FFCP PHASE1:Hg19::chr14:36989379..36989390,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7080 | |EntrezGene=7080 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11825 | |HGNC=11825 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=25bp_to_uc001wtu.2,uc001wtv.2_5end | |||
|cluster_id=chr14:36989379..36989390,- | |||
|coexpression_cluster_id=C1394 | |||
|description=CAGE_peak_8_at_NKX2-1_5end | |||
|id=chr14:36989379..36989390,- | |||
|ontology_enrichment_celltype=CL:0002368!1.79e-13!13;CL:0000082!3.23e-07!19 | |||
|ontology_enrichment_celltype_v019=CL:0000322;4.44e-15;3!CL:0000082;5.13e-14;19!CL:0002553;3.64e-12;1!CL:0000167;1.25e-11;1!CL:0000164;1.25e-11;1!CL:0000502;1.25e-11;1!CL:0000172;1.25e-11;1!CL:0000173;1.25e-11;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000322,3.72e-15,3;CL:0000082,4.66e-14,19;CL:0002553,3.27e-12,1;CL:0000167,8.64e-12,1;CL:0000164,8.64e-12,1;CL:0000502,8.64e-12,1;CL:0000172,8.64e-12,1;CL:0000173,8.64e-12,1;CL:0002351,8.64e-12,1 | |||
|ontology_enrichment_development_v019=UBERON:0007123;7.11e-34;5!UBERON:0008947;2.86e-17;29!UBERON:0001041;1.13e-16;30!CL:0002351;1.25e-11;1 | |||
|ontology_enrichment_disease=DOID:305!4.97e-07!106 | |||
|ontology_enrichment_disease_v019=DOID:0050615;1.17e-16;16!DOID:3112;3.64e-12;1!DOID:1324;8.59e-12;15!DOID:0050619;1.25e-11;1!DOID:1357;1.25e-11;1!DOID:4430;1.25e-11;1!DOID:3905;1.96e-11;9!DOID:3908;1.10e-09;5!DOID:1325;4.33e-07;7!DOID:3904;4.33e-07;7!DOID:3910;9.43e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:0050615,1.19e-16,16;DOID:3112,4.06e-12,1;DOID:1324,8.36e-12,15;DOID:4430,8.64e-12,1;DOID:0050619,1.47e-11,1;DOID:1357,1.47e-11,1;DOID:3905,1.96e-11,9;DOID:3908,1.10e-09,5;DOID:1325,4.33e-07,7;DOID:3904,4.33e-07,7;DOID:3910,9.44e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0000065!1.70e-17!53;UBERON:0008947!1.86e-16!38;UBERON:0003258!1.86e-16!38;UBERON:0001004!2.23e-14!72;UBERON:0002048!1.69e-12!22;UBERON:0000117!1.69e-12!22;UBERON:0000171!1.69e-12!22;UBERON:0000170!1.69e-12!22;UBERON:0005597!1.69e-12!22;UBERON:0000118!1.69e-12!22;UBERON:0002046!8.74e-11!5;UBERON:0004117!8.74e-11!5;UBERON:0007689!8.74e-11!5;UBERON:0007123!8.74e-11!5;UBERON:0003091!8.74e-11!5;UBERON:0005178!2.16e-10!34;UBERON:0002224!2.16e-10!34;UBERON:0005181!5.12e-10!35;UBERON:0004119!5.16e-09!169;UBERON:0000925!5.16e-09!169;UBERON:0006595!5.16e-09!169;UBERON:0005153!4.50e-08!37;UBERON:0000072!5.15e-08!46;UBERON:0005911!7.08e-08!82;UBERON:0001007!3.22e-07!155;UBERON:0001555!3.22e-07!155;UBERON:0007026!3.22e-07!155;UBERON:0004802!3.23e-07!19;UBERON:0000115!3.23e-07!19;UBERON:0000369!5.11e-07!4;UBERON:0002435!5.11e-07!4;UBERON:0000204!5.11e-07!4;UBERON:0010082!5.11e-07!4;UBERON:0001873!5.33e-07!2;UBERON:0010122!5.33e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0002046;7.11e-34;5!UBERON:0002048;9.39e-30;22!UBERON:0000117;9.39e-30;22!UBERON:0000171;9.39e-30;22!UBERON:0000170;9.39e-30;22!UBERON:0005178;2.63e-16;34!UBERON:0002224;2.63e-16;34!UBERON:0004821;4.44e-15;3!UBERON:0007499;4.44e-15;3!UBERON:0003215;4.44e-15;3!UBERON:0010368;4.44e-15;3!UBERON:0009911;4.44e-15;3!UBERON:0002299;4.44e-15;3!UBERON:0006524;4.44e-15;3!UBERON:0008874;4.44e-15;3!UBERON:0002169;4.44e-15;3!UBERON:0004894;4.44e-15;3!UBERON:0005181;4.99e-15;35!UBERON:0004802;5.13e-14;19!UBERON:0000115;5.13e-14;19!UBERON:0004807;4.30e-12;22!UBERON:0002171;1.25e-11;1!UBERON:0001764;1.25e-11;1!UBERON:0001825;1.25e-11;1!UBERON:0006518;1.25e-11;1!UBERON:0008949;1.25e-11;1!UBERON:0000101;1.25e-11;1!UBERON:0002167;1.25e-11;1!UBERON:0009856;1.51e-11;4!UBERON:0000065;2.03e-10;44!UBERON:0000915;1.09e-07;52!UBERON:0001004;1.85e-07;65!UBERON:0004903;9.43e-07;2!UBERON:0002173;9.43e-07;2!UBERON:0002186;9.43e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002046,7.12e-34,5;UBERON:0004117,7.12e-34,5;UBERON:0007689,7.12e-34,5;UBERON:0007123,7.12e-34,5;UBERON:0003091,7.12e-34,5;UBERON:0002048,8.71e-30,22;UBERON:0000117,8.71e-30,22;UBERON:0000171,8.71e-30,22;UBERON:0000170,8.71e-30,22;UBERON:0005597,8.71e-30,22;UBERON:0000118,8.71e-30,22;UBERON:0005153,5.12e-22,37;UBERON:0005911,7.46e-20,82;UBERON:0005178,5.56e-19,34;UBERON:0002224,5.56e-19,34;UBERON:0005181,2.05e-18,35;UBERON:0005157,4.25e-17,47;UBERON:0008947,6.84e-17,38;UBERON:0003258,6.84e-17,38;UBERON:0009722,1.39e-15,11;UBERON:0007690,1.39e-15,11;UBERON:0004821,3.72e-15,3;UBERON:0003215,3.72e-15,3;UBERON:0010368,3.72e-15,3;UBERON:0009911,3.72e-15,3;UBERON:0002299,3.72e-15,3;UBERON:0006524,3.72e-15,3;UBERON:0008874,3.72e-15,3;UBERON:0002169,3.72e-15,3;UBERON:0004894,3.72e-15,3;UBERON:0004802,4.66e-14,19;UBERON:0000115,4.66e-14,19;UBERON:0000915,4.22e-12,52;UBERON:0002171,1.19e-11,1;UBERON:0006518,1.19e-11,1;UBERON:0008949,1.19e-11,1;UBERON:0000101,1.19e-11,1;UBERON:0002167,1.19e-11,1;UBERON:0000065,1.28e-11,54;UBERON:0001764,1.47e-11,1;UBERON:0001825,1.47e-11,1;UBERON:0001004,2.27e-10,74;UBERON:0001007,2.66e-10,145;UBERON:0001555,2.66e-10,145;UBERON:0007026,2.66e-10,145;UBERON:0008814,1.30e-09,18;UBERON:0004807,1.67e-09,28;UBERON:0004119,3.72e-09,160;UBERON:0000925,3.72e-09,160;UBERON:0006595,3.72e-09,160;UBERON:0001048,1.02e-07,160;UBERON:0005177,2.56e-07,101;UBERON:0001041,7.49e-07,87;UBERON:0004903,9.44e-07,2;UBERON:0002173,9.44e-07,2;UBERON:0002186,9.44e-07,2 | |||
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| ||
|short_description=p8@NKX2-1 | |||
}} | }} |
Latest revision as of 22:31, 19 September 2015
Short description: | p8@NKX2-1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_NKX2-1_5end |
Coexpression cluster: | C1394_large_bronchioalveolar_prostate_nonsmall_papillary_small_Alveolar |
Association with transcript: | 25bp_to_uc001wtu.2, uc001wtv.2_5end |
EntrezGene: | NKX2-1 |
HGNC: | 11825 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pneumocyte | 3.72e-15 | 3 |
epithelial cell of lung | 4.66e-14 | 19 |
lung fibroblast | 3.27e-12 | 1 |
peptide hormone secreting cell | 8.64e-12 | 1 |
enteroendocrine cell | 8.64e-12 | 1 |
type D enteroendocrine cell | 8.64e-12 | 1 |
somatostatin secreting cell | 8.64e-12 | 1 |
pancreatic D cell | 8.64e-12 | 1 |
progenitor cell of endocrine pancreas | 8.64e-12 | 1 |
Ontology term | p-value | n |
---|---|---|
respiratory system cancer | 1.19e-16 | 16 |
papillary adenocarcinoma | 4.06e-12 | 1 |
lung cancer | 8.36e-12 | 15 |
somatostatinoma | 8.64e-12 | 1 |
paranasal sinus cancer | 1.47e-11 | 1 |
maxillary sinus cancer | 1.47e-11 | 1 |
lung carcinoma | 1.96e-11 | 9 |
non-small cell lung carcinoma | 1.10e-09 | 5 |
bronchus cancer | 4.33e-07 | 7 |
bronchogenic carcinoma | 4.33e-07 | 7 |
lung adenocarcinoma | 9.44e-07 | 2 |