FFCP PHASE1:Hg19::chr11:1780825..1780859,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr11:1780825..1780859,- to FFCP PHASE1:Hg19::chr11:1780825..1780859,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr11:1780825..1780859,- | |||
|coexpression_cluster_id=C587 | |||
|description=CAGE_peak_at_chr11:1780825..1780859,- | |||
|id=chr11:1780825..1780859,- | |||
|ontology_enrichment_celltype=CL:0000766!1.78e-14!76;CL:0000839!2.56e-14!70;CL:0000557!6.05e-13!71;CL:0002194!1.64e-12!63;CL:0000576!1.64e-12!63;CL:0000040!1.64e-12!63;CL:0000559!1.64e-12!63;CL:0002009!2.08e-11!65;CL:0002057!6.66e-09!42;CL:0000860!1.74e-08!45 | |||
|ontology_enrichment_celltype_v019=CL:0000473;2.78e-12;39!CL:0000234;2.78e-12;39!CL:0000860;3.64e-10;33!CL:0002057;3.64e-10;33!CL:0000766;9.12e-08;69!CL:0000576;3.65e-07;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,2.35e-17,72;CL:0000839,1.69e-16,66;CL:0000557,1.91e-15,67;CL:0002194,1.95e-14,59;CL:0000576,1.95e-14,59;CL:0000040,1.95e-14,59;CL:0000559,1.95e-14,59;CL:0002009,2.59e-13,61;CL:0000473,4.23e-13,48;CL:0000234,4.23e-13,48;CL:0000860,2.36e-09,42;CL:0002057,2.36e-09,42;CL:0000763,2.76e-07,108;CL:0000049,2.76e-07,108 | |||
|ontology_enrichment_development_v019=CL:0002057;3.76e-07;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!5.06e-12!80;UBERON:0002405!1.13e-11!115;UBERON:0001474!3.92e-11!86;UBERON:0000926!2.72e-10!448;UBERON:0004120!2.72e-10!448;UBERON:0006603!2.72e-10!448;UBERON:0004765!5.21e-10!101;UBERON:0001434!5.21e-10!101;UBERON:0002204!1.67e-08!167;UBERON:0000468!4.73e-08!659;UBERON:0003081!1.55e-07!216;UBERON:0002193!2.60e-07!112;UBERON:0002390!2.95e-07!102;UBERON:0003061!2.95e-07!102;UBERON:0000062!6.13e-07!511;UBERON:0000467!8.79e-07!625 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.04e-14,76;UBERON:0000926,1.09e-13,315;UBERON:0004120,1.09e-13,315;UBERON:0006603,1.09e-13,315;UBERON:0001474,1.22e-12,82;UBERON:0004765,2.15e-12,90;UBERON:0001434,6.38e-12,100;UBERON:0002405,2.97e-11,93;UBERON:0003081,1.98e-10,203;UBERON:0002390,2.11e-09,98;UBERON:0003061,2.11e-09,98;UBERON:0002204,6.43e-09,167;UBERON:0002193,8.22e-09,108 | |||
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| ||
|short_description=p@chr11:1780825..1780859,- | |||
}} | }} |
Latest revision as of 20:33, 23 July 2015
Short description: | p@chr11:1780825..1780859, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:1780825..1780859, - |
Coexpression cluster: | C587_Osteoblast_Monocytederived_CD14_Macrophage_leiomyoma_Adipocyte_Dendritic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 2.35e-17 | 72 |
myeloid lineage restricted progenitor cell | 1.69e-16 | 66 |
granulocyte monocyte progenitor cell | 1.91e-15 | 67 |
monopoietic cell | 1.95e-14 | 59 |
monocyte | 1.95e-14 | 59 |
monoblast | 1.95e-14 | 59 |
promonocyte | 1.95e-14 | 59 |
macrophage dendritic cell progenitor | 2.59e-13 | 61 |
defensive cell | 4.23e-13 | 48 |
phagocyte | 4.23e-13 | 48 |
classical monocyte | 2.36e-09 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.36e-09 | 42 |
myeloid cell | 2.76e-07 | 108 |
common myeloid progenitor | 2.76e-07 | 108 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.04e-14 | 76 |
mesoderm | 1.09e-13 | 315 |
mesoderm-derived structure | 1.09e-13 | 315 |
presumptive mesoderm | 1.09e-13 | 315 |
bone element | 1.22e-12 | 82 |
skeletal element | 2.15e-12 | 90 |
skeletal system | 6.38e-12 | 100 |
immune system | 2.97e-11 | 93 |
lateral plate mesoderm | 1.98e-10 | 203 |
hematopoietic system | 2.11e-09 | 98 |
blood island | 2.11e-09 | 98 |
musculoskeletal system | 6.43e-09 | 167 |
hemolymphoid system | 8.22e-09 | 108 |