FFCP PHASE1:Hg19::chr10:99409396..99409400,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr10:99409396..99409400,+ to FFCP PHASE1:Hg19::chr10:99409396..99409400,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr10:99409396..99409400,+ | |||
|description=CAGE_peak_at_chr10:99409396..99409400,+ | |||
|id=chr10:99409396..99409400,+ | |||
|ontology_enrichment_celltype=CL:0000738!2.68e-24!140;CL:0002031!2.35e-22!124;CL:0002057!1.28e-21!42;CL:0000839!2.52e-21!70;CL:0000766!5.20e-21!76;CL:0000557!8.15e-21!71;CL:0002087!3.71e-20!119;CL:0000860!3.94e-20!45;CL:0002009!9.66e-20!65;CL:0002194!1.05e-18!63;CL:0000576!1.05e-18!63;CL:0000040!1.05e-18!63;CL:0000559!1.05e-18!63;CL:0000037!1.06e-17!172;CL:0000566!1.06e-17!172;CL:0002032!1.99e-17!165;CL:0000837!1.99e-17!165;CL:0000988!4.38e-16!182;CL:0000763!3.12e-15!112;CL:0000049!3.12e-15!112;CL:0002393!2.16e-09!9;CL:0002397!2.16e-09!9 | |||
|ontology_enrichment_celltype_v019=CL:0002393;3.50e-28;6!CL:0002397;3.50e-28;6!CL:0000576;1.15e-22;48!CL:0000766;1.93e-21;69!CL:0000860;6.14e-16;33!CL:0002057;6.14e-16;33!CL:0000473;1.82e-15;39!CL:0000234;1.82e-15;39!CL:0000767;2.69e-14;3!CL:0000738;7.07e-10;136!CL:0000094;1.66e-09;8!CL:0002087;1.93e-08;104!CL:0000763;3.73e-08;100!CL:0000624;1.44e-07;6!CL:0000623;2.50e-07;3!CL:0000875;5.25e-07;3!CL:0002396;5.25e-07;3!CL:0000081;6.31e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,4.05e-43,72;CL:0000473,3.26e-41,48;CL:0000234,3.26e-41,48;CL:0000860,5.83e-39,42;CL:0002057,5.83e-39,42;CL:0000738,7.41e-39,136;CL:0000839,5.41e-34,66;CL:0000557,2.07e-33,67;CL:0002031,2.62e-32,120;CL:0002194,6.31e-32,59;CL:0000576,6.31e-32,59;CL:0000040,6.31e-32,59;CL:0000559,6.31e-32,59;CL:0002393,9.86e-32,9;CL:0002397,9.86e-32,9;CL:0002087,1.36e-31,115;CL:0002009,9.94e-31,61;CL:0000037,4.93e-30,168;CL:0002032,1.18e-29,161;CL:0000837,1.18e-29,161;CL:0000988,4.02e-28,177;CL:0000763,9.51e-27,108;CL:0000049,9.51e-27,108;CL:0000767,3.50e-14,3;CL:0000134,6.47e-13,354;CL:0002320,1.66e-12,361;CL:0000219,4.57e-11,386;CL:0000094,1.89e-09,8;CL:0000048,2.65e-09,427;CL:0000723,4.65e-09,433;CL:0000034,9.59e-09,441;CL:0000624,8.22e-08,6;CL:0000623,1.78e-07,3;CL:0000825,1.78e-07,3;CL:0000875,5.61e-07,3;CL:0002396,5.61e-07,3;CL:0000081,6.92e-07,11 | |||
|ontology_enrichment_development_v019=CL:0002057;1.49e-27;42!CL:0000049;9.52e-10;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!5.55e-17!80;UBERON:0002390!4.97e-16!102;UBERON:0003061!4.97e-16!102;UBERON:0002193!1.77e-15!112;UBERON:0001474!2.94e-15!86;UBERON:0004765!3.23e-13!101;UBERON:0001434!3.23e-13!101;UBERON:0002405!9.55e-12!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,7.62e-29,76;UBERON:0001474,2.37e-26,82;UBERON:0002390,1.66e-25,98;UBERON:0003061,1.66e-25,98;UBERON:0002405,7.20e-25,93;UBERON:0004765,1.54e-23,90;UBERON:0002193,1.30e-22,108;UBERON:0001434,1.18e-20,100;UBERON:0002384,5.99e-12,371;UBERON:0003081,2.52e-10,203;UBERON:0002204,3.10e-10,167 | |||
|phase1_expression=0,0,0,0,0,0.872338524100369,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0,0.152826811495903,0.164201178899891,0,1.18009283054671,1.53531759238885,1.08371286321253,0,0,0,0,0.142169232487422,0,4.43196326825502,2.4065333696417,4.55722828503289,0,0,0.515151135268373,1.16318591023652,1.13362783106643,0.970336244751265,1.62700325833979,1.6446715520873,1.23882548358041,0.863077176966451,0.768482119587302,0.709446689665756,0.689491361473237,1.93645405075148,1.35426486594342,0.941211697713023,1.09162460023138,0,0,0.320929027076094,0.639337125799041,0.659702600373432,0.398927315243264,0,0.870627715885752,0,0,1.00499466102697,1.0429658368404,0.65156653411535,0,0.368277635987565,0,1.05627643155971,1.06302149982522,1.04829322754188,1.90958672949042,1.80212271409808,0.48217676009124,1.14005097496499,1.39241674039363,0.91332076882317,0,0,0,0.426730222566507,0.400395987036012,0,0,0,1.70763890732835,0,0,0,0,0,1.57367816091066,2.35806457649499,0.616804496998528,0,0,0,0,0.111410456885174,0,0.443067789167242,0.270803863765016,0.25618263945135,0.390178042679635,0.328875809207352,0,0.289803085735052,0.593146252648242,0.535081656179426,1.04535523804977,0.339928028092699,1.91610246800961,0,0.506039384039006,0,0,0,0.150575119077773,0.127986611154418,0,0.236777252044017,0,1.00803371612366,0.802320587350522,2.31719046212478,0,0,0,0,0,0.144846518960824,0,0,0,0,0.087834785693126,0.261958150995425,0,0,0,0.174129737299267,0.797747763113191,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0.33472061276467,0,0,0,0,0,0.17859945656816,0,0,0,0,0,0,3.87780264148325,0,0.496971951695318,0,0.397227542439656,0,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0.149448680551801,0,0.323745888736263,0.280901613404497,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0.300476117813194,0,0.358779271377724,0,0,0.300091096084402,0.103052529238439,0,0,0,0.0974370051611986,0,0,0,0.355009592516614,0,0,0,0.272746120590835,0,0,0,0,0.207322110030741,0,0.36497735907583,1.56449532329816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0.402115889646523,0.0925884451585296,0,0,0,0,0,0,0,0.570762456703795,0,0,0.246217006087397,0,0.743155811443641,0,0.16798212819886,0.141775097242386,0,0,0,0,0.176096868026452,1.24396869324463,0.288239906833923,1.8936365013957,0.063497894292169,0.381988425558278,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,1.2162378064119,0,4.21667878966063,0,0,0,0,0,0.179060963239896,0.224170287987055,0.591092280605782,1.72502059887614,4.10697716095195,0,0,0,0,0,0,0,0,0,0,0,0.623912584592421,0.356857977594324,0.473107245101804,0,0,0,0,0,0,0,0,0,0.413536052245775,1.50999940573032,0.533637789017222,0,0,0.30239029332968,0,0,0.280660094433074,0,0,0,0,0.154209693802656,0,0.164254312027618,0,0.116210378459959,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0.438519753291869,0.261435451024901,0,0,0,0.206082023295445,0,0,0,0,0,0,0.462145851343933,0.307007349452259,0.137836572484531,0,0,0.0852266274161009,0,0,0.384380134730212,0.638063562472921,0.2023155617111,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0,0,0,0,0,0.54907405947211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655894752046633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0.569647187174163,0,0,0,0,0,0,0,0,0,0.144269212976445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0.242721043499027,0,0.284136146806413,0.47748896947538,0,0.307160702099232,0,0.140669416410513,0,0.494411622680279,0.422250816255987,1.39473591775749,0,0,0,0.123084805461069,0,0,0,0.511572370226872,0,0,0,0.969332746095218,0.278304294485554,0,0.260427761085233,0.0874599999961957,0.724999575434793,0.341380344856499,0,0.472775363535873,1.03423011972439,0.583209226766509,0.173624994933292,0,0.120596438625408,0,0.110579259931225,0.295547618953547,0,0,0,0,0,0,0,0.108647371922008,0,0.183195186803725,0,0,0,0.332423363800313,0,0,0.167821586975843,0,0,0,0,0.282706142867882,0,0,0.176915129006678,0,0,0,0.208843899010911,0.202203398942031,0,0,0,0,0,0,1.20990716048664,0,0.252746318513952,0,0,0,0,0,0,0.284609546029793,0,0,0.195984794828755,0.0870592065804026,0,0.171986032471617,0,0.146178634172371,0,0.0969890164884194,0,0,0.274083849293502,0,0.126621591911757,0,0,0,0.19980960958213,0,0,0,0,0.372757606696298,0,0.135904206073614,0.104602846312333,0.101998217636322,0.866851769704557,0,0.136905378891993,0,0,0.788662062837943,0,0,0,0.399358000997982,0,0,0.134366944973453,1.08089965062721,0,0,0,0.0674035438541849,0.0984274815147488,0.0846733320657845,0,0.272406812223151,0,0,0.415440338029185,0.2249738915515,0.77380195455795,0.121499113316049,0.670869375198532,0,0.104909176269996,0,0,0.191915197319445,0,0,0,0,0,0,1.19730191562487,0.164185041498678,0.170388021785422,0,0,0,0,0,0.171086837884329,0,0.106787412567695,0,0,0.496166021811951,0.395223263795889,0,0,0,0.2506898940227,0,0,0,0,0.244052529803926,0.500763722825999,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0.467426619694449,0,0.189403005275089,0,0,0,0.151230923763239,0,0,0,0.449803112163605,0,0,0,0,0,0.761610424337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| ||
|short_description=p@chr10:99409396..99409400,+ | |||
}} | }} |
Latest revision as of 17:17, 23 July 2015
Short description: | p@chr10:99409396..99409400, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:99409396..99409400, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 7.62e-29 | 76 |
bone element | 2.37e-26 | 82 |
hematopoietic system | 1.66e-25 | 98 |
blood island | 1.66e-25 | 98 |
immune system | 7.20e-25 | 93 |
skeletal element | 1.54e-23 | 90 |
hemolymphoid system | 1.30e-22 | 108 |
skeletal system | 1.18e-20 | 100 |
connective tissue | 5.99e-12 | 371 |
lateral plate mesoderm | 2.52e-10 | 203 |
musculoskeletal system | 3.10e-10 | 167 |