FFCP PHASE1:Hg19::chr12:28116496..28116507,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr12:28116496..28116507,- | |||
|coexpression_cluster_id=C812 | |||
|description=CAGE_peak_at_chr12:28116496..28116507,- | |||
|id=chr12:28116496..28116507,- | |||
|ontology_enrichment_celltype=CL:0002076!2.11e-17!43;CL:0000244!5.60e-14!4;CL:0000731!5.60e-14!4;CL:0000066!2.06e-13!254;CL:0002159!5.69e-12!13;CL:0000223!1.61e-11!59;CL:0002368!2.43e-11!13;CL:0002166!2.91e-11!3;CL:0002621!6.84e-11!3;CL:0002251!1.49e-08!21 | |||
|ontology_enrichment_celltype_v019=CL:0002166;2.87e-50;3!CL:0002159;1.59e-29;14!CL:0000244;1.27e-17;4!CL:0000731;1.27e-17;4!CL:0002077;1.14e-10;34!CL:0000317;1.51e-09;2!CL:1000448;1.51e-09;2!CL:0002308;1.51e-09;2!CL:0002140;1.51e-09;2!CL:0002076;2.82e-09;42!CL:0000362;2.96e-08;9!CL:0002231;5.80e-07;3!CL:0002328;8.86e-07;3!CL:0002621;8.86e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002166,1.89e-50,3;CL:0002159,1.22e-29,14;CL:0000244,1.57e-17,4;CL:0000731,1.57e-17,4;CL:0002077,2.76e-12,34;CL:0002076,7.07e-10,42;CL:0000317,1.12e-09,2;CL:1000448,1.12e-09,2;CL:0002308,1.12e-09,2;CL:0002140,1.12e-09,2;CL:0000066,1.64e-08,253;CL:0000362,2.75e-08,9;CL:0000223,3.77e-07,58;CL:0002231,5.80e-07,3;CL:0002621,8.62e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000365!2.31e-16!5;UBERON:0005910!1.42e-13!6;UBERON:0001949!6.84e-11!3;UBERON:0004119!9.41e-11!169;UBERON:0000925!9.41e-11!169;UBERON:0006595!9.41e-11!169;UBERON:0001004!1.14e-08!72;UBERON:0001708!1.58e-08!4;UBERON:0001704!1.58e-08!4;UBERON:0005911!4.28e-07!82 | |||
|ontology_enrichment_uberon_v019=UBERON:0001708;6.31e-38;4!UBERON:0008895;6.31e-38;4!UBERON:0011159;1.64e-30;5!UBERON:0000365;2.66e-14;5!UBERON:0011137;2.88e-14;11!UBERON:0010323;2.88e-14;11!UBERON:0000486;4.54e-13;12!UBERON:0005910;4.42e-12;6!UBERON:0000075;5.30e-10;16!UBERON:0002419;1.51e-09;2!UBERON:0007771;1.51e-09;2!UBERON:0003297;1.51e-09;2!UBERON:0001821;1.51e-09;2!UBERON:0003487;1.51e-09;2!UBERON:0001820;1.51e-09;2!UBERON:0005911;1.90e-07;36!UBERON:0004815;8.86e-07;3!UBERON:0002031;8.86e-07;3!UBERON:0001949;8.86e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001708,4.61e-38,4;UBERON:0008895,4.61e-38,4;UBERON:0011159,1.28e-30,5;UBERON:0010188,1.19e-25,6;UBERON:0002539,1.19e-25,6;UBERON:0008816,1.19e-25,6;UBERON:0010323,2.57e-14,11;UBERON:0000365,3.15e-14,5;UBERON:0005910,5.08e-12,6;UBERON:0011137,2.20e-11,14;UBERON:0003102,3.54e-10,99;UBERON:0000075,4.91e-10,16;UBERON:0002419,1.12e-09,2;UBERON:0007771,1.12e-09,2;UBERON:0003297,1.12e-09,2;UBERON:0001821,1.12e-09,2;UBERON:0003487,1.12e-09,2;UBERON:0001820,1.12e-09,2;UBERON:0005089,1.12e-09,2;UBERON:0005088,1.12e-09,2;UBERON:0008814,5.53e-09,18;UBERON:0000033,1.89e-07,56;UBERON:0001949,8.62e-07,3 | |||
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| 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| ||
|short_description=p@chr12:28116496..28116507,- | |||
}} | }} |
Latest revision as of 07:55, 24 July 2015
Short description: | p@chr12:28116496..28116507, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:28116496..28116507, - |
Coexpression cluster: | C812_Prostate_Urothelial_Mallassezderived_Sebocyte_Keratinocyte_Gingival_Small |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of Malassez | 1.89e-50 | 3 |
general ecto-epithelial cell | 1.22e-29 | 14 |
transitional epithelial cell | 1.57e-17 | 4 |
urothelial cell | 1.57e-17 | 4 |
ecto-epithelial cell | 2.76e-12 | 34 |
endo-epithelial cell | 7.07e-10 | 42 |
sebum secreting cell | 1.12e-09 | 2 |
epithelial cell of sweat gland | 1.12e-09 | 2 |
epithelial cell of skin gland | 1.12e-09 | 2 |
acinar cell of sebaceous gland | 1.12e-09 | 2 |
epithelial cell | 1.64e-08 | 253 |
epidermal cell | 2.75e-08 | 9 |
endodermal cell | 3.77e-07 | 58 |
epithelial cell of prostate | 5.80e-07 | 3 |
gingival epithelial cell | 8.62e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
jaw skeleton | 4.61e-38 | 4 |
splanchnocranium | 4.61e-38 | 4 |
primary subdivision of cranial skeletal system | 1.28e-30 | 5 |
protuberance | 1.19e-25 | 6 |
pharyngeal arch | 1.19e-25 | 6 |
embryonic head | 1.19e-25 | 6 |
cranial skeletal system | 2.57e-14 | 11 |
urothelium | 3.15e-14 | 5 |
transitional epithelium | 5.08e-12 | 6 |
axial skeletal system | 2.20e-11 | 14 |
surface structure | 3.54e-10 | 99 |
subdivision of skeletal system | 4.91e-10 | 16 |
skin gland | 1.12e-09 | 2 |
epidermis gland | 1.12e-09 | 2 |
gland of integumental system | 1.12e-09 | 2 |
sebaceous gland | 1.12e-09 | 2 |
skin sebaceous gland | 1.12e-09 | 2 |
sweat gland | 1.12e-09 | 2 |
sweat gland placode | 1.12e-09 | 2 |
sebaceous gland placode | 1.12e-09 | 2 |
pharyngeal arch system | 5.53e-09 | 18 |
head | 1.89e-07 | 56 |
gingival epithelium | 8.62e-07 | 3 |