FFCP PHASE1:Hg19::chr13:46701689..46701711,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr13:46701689..46701711,- to FFCP PHASE1:Hg19::chr13:46701689..46701711,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3936 | |EntrezGene=3936 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=6528 | |HGNC=6528 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-457bp_to_BC015001_5end | |||
|cluster_id=chr13:46701689..46701711,- | |||
|coexpression_cluster_id=C13 | |||
|description=CAGE_peak_6_at_LCP1_5end | |||
|id=chr13:46701689..46701711,- | |||
|ontology_enrichment_celltype=CL:0000037!2.51e-81!172;CL:0000566!2.51e-81!172;CL:0000988!5.00e-78!182;CL:0002032!8.51e-77!165;CL:0000837!8.51e-77!165;CL:0000738!1.40e-76!140;CL:0002031!2.64e-61!124;CL:0002087!3.84e-60!119;CL:0000763!5.76e-52!112;CL:0000049!5.76e-52!112;CL:0000766!2.92e-45!76;CL:0000557!1.17e-39!71;CL:0002009!3.10e-38!65;CL:0000839!4.90e-38!70;CL:0002194!1.82e-36!63;CL:0000576!1.82e-36!63;CL:0000040!1.82e-36!63;CL:0000559!1.82e-36!63;CL:0002057!2.70e-32!42;CL:0000860!7.75e-29!45;CL:0000542!1.96e-20!53;CL:0000051!1.96e-20!53;CL:0000838!9.17e-20!52;CL:0000134!1.38e-18!358;CL:0002320!2.88e-17!365;CL:0000219!9.23e-15!390;CL:0000084!1.13e-11!25;CL:0000827!1.13e-11!25;CL:0000451!4.84e-09!10;CL:0000990!1.07e-08!8;CL:0000048!1.13e-08!430;CL:0000034!2.63e-08!444;CL:0002393!3.64e-08!9;CL:0002397!3.64e-08!9;CL:0000723!5.33e-08!436;CL:0000945!5.54e-08!24;CL:0000826!5.54e-08!24;CL:0000094!1.55e-07!8;CL:0000791!2.20e-07!18;CL:0000789!2.20e-07!18;CL:0002420!2.20e-07!18;CL:0002419!2.20e-07!18;CL:0000790!2.20e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:0000473;5.24e-35;39!CL:0000234;5.24e-35;39!CL:0000860;1.04e-34;33!CL:0002057;1.04e-34;33!CL:0000576;2.78e-29;48!CL:0000766;2.96e-26;69!CL:0000738;2.24e-20;136!CL:0002087;2.35e-20;104!CL:0000763;7.29e-17;100!CL:0000988;3.05e-15;177!CL:0000990;2.52e-12;8!CL:0000094;7.38e-11;8!CL:0000084;6.53e-10;25!CL:0000451;1.20e-09;10!CL:0000542;3.16e-09;53!CL:0000081;3.17e-09;11!CL:0000219;4.57e-09;193!CL:0000235;9.70e-09;6!CL:0000840;1.74e-08;5!CL:0000453;4.32e-08;5!CL:0000945;1.88e-07;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,2.41e-93,136;CL:0000037,3.12e-90,168;CL:0000988,4.86e-89,177;CL:0002032,5.29e-88,161;CL:0000837,5.29e-88,161;CL:0002087,1.67e-75,115;CL:0002031,2.27e-73,120;CL:0000763,1.71e-66,108;CL:0000049,1.71e-66,108;CL:0000766,1.99e-66,72;CL:0002009,2.81e-59,61;CL:0000557,3.73e-58,67;CL:0002194,1.58e-56,59;CL:0000576,1.58e-56,59;CL:0000040,1.58e-56,59;CL:0000559,1.58e-56,59;CL:0000473,2.26e-54,48;CL:0000234,2.26e-54,48;CL:0000839,2.63e-54,66;CL:0000860,1.08e-46,42;CL:0002057,1.08e-46,42;CL:0000134,5.86e-26,354;CL:0002320,8.57e-25,361;CL:0000219,1.02e-20,386;CL:0000542,5.64e-18,53;CL:0000051,5.64e-18,53;CL:0000838,4.15e-17,52;CL:0000048,8.09e-16,427;CL:0000723,3.75e-15,433;CL:0000034,2.70e-14,441;CL:0000990,1.88e-12,8;CL:0000094,1.09e-10,8;CL:0000084,4.77e-10,25;CL:0000827,4.77e-10,25;CL:0002393,7.76e-10,9;CL:0002397,7.76e-10,9;CL:0000451,9.52e-10,10;CL:0000081,4.38e-09,11;CL:0000235,6.75e-09,6;CL:0000840,1.47e-08,5;CL:0001029,1.47e-08,5;CL:0000453,3.72e-08,5;CL:0000945,1.87e-07,24;CL:0000826,1.87e-07,24 | |||
|ontology_enrichment_development_v019=CL:0002057;7.80e-34;42!CL:0000049;2.33e-17;108!CL:0000051;3.16e-09;53 | |||
|ontology_enrichment_disease=DOID:2531!3.31e-16!51;DOID:0060083!3.31e-16!51;DOID:1240!2.65e-11!39;DOID:0060058!3.71e-08!10;DOID:8692!3.73e-07!31 | |||
|ontology_enrichment_disease_v019=DOID:0060058;7.95e-10;10!DOID:2531;5.00e-09;51!DOID:0060083;5.00e-09;51 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,1.57e-14,51;DOID:0060083,1.57e-14,51;DOID:0060058,7.73e-10,10;DOID:1240,7.14e-08,39 | |||
|ontology_enrichment_uberon=UBERON:0002390!5.05e-49!102;UBERON:0003061!5.05e-49!102;UBERON:0002193!6.18e-44!112;UBERON:0002371!1.32e-34!80;UBERON:0001474!3.03e-30!86;UBERON:0002405!9.86e-29!115;UBERON:0004765!1.80e-22!101;UBERON:0001434!1.80e-22!101;UBERON:0002384!2.11e-16!375;UBERON:0000178!5.08e-11!15;UBERON:0000179!5.08e-11!15;UBERON:0000463!5.08e-11!15;UBERON:0003081!6.20e-09!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.72e-14;15!UBERON:0000179;2.72e-14;15!UBERON:0000463;2.72e-14;15!UBERON:0002390;5.70e-08;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.89e-66,98;UBERON:0003061,1.89e-66,98;UBERON:0002193,7.10e-60,108;UBERON:0002371,8.92e-51,76;UBERON:0002405,2.94e-46,93;UBERON:0001474,1.43e-45,82;UBERON:0004765,1.00e-39,90;UBERON:0001434,9.23e-34,100;UBERON:0002384,6.96e-24,371;UBERON:0003081,3.74e-20,203;UBERON:0000178,3.86e-14,15;UBERON:0000179,3.86e-14,15;UBERON:0000463,3.86e-14,15;UBERON:0002204,7.15e-13,167 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.50839093912912,3.28402357799783,1.81034797021462,1.18009283054671,1.15148819429164,2.16742572642506,0,0,0,1.00707360754392,2.98555388223585,0.587200878669695,0.553995408531877,3.60980005446255,2.17010870715852,0.671746422719773,1.94336199611388,1.03030227053675,3.48955773070955,1.13362783106643,1.4555043671269,5.57829688573643,2.05583944010913,4.02618282163635,5.46615545412086,3.58624989140741,4.7296445977717,4.13694816883942,2.5819387343353,4.06279459783025,5.27078550719293,2.18324920046277,3.14612878223118,5.50951006267625,2.56743221660875,5.75403413219137,1.9791078011203,1.39624560335142,1.27867425159808,13.3496249769149,5.10646702222026,1.86846674698672,7.78870862295904,6.25779502104242,3.04064382587163,7.26479403160043,4.41933163185078,6.32924774881769,6.76016916198214,7.22854619881148,4.82214884669265,2.80821577866238,3.75442232103766,2.08943262706204,3.42015292489498,5.56966696157452,4.20127553658658,0,0,0,0.426730222566507,0.400395987036012,0.574752439954483,0,0,1.1384259382189,2.93618594685469,0.382273228125229,0,0,0.790152254325231,0.786839080455332,1.17903228824749,2.2616164889946,2.34061093546949,0.651844533267181,0.473447805734733,1.94826728407911,2.33961959458865,1.76763544484902,1.55073726208535,2.16643091012012,2.43373507478783,2.86130564631732,1.31550323682941,3.31620021343018,2.60822777161547,0.593146252648242,0,1.04535523804977,1.69964014046349,0.383220493601921,1.71813722741315,4.04831507231205,0.95569624297229,1.30216690771284,0,1.20460095262218,1.27986611154418,1.24930726552346,0.236777252044017,0,1.41124720257313,3.7441627409691,1.59306844271079,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9472843619281,4.70150290708022,10.9025527625469,2.14641561874808,0.571994910780128,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.9534125230819,23.2668158488995,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386521706326594,0,0,0,0,0.69716365721711,0.310983165046111,0.504641701751257,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.53510069643662,0,0,7.06340959063441,0.368965315629341,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96973604869918,6.08411089362018,2.82399208348584,0,0.16798212819886,0,0.447792613514241,0.290633938513962,0.383382679165211,1.47798971368783,1.67292024625129,1.4512968087854,0.432359860250884,0.88369703398466,0,0.381988425558278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0.355391948742546,0,0,0,0,6.08118903205952,5.02257091432126,35.8417697121154,0,0,0,0,0,0,4.81966119172167,0.788123040807709,3.01878604803324,1.79680250791648,0,0,0,0.167516265334349,0,55.4265197720915,143.597500417932,13.2612964299531,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03384013061444,4.09856981555372,1.17400313583789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.604297247958111,0.200506470303285,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0.412164046590889,0,0,0,0,0,0,0,0,0,0,0,0.255679882248303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0.376575203107117,0,0,0,0,4.56702848308952,3.82318603571188,6.83576624608995,0.952927101831156,2.05681136543097,1.94541993357815,2.16012574895246,5.55187623405989,0,0,0,3.15865397713722,0.432807638929335,1.4939787103167,2.71024663638998,3.99158742865633,1.1490322207942,0.846694330895531,0,1.12318871245384,2.73881614839831,3.29027781123349,0,1.01575066680962,2.24823305145179,5.44859209415828,0,7.90062292938259,1.22896305723383,0.894704431569664,1.16794399198336,1.17232857241224,0,0,0.540911356951966,0.33307196799782,0,0,0.293016358543788,0,0.66866030566487,0,0,0,0,0,0,0,2.63686198762815,0,0.19924798825107,0.276283915531148,0.503865495708552,0,2.58478091468246,0,0,0,3.06943422136123,0.0986434056369336,4.7896618469388,0,0,0.278304294485554,0,0,0,0,0,0,0,0.344743373241465,0,0,0,0,0,0,0,0,0,0,0,0.455768223388005,0,2.69272933229316,0,0.31900115973192,0.0915975934018623,0,12.2631957834884,0.784901281975124,2.32696354660219,0.225595660617181,0.588187602953219,0,0,0.158936578980379,0,0,0,0,0,0,0,2.37216902944498,2.47127877893006,1.35748534357092,0.067401132980677,0.802577647298789,0,2.73682183823499,0.19566461893209,0,0.394584402849391,0,0,0.31593289814244,0.300646838828985,0.207376382794494,0,0,0,0,0,0,0.173559738335131,0.195984794828755,0,2.09672001890436,0,0,0,0,0,0,0.225980740780532,0.548167698587004,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,3.94331031418972,0,0,0,0,0,0,0,0,0,0,0,0,0,5.08039992394707,0,0.272406812223151,0,0,0,6.29926896344201,4.6428117273477,0,0,0.236417121897595,0.104909176269996,0,0.537862017998534,0,0,0,0,0,0,0,0,0.656740165994712,0,0,0.439656701034247,0,0,0,0,0.704815022316672,0.320362237703084,0.157204305099666,1.24271716604159,3.96932817449561,2.76656284657122,3.16660755790329,0.638341257770182,0,0,0,0,0,0,0.122026264901963,0,0.573409195690071,0.332787154610557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159296767163702,0,0.1552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| ||
|short_description=p6@LCP1 | |||
}} | }} |
Latest revision as of 13:29, 17 September 2015
Short description: | p6@LCP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_LCP1_5end |
Coexpression cluster: | C13_Neutrophils_Eosinophils_CD14_Monocytederived_Whole_Peripheral_CD4 |
Association with transcript: | -457bp_to_BC015001_5end |
EntrezGene: | LCP1 |
HGNC: | 6528 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.89e-66 | 98 |
blood island | 1.89e-66 | 98 |
hemolymphoid system | 7.10e-60 | 108 |
bone marrow | 8.92e-51 | 76 |
immune system | 2.94e-46 | 93 |
bone element | 1.43e-45 | 82 |
skeletal element | 1.00e-39 | 90 |
skeletal system | 9.23e-34 | 100 |
connective tissue | 6.96e-24 | 371 |
lateral plate mesoderm | 3.74e-20 | 203 |
blood | 3.86e-14 | 15 |
haemolymphatic fluid | 3.86e-14 | 15 |
organism substance | 3.86e-14 | 15 |
musculoskeletal system | 7.15e-13 | 167 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 1.57e-14 | 51 |
immune system cancer | 1.57e-14 | 51 |
lymphoma | 7.73e-10 | 10 |
leukemia | 7.14e-08 | 39 |