FFCP PHASE1:Hg19::chr10:43633962..43633969,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr10:43633962..43633969,+ to FFCP PHASE1:Hg19::chr10:43633962..43633969,+: NSchange) |
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(10 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=55454 | |EntrezGene=55454 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24292 | |HGNC=24292 | ||
|TSSclassifier=strong | |||
|UniProt=Q8N6G5 | |UniProt=Q8N6G5 | ||
|association_with_transcript=28bp_to_ENST00000374464,ENST00000374466,NM_018590,uc001jam.1,uc001jan.2_5end | |||
|cluster_id=chr10:43633962..43633969,+ | |||
|coexpression_cluster_id=C3017 | |||
|description=CAGE_peak_5_at_CSGALNACT2_5end | |||
|id=chr10:43633962..43633969,+ | |||
|ontology_enrichment_celltype=CL:0000766!2.54e-32!76;CL:0000839!8.41e-30!70;CL:0000738!1.99e-29!140;CL:0000557!4.08e-29!71;CL:0002057!7.99e-29!42;CL:0002009!1.25e-28!65;CL:0002194!1.35e-27!63;CL:0000576!1.35e-27!63;CL:0000040!1.35e-27!63;CL:0000559!1.35e-27!63;CL:0000860!1.41e-26!45;CL:0002031!3.66e-26!124;CL:0002087!2.59e-24!119;CL:0000037!7.48e-20!172;CL:0000566!7.48e-20!172;CL:0000988!5.22e-19!182;CL:0002032!1.78e-17!165;CL:0000837!1.78e-17!165;CL:0000763!3.45e-17!112;CL:0000049!3.45e-17!112;CL:0002320!4.06e-14!365;CL:0000134!5.87e-14!358;CL:0000048!1.80e-13!430;CL:0000723!2.53e-13!436;CL:0000034!8.93e-13!444;CL:0000219!2.85e-11!390;CL:0002393!3.18e-07!9;CL:0002397!3.18e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.30e-50;33!CL:0002057;3.30e-50;33!CL:0000473;1.25e-43;39!CL:0000234;1.25e-43;39!CL:0000576;1.36e-40;48!CL:0000766;5.34e-33;69!CL:0002087;1.30e-15;104!CL:0000738;2.73e-14;136!CL:0000763;2.67e-13;100!CL:0002393;1.22e-10;6!CL:0002397;1.22e-10;6!CL:0000094;7.16e-10;8!CL:0000988;4.03e-09;177!CL:0000081;9.64e-09;11!CL:0000219;3.45e-07;193!CL:0000840;4.13e-07;5!CL:0000451;6.23e-07;10!CL:0000875;9.03e-07;3!CL:0002396;9.03e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,3.10e-79,72;CL:0000473,5.23e-72,48;CL:0000234,5.23e-72,48;CL:0000557,4.85e-71,67;CL:0002009,5.25e-71,61;CL:0000860,1.70e-70,42;CL:0002057,1.70e-70,42;CL:0000839,1.50e-69,66;CL:0002194,2.23e-68,59;CL:0000576,2.23e-68,59;CL:0000040,2.23e-68,59;CL:0000559,2.23e-68,59;CL:0000738,4.18e-66,136;CL:0002031,1.86e-54,120;CL:0002087,1.63e-52,115;CL:0000763,1.11e-51,108;CL:0000049,1.11e-51,108;CL:0000037,2.08e-50,168;CL:0000988,5.47e-48,177;CL:0002032,1.55e-45,161;CL:0000837,1.55e-45,161;CL:0000134,3.05e-21,354;CL:0002320,2.43e-20,361;CL:0000219,3.50e-17,386;CL:0000048,3.98e-17,427;CL:0000723,1.58e-16,433;CL:0000034,1.87e-16,441;CL:0002393,8.47e-16,9;CL:0002397,8.47e-16,9;CL:0000094,4.46e-10,8;CL:0000081,8.18e-09,11;CL:0000840,5.03e-07,5;CL:0001029,5.03e-07,5;CL:0000451,6.87e-07,10;CL:0000875,8.26e-07,3;CL:0002396,8.26e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;4.50e-50;42!CL:0000049;1.73e-14;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.37e-33!102;UBERON:0003061!2.37e-33!102;UBERON:0002193!2.68e-29!112;UBERON:0001474!1.08e-28!86;UBERON:0002371!1.93e-28!80;UBERON:0004765!2.78e-24!101;UBERON:0001434!2.78e-24!101;UBERON:0002405!1.34e-17!115;UBERON:0002204!5.48e-17!167;UBERON:0002384!5.26e-13!375;UBERON:0003081!1.08e-11!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.71e-65,76;UBERON:0001474,1.56e-63,82;UBERON:0002390,4.56e-63,98;UBERON:0003061,4.56e-63,98;UBERON:0004765,3.12e-56,90;UBERON:0002193,2.34e-55,108;UBERON:0002405,4.77e-50,93;UBERON:0001434,9.49e-49,100;UBERON:0002204,2.70e-28,167;UBERON:0003081,6.64e-26,203;UBERON:0002384,6.75e-20,371;UBERON:0000926,5.52e-12,315;UBERON:0004120,5.52e-12,315;UBERON:0006603,5.52e-12,315 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0.422863212287913,0,0.446961094427288,0,0,0.631719873426831,0.261185628199839,0.491467873003018,0,0.218441372130172,0,0.123766352960047,0,0,0.602694528023977,0,0,0.123121058076788,0,0,0,0.136874425072884,0.251085279189606,0.0764134057479513,0,0.0787107813136792,1.57345710739562,3.45446458287491,2.94150634300544,0,0.30120591877825,0.739508020333575,0.0774672005803016,0.142169232487422,0.293600439334847,3.32397245119126,2.20598892217156,2.38711957787437,0.447830948479849,1.94336199611388,1.54545340580512,2.76256653681173,4.1566353805769,3.39617685662943,2.32429036905685,3.28934310417461,4.33588919253145,5.46615545412086,2.81776777182011,3.07426898855161,2.41321976515633,4.51839278508678,4.06279459783025,2.82363509313907,3.0019676506363,2.02251136000576,2.44867113896722,5.45579346029359,4.47535988059329,4.28806690242731,4.78712778291916,4.26224750532694,3.77272010217159,3.97169657283798,2.4912889959823,3.26623264833766,5.73631210262222,2.6062661364614,1.21079900526674,3.68277635987565,1.58231193720442,2.11255286311942,3.82687739937078,1.67726916406701,1.68492946719743,1.65194582125657,3.2145117339416,5.98526761856622,2.58591680358817,4.20127553658658,0,0,0,0,0,0,0.661044872784862,0.954053754535364,0.569212969109448,1.17447437874188,0.382273228125229,0,2.24203425192614,0,1.37696839079683,1.57204305099666,1.23360899399706,1.67186495390678,0.32592226663359,0.473447805734733,3.89653456815823,1.22551502573691,1.76763544484902,1.32920336750173,1.35401931882508,1.0247305578054,1.04047478047903,0.493313713811028,0.829050053357545,1.73881851441031,1.92772532110679,0.802622484269139,0,1.13309342697566,0.766440987203842,1.37450978193052,1.26509846009751,0.318565414324097,0.651083453856419,0.950452044448374,1.50575119077773,1.02389288923535,0,0.947109008176067,0,2.82249440514625,1.60464117470104,1.88271725047639,0,0,0.383587685530591,0.361439152384566,0.50133791063589,0,0.795285947051099,1.45990461090791,0.189069634328136,0.665188192387692,0.175669571386252,0.196468613246569,0,0,3.24547393654683,2.26368658489047,0.930705723632056,2.14641561874808,2.85997455390064,2.22874500797739,0,0,0,0,0,0,0,0.258416759169329,0.35576626268671,0.33472061276467,0,0,0,0.735326160691737,0,0.17859945656816,0,0,0,0,0.183201743930407,1.31780417436063,3.87780264148325,0,0,0.379891534993739,0.794455084879313,0.860509862246441,0.354668382198357,0,0,0,0.311211035399766,0.404132016209064,0.163461903113459,0.302714855289863,0,0.234321431833797,0,0.570471821544449,0.448346041655403,0,0.323745888736263,0,0.204154171254893,0.122834317311768,0.516628905878827,0,0,0,0,0,0.125118519871964,0.831192346452549,0.877955241761676,0,0,0.567160915800105,0.538168907066586,0.213557388818567,0.635795703478686,0.600182192168805,0.618315175430633,0.257640540045629,0.37223371266318,0.337552664482532,0.876933046450788,0,0,0.646584227275248,0.355009592516614,0.403008392910561,0,0.57978255948989,0.545492241181669,0,0.121973706129595,0,0.116193942869518,0.310983165046111,0,0,0,0,0,0,0,0.354920400119532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0.343135620597051,0.329250856225877,0,0,0.277765335475589,0,0,0,0,0,0.144366447761074,0.462985512576611,0,0,0,0.492434012174795,3.04205544681009,0.891786973732369,0,0.16798212819886,0.425325291727159,1.16426079513703,0.871901815541886,0,2.46331618947972,1.49682337822484,1.24396869324463,0.288239906833923,0.37872730027914,0.253991577168676,0,0,0,0.102827492703324,0,0,0,0.43596006883328,0.07333828582095,0.904902010304444,0,0.845302752556,0.26593811658487,1.04007436911366,0.257207374262142,0,0.266422179016099,0.714889968290738,0,0,0,0.355391948742546,0,0,0,0.099972991182057,1.2162378064119,1.00451418286425,2.10833939483032,0.239624855491583,0,1.42636905040718,1.01346914667305,0.821905290201534,0.358121926479791,0.784596007954691,1.57624608161542,3.45004119775228,2.56686072559497,0.254094624222463,0,1.54657762555539,0.167516265334349,0,1.49801404789436,0,2.48649308061621,0.36807447515742,0.500170521059677,0.542530047399471,0.207970861530807,0.535286966391485,0,0,1.20378439891088,0,0,0,0,0.60818530127658,0.587403472388222,0,3.92859249633486,1.2942852049117,1.49418580924822,0,0,0,1.24053903909388,0.153461973288062,0.280660094433074,0.768834895534206,1.53512174720011,0.482561763430822,0,0.308419387605311,0.532685175939381,0.492762936082855,0,0.464841513839837,0,0.802025881213139,0.460404944679482,0.34444334449382,1.63882051206045,0.655622074797121,0,0.0770153371044148,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0.657779629937804,1.0457418040996,0.256450125116389,0,0,0.103041011647722,0.183138929636687,0.330037999682352,0.574265537996172,0,0,0.096670718292122,0.462145851343933,0.15350367472613,0.689182862422653,0.537101224341368,0,0.255679882248303,0.178064071293475,0.495854746082934,0.384380134730212,0.893288987462089,0.708104465988849,0,0.94443704049192,0.6970372701606,0,0.532306030317022,0,0.37064843820784,0.715624433709956,0.372158369359667,0,0.190630193923825,0,0.42793898803392,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| ||
|short_description=p5@CSGALNACT2 | |||
}} | }} |
Latest revision as of 05:41, 18 September 2015
Short description: | p5@CSGALNACT2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_CSGALNACT2_5end |
Coexpression cluster: | C3017_CD14_CD14CD16_Eosinophils_Mast_Neutrophils_Basophils_CD34 |
Association with transcript: | 28bp_to_ENST00000374464, ENST00000374466, NM_018590, uc001jam.1, uc001jan.2_5end |
EntrezGene: | CSGALNACT2 |
HGNC: | 24292 |
UniProt: | Q8N6G5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.71e-65 | 76 |
bone element | 1.56e-63 | 82 |
hematopoietic system | 4.56e-63 | 98 |
blood island | 4.56e-63 | 98 |
skeletal element | 3.12e-56 | 90 |
hemolymphoid system | 2.34e-55 | 108 |
immune system | 4.77e-50 | 93 |
skeletal system | 9.49e-49 | 100 |
musculoskeletal system | 2.70e-28 | 167 |
lateral plate mesoderm | 6.64e-26 | 203 |
connective tissue | 6.75e-20 | 371 |
mesoderm | 5.52e-12 | 315 |
mesoderm-derived structure | 5.52e-12 | 315 |
presumptive mesoderm | 5.52e-12 | 315 |