FFCP PHASE1:Hg19::chr12:130388563..130388592,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr12:130388563..130388592,- to FFCP PHASE1:Hg19::chr12:130388563..130388592,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=121256 | |EntrezGene=121256 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29411 | |HGNC=29411 | ||
|TSSclassifier=strong | |||
|UniProt=Q14C87 | |UniProt=Q14C87 | ||
|association_with_transcript=-351bp_to_NM_133448,uc009zyl.1_5end | |||
|cluster_id=chr12:130388563..130388592,- | |||
|coexpression_cluster_id=C3253 | |||
|description=CAGE_peak_1_at_TMEM132D_5end | |||
|id=chr12:130388563..130388592,- | |||
|ontology_enrichment_celltype=CL:0000147!1.07e-15!14;CL:0000148!2.43e-12!10;CL:0000541!2.43e-12!10;CL:0000333!3.36e-12!41;CL:0000133!8.12e-12!59;CL:0000075!5.81e-09!27;CL:0000710!6.52e-09!20;CL:0000221!2.27e-08!71 | |||
|ontology_enrichment_celltype_v019=CL:0000148;2.38e-21;10!CL:0000147;8.38e-18;14!CL:0000710;5.33e-17;20!CL:0000075;4.07e-16;27!CL:0002322;8.61e-11;5!CL:0000064;2.76e-08;3!CL:0000067;2.76e-08;3!CL:0005012;2.76e-08;3!CL:0002304;2.76e-08;3!CL:0000128;3.30e-08;7!CL:0000126;3.30e-08;7!CL:0000127;3.30e-08;7!CL:0002077;3.97e-08;34!CL:0002605;4.07e-08;3!CL:0002567;1.34e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,3.31e-21,10;CL:0000541,3.31e-21,10;CL:0000147,1.21e-17,14;CL:0000710,6.61e-17,20;CL:0000075,4.68e-16,27;CL:0000133,1.88e-12,59;CL:0000333,4.59e-11,41;CL:0002322,1.22e-10,5;CL:0000221,2.70e-09,72;CL:0002077,1.16e-08,34;CL:0000128,2.42e-08,7;CL:0000126,2.42e-08,7;CL:0000127,2.42e-08,7;CL:0002453,2.42e-08,7;CL:0000064,2.81e-08,3;CL:0000067,2.81e-08,3;CL:0005012,2.81e-08,3;CL:0002304,2.81e-08,3;CL:0002605,4.34e-08,3;CL:0002567,1.09e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.26e-08;82!CL:0000133;2.12e-07;59 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005743!1.43e-55!86;UBERON:0002616!5.76e-55!59;UBERON:0000073!8.74e-55!94;UBERON:0001016!8.74e-55!94;UBERON:0003056!2.64e-54!61;UBERON:0003075!6.25e-54!86;UBERON:0007284!6.25e-54!86;UBERON:0001049!5.67e-52!57;UBERON:0005068!5.67e-52!57;UBERON:0006241!5.67e-52!57;UBERON:0007135!5.67e-52!57;UBERON:0001017!5.87e-52!82;UBERON:0000955!5.68e-51!69;UBERON:0006238!5.68e-51!69;UBERON:0002346!1.89e-50!90;UBERON:0002780!6.70e-49!41;UBERON:0001890!6.70e-49!41;UBERON:0006240!6.70e-49!41;UBERON:0003080!2.26e-47!42;UBERON:0000033!2.16e-42!123;UBERON:0001893!6.40e-42!34;UBERON:0002020!1.78e-41!34;UBERON:0003528!1.78e-41!34;UBERON:0002791!1.49e-40!33;UBERON:0001869!2.35e-40!32;UBERON:0000153!3.29e-39!129;UBERON:0007811!3.29e-39!129;UBERON:0004121!2.10e-37!169;UBERON:0000924!7.17e-36!173;UBERON:0006601!7.17e-36!173;UBERON:0000956!3.61e-32!25;UBERON:0000203!3.61e-32!25;UBERON:0002619!1.39e-28!22;UBERON:0001950!1.02e-26!20;UBERON:0007023!1.03e-14!115;UBERON:0000475!3.22e-12!365;UBERON:0000119!1.09e-11!312;UBERON:0002420!2.33e-11!9;UBERON:0007245!2.33e-11!9;UBERON:0010009!2.33e-11!9;UBERON:0010011!2.33e-11!9;UBERON:0000454!2.33e-11!9;UBERON:0001871!4.15e-11!7;UBERON:0000483!1.16e-10!309;UBERON:0002308!1.20e-10!9;UBERON:0000125!1.20e-10!9;UBERON:0000064!2.96e-10!219;UBERON:0000970!4.46e-10!20;UBERON:0007625!4.47e-10!11;UBERON:0001456!9.66e-10!21;UBERON:0000200!2.01e-09!6;UBERON:0000019!2.12e-09!19;UBERON:0000047!2.12e-09!19;UBERON:0004088!2.12e-09!19;UBERON:0003072!2.12e-09!19;UBERON:0003071!2.12e-09!19;UBERON:0004128!2.12e-09!19;UBERON:0002104!2.14e-09!21;UBERON:0002200!3.29e-09!11;UBERON:0006876!3.29e-09!11;UBERON:0009663!6.77e-09!7;UBERON:0001894!2.83e-08!7;UBERON:0006222!2.83e-08!7;UBERON:0000020!3.22e-08!23;UBERON:0000481!5.09e-08!347;UBERON:0000025!6.46e-08!194;UBERON:0002021!1.04e-07!5;UBERON:0001032!1.04e-07!24;UBERON:0004456!1.04e-07!24;UBERON:0003076!2.95e-07!15;UBERON:0003057!2.95e-07!15;UBERON:0000349!3.15e-07!5;UBERON:0001872!3.87e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;2.34e-52;32!UBERON:0002791;6.66e-49;32!UBERON:0001893;5.62e-48;34!UBERON:0003528;5.82e-47;34!UBERON:0002020;5.82e-47;34!UBERON:0000956;2.89e-46;25!UBERON:0000203;2.89e-46;25!UBERON:0001950;4.77e-40;20!UBERON:0002619;9.03e-40;22!UBERON:0002780;5.24e-39;41!UBERON:0001890;5.24e-39;41!UBERON:0000073;5.72e-26;53!UBERON:0002616;5.72e-26;53!UBERON:0000955;3.15e-20;68!UBERON:0001017;5.02e-19;75!UBERON:0001871;9.95e-17;6!UBERON:0000200;6.68e-16;6!UBERON:0001016;3.39e-13;83!UBERON:0002420;1.94e-12;9!UBERON:0007245;1.94e-12;9!UBERON:0010009;1.94e-12;9!UBERON:0010011;1.94e-12;9!UBERON:0000454;1.94e-12;9!UBERON:0000488;2.66e-10;4!UBERON:0000369;4.50e-10;4!UBERON:0002435;4.50e-10;4!UBERON:0000204;4.50e-10;4!UBERON:0002021;4.23e-09;5!UBERON:0001870;7.21e-09;3!UBERON:0000125;8.16e-09;9!UBERON:0002308;8.16e-09;9!UBERON:0009663;2.45e-08;7!UBERON:0001872;2.53e-08;5!UBERON:0001778;2.76e-08;3!UBERON:0001775;2.76e-08;3!UBERON:0000349;3.24e-08;5!UBERON:0005383;9.91e-08;3!UBERON:0005382;9.91e-08;3!UBERON:0007625;1.46e-07;11!UBERON:0010314;2.74e-07;132!UBERON:0002203;7.75e-07;6!UBERON:0001768;7.75e-07;6!UBERON:0002200;7.75e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001869,2.28e-57,32;UBERON:0002780,6.76e-57,41;UBERON:0001890,6.76e-57,41;UBERON:0003080,6.76e-57,41;UBERON:0006240,6.76e-57,41;UBERON:0003056,4.56e-54,61;UBERON:0001893,1.45e-53,34;UBERON:0002791,5.25e-53,32;UBERON:0003528,6.86e-53,34;UBERON:0002020,6.86e-53,34;UBERON:0000073,3.27e-50,53;UBERON:0002616,3.27e-50,53;UBERON:0001049,7.56e-50,56;UBERON:0005068,7.56e-50,56;UBERON:0006241,7.56e-50,56;UBERON:0007135,7.56e-50,56;UBERON:0003075,1.58e-48,82;UBERON:0007284,1.58e-48,82;UBERON:0000956,3.00e-46,25;UBERON:0000203,3.00e-46,25;UBERON:0002346,1.09e-45,86;UBERON:0001017,2.13e-41,81;UBERON:0000955,3.48e-41,68;UBERON:0006238,3.48e-41,68;UBERON:0001950,5.57e-40,20;UBERON:0001016,6.04e-40,89;UBERON:0002619,8.85e-40,22;UBERON:0010371,1.33e-35,104;UBERON:0010314,2.77e-31,132;UBERON:0004121,1.71e-25,171;UBERON:0000924,1.71e-25,171;UBERON:0006601,1.71e-25,171;UBERON:0001871,1.29e-16,6;UBERON:0000200,6.91e-16,6;UBERON:0007023,7.50e-15,114;UBERON:0011216,1.01e-12,223;UBERON:0002420,1.02e-12,9;UBERON:0007245,1.02e-12,9;UBERON:0010009,1.02e-12,9;UBERON:0010011,1.02e-12,9;UBERON:0000454,1.02e-12,9;UBERON:0000369,2.74e-10,4;UBERON:0002435,2.74e-10,4;UBERON:0000204,2.74e-10,4;UBERON:0010082,2.74e-10,4;UBERON:0000488,3.16e-10,4;UBERON:0000025,1.84e-09,192;UBERON:0002021,4.69e-09,5;UBERON:0000125,6.11e-09,9;UBERON:0002308,6.11e-09,9;UBERON:0001870,6.46e-09,3;UBERON:0009663,1.40e-08,7;UBERON:0001872,2.31e-08,5;UBERON:0000349,2.64e-08,5;UBERON:0001778,2.81e-08,3;UBERON:0001775,2.81e-08,3;UBERON:0005383,6.36e-08,3;UBERON:0005382,6.36e-08,3;UBERON:0007625,1.53e-07,11;UBERON:0000483,2.30e-07,306;UBERON:0000119,3.50e-07,309;UBERON:0002203,8.66e-07,6;UBERON:0001768,8.66e-07,6;UBERON:0002200,8.66e-07,6 | |||
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| ||
|short_description=p1@TMEM132D | |||
}} | }} |
Latest revision as of 08:13, 17 September 2015
Short description: | p1@TMEM132D |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TMEM132D_5end |
Coexpression cluster: | C3253_normal_pineal_insula_Mesothelial_Astrocyte_temporal_occipital |
Association with transcript: | -351bp_to_NM_133448, uc009zyl.1_5end |
EntrezGene: | TMEM132D |
HGNC: | 29411 |
UniProt: | Q14C87 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 3.31e-21 | 10 |
melanoblast | 3.31e-21 | 10 |
pigment cell | 1.21e-17 | 14 |
neurecto-epithelial cell | 6.61e-17 | 20 |
columnar/cuboidal epithelial cell | 4.68e-16 | 27 |
neurectodermal cell | 1.88e-12 | 59 |
migratory neural crest cell | 4.59e-11 | 41 |
embryonic stem cell | 1.22e-10 | 5 |
ectodermal cell | 2.70e-09 | 72 |
ecto-epithelial cell | 1.16e-08 | 34 |
oligodendrocyte | 2.42e-08 | 7 |
macroglial cell | 2.42e-08 | 7 |
astrocyte | 2.42e-08 | 7 |
oligodendrocyte precursor cell | 2.42e-08 | 7 |
ciliated cell | 2.81e-08 | 3 |
ciliated epithelial cell | 2.81e-08 | 3 |
multi-ciliated epithelial cell | 2.81e-08 | 3 |
non-pigmented ciliary epithelial cell | 2.81e-08 | 3 |
astrocyte of the cerebral cortex | 4.34e-08 | 3 |
light melanocyte | 1.09e-07 | 3 |