like growth factor receptor binding;0.0286221191096833!GO:0051146;striated muscle cell differentiation;0.0286488990841751!GO:0006376;mRNA splice site selection;0.0288646086992477!GO:0000389;nuclear mRNA 3'-splice site recognition;0.0288646086992477!GO:0048154;S100 beta binding;0.02919411540034!GO:0006401;RNA catabolic process;0.0293514895703797!GO:0030660;Golgi-associated vesicle membrane;0.0294210761707501!GO:0030137;COPI-coated vesicle;0.0296353805950933!GO:0033018;sarcoplasmic reticulum lumen;0.0303590345805105!GO:0051168;nuclear export;0.0305091019226704!GO:0000159;protein phosphatase type 2A complex;0.0305711452371329!GO:0050681;androgen receptor binding;0.0307103968676213!GO:0019888;protein phosphatase regulator activity;0.031248423637346!GO:0008147;structural constituent of bone;0.031248423637346!GO:0030659;cytoplasmic vesicle membrane;0.031248423637346!GO:0009719;response to endogenous stimulus;0.0313341442014843!GO:0030140;trans-Golgi network transport vesicle;0.0320874886040811!GO:0051393;alpha-actinin binding;0.0325278661026705!GO:0004111;creatine kinase activity;0.0325645491602354!GO:0005938;cell cortex;0.0331146911011542!GO:0005099;Ras GTPase activator activity;0.0334135437888301!GO:0001516;prostaglandin biosynthetic process;0.0339125604831171!GO:0046457;prostanoid biosynthetic process;0.0339125604831171!GO:0030241;muscle thick filament assembly;0.0339125604831171!GO:0031034;myosin filament assembly;0.0339125604831171!GO:0031033;myosin filament assembly or disassembly;0.0339125604831171!GO:0048739;cardiac muscle fiber development;0.0339125604831171!GO:0043086;negative regulation of catalytic activity;0.0339415562990065!GO:0014866;skeletal myofibril assembly;0.0342431669200853!GO:0050662;coenzyme binding;0.0353150356948923!GO:0043407;negative regulation of MAP kinase activity;0.0359960520041495!GO:0006399;tRNA metabolic process;0.0363998761387491!GO:0045947;negative regulation of translational initiation;0.0365443660295925!GO:0035023;regulation of Rho protein signal transduction;0.0374653564544335!GO:0051289;protein homotetramerization;0.0375856448976502!GO:0000060;protein import into nucleus, translocation;0.0380978385324916!GO:0046578;regulation of Ras protein signal transduction;0.0387384669273152!GO:0006112;energy reserve metabolic process;0.0387751625805184!GO:0016620;oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor;0.0388816152905683!GO:0048659;smooth muscle cell proliferation;0.0395583843911341!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.0396083969713054!GO:0045047;protein targeting to ER;0.0396083969713054!GO:0006650;glycerophospholipid metabolic process;0.0399164907650029!GO:0031349;positive regulation of defense response;0.0399164907650029!GO:0050729;positive regulation of inflammatory response;0.0399164907650029!GO:0000059;protein import into nucleus, docking;0.0405368175646053!GO:0005518;collagen binding;0.0406846701995122!GO:0060090;molecular adaptor activity;0.0421424221440979!GO:0005815;microtubule organizing center;0.043479035103452!GO:0030235;nitric-oxide synthase regulator activity;0.0435553060079378!GO:0005200;structural constituent of cytoskeleton;0.0435928314028909!GO:0006631;fatty acid metabolic process;0.0439828863511334!GO:0032981;mitochondrial respiratory chain complex I assembly;0.0441340869063775!GO:0010257;NADH dehydrogenase complex assembly;0.0441340869063775!GO:0033108;mitochondrial respiratory chain complex assembly;0.0441340869063775!GO:0043022;ribosome binding;0.0452520306325398!GO:0051101;regulation of DNA binding;0.0458875471000184!GO:0009967;positive regulation of signal transduction;0.0465279799830064!GO:0005884;actin filament;0.046686200554822!GO:0005853;eukaryotic translation elongation factor 1 complex;0.0466890241154796!GO:0030198;extracellular matrix organization and biogenesis;0.0466890241154796!GO:0031901;early endosome membrane;0.0466890241154796!GO:0006118;electron transport;0.0471268014302645!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.0471385027458166!GO:0019752;carboxylic acid metabolic process;0.0474834906437401!GO:0019903;protein phosphatase binding;0.0480552816284603!GO:0051260;protein homooligomerization;0.0483296613442525!GO:0015630;microtubule cytoskeleton;0.0483296613442525!GO:0006595;polyamine metabolic process;0.0487167752295328!GO:0048662;negative regulation of smooth muscle cell proliferation;0.0495961216164322!GO:0030125;clathrin vesicle coat;0.0497776909940369!GO:0030665;clathrin coated vesicle membrane;0.0497776909940369
|sample_id=10200
|sample_note=
|sample_sex=M
|sample_species=Human (Homo sapiens)
|sample_strain=
|sample_tissue=
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|xref=
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:10200-103F2;search_select_hide=table117:FF:10200-103F2
}}
}}

Latest revision as of 13:55, 3 June 2020

Name:penis, adult
Species:Human (Homo sapiens)
Library ID:CNhs12850
Sample type:tissues
Genomic View: UCSC
RefEX:Specific genes
FANTOM CAT:1, 2, 3, 4, 5, 6
CAGEd-oPOSSUM:link
ZENBU report :link
Additional information
Sample information
strainNA
tissueNA
dev stageNA
sexM
age29
cell typeCELL MIXTURE - tissue sample
cell lineNA
companyBiochain
collaborationNA
External link for information[{{{sample_info_link}}} {{{sample_info_link}}}]
RNA information
lot numberNA
catalog numberR1234194-50
sample typeNA
extraction protocol (Details)NA

CAGE Accession numbers
MethodSample accession id
CAGE  SAMD00005578
Library accession numbers

Library idMethodExp. accession idRun accession id
CNhs12850 CAGE DRX008705 DRR009577
Accession ID Hg19

Library idBAMCTSS
CNhs12850 DRZ001002 DRZ002387
Accession ID Hg38

Library idBAMCTSS
CNhs12850 DRZ012352 DRZ013737
Download raw sequence, BAM & CTSS
Hg19
FastaBAMCTSS
downloaddownloaddonwload
Hg38
BAMCTSS
downloaddonwload


Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.



Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data

Coexpression clusterscore
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis0.549
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma-0.308
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal0
C113-thyroid-throat-lung-lymph-small-colon-trachea0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD190
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils0
C120-immature-salivary-tongue-skin-cervical-CD14-CD340
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD40
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis0.175
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen0.407
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair0
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral0
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid0
C156-plasma-splenic-hereditary-B-large-xeroderma-b0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD40
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes0.175
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose0.175
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural0.0588
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD190.199
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle0.691
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage0.299
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma0
C190-colon-small-rectum-duodenum-appendix-temporal-oral0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD40
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD140
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival0.175
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes0.418
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat0.396
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed0.89
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall0
C202-salivary-skin-penis-tongue-uterus-cervical-immature0.454
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD340
C205-mycosis-cord-hairy-xeroderma-CD4-B-b0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte0.175
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD340
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD340
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary0.348
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD190
C220-Adipocyte-mature-left-breast-skin-liver-adipose0.175
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte0.87
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal0.175
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue0.299
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart0.175
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD140
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung0.299
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF70
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus-0.516
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory0.254
C247-pons-locus-medulla-spinal-paracentral-medial-occipital0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD40.354
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma0.717
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD80
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD40
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth-0.0304
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast0.131
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD40
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small-0.577
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus0.516
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial0.542
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal0.175
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal0.396
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature0
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal0.299
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD340
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral0.215
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte0.119
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood0
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic0
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus1.143
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea0.81
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD1330
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus0.824
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural0.175
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H90
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic0.299
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left0.299
C73-pineal-eye-retina-caudate-cerebellum-left-parietal0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD80
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal0.175
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD340
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD340
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left0.651
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid0



Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data



TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs12850

Jaspar motifP-value
MA0002.20.00207
MA0003.10.191
MA0004.10.00111
MA0006.10.237
MA0007.10.731
MA0009.10.471
MA0014.10.18
MA0017.10.72
MA0018.27.08182e-4
MA0019.10.327
MA0024.10.00365
MA0025.10.0767
MA0027.10.682
MA0028.14.65241e-12
MA0029.10.395
MA0030.10.942
MA0031.10.996
MA0035.20.0164
MA0038.19.3689e-4
MA0039.20.00412
MA0040.10.162
MA0041.10.616
MA0042.10.721
MA0043.14.25891e-6
MA0046.10.00242
MA0047.20.952
MA0048.10.0205
MA0050.10.119
MA0051.10.0583
MA0052.15.62318e-15
MA0055.11.06225e-4
MA0057.10.484
MA0058.15.92645e-5
MA0059.12.19757e-4
MA0060.12.76527e-12
MA0061.16.62717e-6
MA0062.21.45269e-19
MA0065.20.723
MA0066.10.317
MA0067.10.00663
MA0068.10.999
MA0069.10.31
MA0070.10.162
MA0071.10.94
MA0072.10.238
MA0073.10.758
MA0074.10.467
MA0076.11.18672e-13
MA0077.10.144
MA0078.10.462
MA0079.20.997
MA0080.29.90333e-7
MA0081.10.00738
MA0083.11.2164e-4
MA0084.10.931
MA0087.10.85
MA0088.10.0502
MA0090.10.293
MA0091.10.243
MA0092.10.222
MA0093.14.57695e-4
MA0099.21.41045e-22
MA0100.10.00278
MA0101.15.95194e-7
MA0102.20.00171
MA0103.10.391
MA0104.24.76039e-6
MA0105.10.0029
MA0106.10.196
MA0107.11.06253e-7
MA0108.21.31603e-8
MA0111.10.991
MA0112.20.0149
MA0113.10.0422
MA0114.10.256
MA0115.10.987
MA0116.10.156
MA0117.10.15
MA0119.10.138
MA0122.10.397
MA0124.10.799
MA0125.10.774
MA0131.10.0459
MA0135.10.618
MA0136.13.40988e-11
MA0137.20.108
MA0138.20.0387
MA0139.10.0784
MA0140.10.00115
MA0141.10.877
MA0142.10.0609
MA0143.10.449
MA0144.10.32
MA0145.10.0842
MA0146.10.164
MA0147.13.82194e-6
MA0148.10.962
MA0149.10.0866
MA0150.13.57868e-6
MA0152.10.382
MA0153.10.848
MA0154.10.788
MA0155.10.179
MA0156.18.5815e-15
MA0157.10.675
MA0159.10.774
MA0160.10.541
MA0162.10.176
MA0163.10.0908
MA0164.10.665
MA0258.10.0479
MA0259.10.0042



FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs12850

Novel motifP-value
10.648
100.282
1000.31
1010.513
1020.513
1030.494
1040.681
1050.459
1060.156
1070.0154
1080.0811
1090.0521
110.527
1100.697
1110.848
1120.135
1130.702
1140.862
1150.00609
1160.0279
1170.0648
1180.0219
1190.0782
120.475
1200.241
1210.546
1220.228
1230.631
1240.194
1250.862
1260.494
1270.798
1280.023
1290.94
130.28
1300.398
1310.416
1320.0107
1330.00402
1340.221
1350.0575
1360.0594
1370.729
1380.42
1390.0953
140.745
1400.665
1410.78
1420.597
1430.17
1440.686
1450.868
1460.557
1470.014
1480.739
1490.212
150.133
1500.904
1510.607
1520.576
1530.24
1540.892
1550.6
1560.755
1570.55
1580.512
1590.182
160.593
1600.537
1610.434
1620.635
1630.279
1640.566
1650.0636
1660.0801
1670.339
1680.817
1690.0982
170.919
180.449
190.00899
20.00312
200.0212
210.444
220.57
230.146
240.185
250.628
260.399
270.792
280.469
290.0751
30.753
300.046
310.416
320.079
330.234
340.317
350.871
360.0205
370.969
380.898
390.186
40.364
400.0269
410.134
420.335
430.735
440.0154
450.142
460.9
470.384
480.371
490.774
50.709
500.595
510.489
520.0911
530.888
540.782
550.946
560.892
570.802
580.963
590.233
60.509
600.287
610.375
620.747
630.388
640.48
650.323
662.60753e-4
670.986
680.242
690.305
70.578
700.793
710.429
720.638
730.263
740.493
750.143
760.0893
770.0168
780.81
790.0447
80.799
800.305
810.294
820.14
830.78
840.879
850.0241
860.596
870.0141
880.762
890.0455
90.829
900.445
910.0573
920.202
930.285
940.132
950.00303
960.681
970.675
980.365
990.0285



de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br> library id: CNhs12850


FANTOM5 (FF) ontology

Direct parent terms


Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data

UBERON: Anatomy
0000468 (multi-cellular organism)
0007023 (adult organism)
0000989 (penis)
0000479 (tissue)
0005156 (reproductive structure)
0000062 (organ)
0004120 (mesoderm-derived structure)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000990 (reproductive system)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0003135 (male reproductive organ)
0008811 (intromittent organ)
0003133 (reproductive organ)
0010317 (germ layer / neural crest derived structure)
0003101 (male organism)
0000079 (male reproductive system)

FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000101 (sample by species)
0000001 (sample)
0000998 (adult tissue sample)
0000004 (tissue sample)
0010200 (human penis - adult sample)

Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
UBERON:0002532 (epiblast (generic))
UBERON:0006603 (presumptive mesoderm)
UBERON:0004874 (somatopleure)
UBERON:0010316 (germ layer / neural crest)

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