FFCP PHASE1:Hg19::chr11:72433267..72433292,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr11:72433267..72433292,- to FFCP PHASE1:Hg19::chr11:72433267..72433292,-: NSchange) |
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(10 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=116985 | |EntrezGene=116985 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16925 | |HGNC=16925 | ||
|TSSclassifier=strong | |||
|UniProt=B2RTS2,Q96P48 | |UniProt=B2RTS2,Q96P48 | ||
|association_with_transcript=110bp_to_ENST00000334211,NM_001135190,NM_015242,uc001oss.2,uc009yth.2,uc010rre.1_5end | |||
|cluster_id=chr11:72433267..72433292,- | |||
|coexpression_cluster_id=C294 | |||
|description=CAGE_peak_4_at_ARAP1_5end | |||
|id=chr11:72433267..72433292,- | |||
|ontology_enrichment_celltype=CL:0002057!1.81e-24!42;CL:0002194!4.58e-23!63;CL:0000576!4.58e-23!63;CL:0000040!4.58e-23!63;CL:0000559!4.58e-23!63;CL:0000766!6.45e-23!76;CL:0002009!1.95e-22!65;CL:0000860!2.58e-20!45;CL:0002087!2.93e-20!119;CL:0000738!8.89e-19!140;CL:0000557!2.21e-18!71;CL:0000839!3.07e-17!70;CL:0000037!6.89e-17!172;CL:0000566!6.89e-17!172;CL:0000988!1.49e-16!182;CL:0000763!2.06e-16!112;CL:0000049!2.06e-16!112;CL:0002032!3.02e-16!165;CL:0000837!3.02e-16!165;CL:0002031!4.19e-15!124;CL:0000115!8.37e-09!35;CL:0002393!3.10e-07!9;CL:0002397!3.10e-07!9;CL:0002139!8.24e-07!24 | |||
|ontology_enrichment_celltype_v019=CL:0000473;1.16e-19;39!CL:0000234;1.16e-19;39!CL:0000860;5.22e-19;33!CL:0002057;5.22e-19;33!CL:0000576;2.60e-17;48!CL:0000766;4.28e-13;69!CL:0000763;2.38e-08;100!CL:0000115;2.57e-08;36!CL:0002087;2.27e-07;104!CL:0002139;3.01e-07;24!CL:0000791;4.67e-07;18!CL:0000789;4.67e-07;18!CL:0002419;4.67e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,2.36e-31,48;CL:0000234,2.36e-31,48;CL:0002194,5.59e-29,59;CL:0000576,5.59e-29,59;CL:0000040,5.59e-29,59;CL:0000559,5.59e-29,59;CL:0000766,1.01e-28,72;CL:0002009,9.29e-28,61;CL:0000860,6.13e-27,42;CL:0002057,6.13e-27,42;CL:0000557,5.09e-23,67;CL:0002087,1.16e-22,115;CL:0000839,1.55e-22,66;CL:0000738,9.49e-21,136;CL:0000763,1.98e-20,108;CL:0000049,1.98e-20,108;CL:0000037,4.21e-19,168;CL:0002032,2.00e-18,161;CL:0000837,2.00e-18,161;CL:0000988,2.20e-18,177;CL:0002031,3.28e-17,120;CL:0000115,6.66e-10,36;CL:0002393,7.57e-08,9;CL:0002397,7.57e-08,9;CL:0002139,2.23e-07,24;CL:0000791,4.75e-07,18;CL:0000789,4.75e-07,18;CL:0002420,4.75e-07,18;CL:0002419,4.75e-07,18;CL:0000790,4.75e-07,18;CL:0002078,4.88e-07,45 | |||
|ontology_enrichment_development_v019=CL:0002057;1.12e-19;42!CL:0000049;1.34e-07;108!CL:0000790;4.67e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!1.72e-21!112;UBERON:0002390!2.54e-21!102;UBERON:0003061!2.54e-21!102;UBERON:0007023!1.34e-20!115;UBERON:0003081!1.05e-18!216;UBERON:0002371!1.91e-14!80;UBERON:0002405!1.14e-12!115;UBERON:0001474!2.55e-11!86;UBERON:0004765!3.16e-08!101;UBERON:0001434!3.16e-08!101;UBERON:0001049!9.52e-08!57;UBERON:0005068!9.52e-08!57;UBERON:0006241!9.52e-08!57;UBERON:0007135!9.52e-08!57;UBERON:0001009!5.06e-07!113;UBERON:0000178!9.67e-07!15;UBERON:0000179!9.67e-07!15;UBERON:0000463!9.67e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;6.32e-07;15!UBERON:0000179;6.32e-07;15!UBERON:0000463;6.32e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,4.88e-26,108;UBERON:0002390,1.78e-25,98;UBERON:0003061,1.78e-25,98;UBERON:0003081,1.51e-22,203;UBERON:0007023,7.49e-22,114;UBERON:0002405,2.52e-20,93;UBERON:0002371,5.85e-18,76;UBERON:0001474,1.47e-14,82;UBERON:0004765,9.35e-12,90;UBERON:0001434,5.00e-09,100;UBERON:0001049,7.98e-08,56;UBERON:0005068,7.98e-08,56;UBERON:0006241,7.98e-08,56;UBERON:0007135,7.98e-08,56;UBERON:0000178,6.77e-07,15;UBERON:0000179,6.77e-07,15;UBERON:0000463,6.77e-07,15;UBERON:0001009,7.32e-07,112 | |||
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| ||
|short_description=p4@ARAP1 | |||
}} | }} |
Latest revision as of 01:30, 20 September 2015
Short description: | p4@ARAP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_ARAP1_5end |
Coexpression cluster: | C294_CD14_Macrophage_Monocytederived_CD14CD16_Neutrophils_Basophils_Peripheral |
Association with transcript: | 110bp_to_ENST00000334211, NM_001135190, NM_015242, uc001oss.2, uc009yth.2, uc010rre.1_5end |
EntrezGene: | ARAP1 |
HGNC: | 16925 |
UniProt: | B2RTS2Q96P48 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 4.88e-26 | 108 |
hematopoietic system | 1.78e-25 | 98 |
blood island | 1.78e-25 | 98 |
lateral plate mesoderm | 1.51e-22 | 203 |
adult organism | 7.49e-22 | 114 |
immune system | 2.52e-20 | 93 |
bone marrow | 5.85e-18 | 76 |
bone element | 1.47e-14 | 82 |
skeletal element | 9.35e-12 | 90 |
skeletal system | 5.00e-09 | 100 |
neural tube | 7.98e-08 | 56 |
neural rod | 7.98e-08 | 56 |
future spinal cord | 7.98e-08 | 56 |
neural keel | 7.98e-08 | 56 |
blood | 6.77e-07 | 15 |
haemolymphatic fluid | 6.77e-07 | 15 |
organism substance | 6.77e-07 | 15 |
circulatory system | 7.32e-07 | 112 |