FFCP PHASE1:Hg19::chr15:33446939..33446959,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr15:33446939..33446959,- to FFCP PHASE1:Hg19::chr15:33446939..33446959,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr15:33446939..33446959,- | |||
|coexpression_cluster_id=C897 | |||
|description=CAGE_peak_at_chr15:33446939..33446959,- | |||
|id=chr15:33446939..33446959,- | |||
|ontology_enrichment_celltype=CL:0002194!4.77e-30!63;CL:0000576!4.77e-30!63;CL:0000040!4.77e-30!63;CL:0000559!4.77e-30!63;CL:0002057!1.72e-28!42;CL:0002009!1.78e-28!65;CL:0000766!4.45e-27!76;CL:0000839!5.84e-26!70;CL:0000860!1.80e-25!45;CL:0000557!2.66e-25!71;CL:0000763!9.62e-14!112;CL:0000049!9.62e-14!112;CL:0000738!1.05e-10!140;CL:0002087!1.84e-10!119;CL:0002031!4.73e-08!124 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.89e-45;33!CL:0002057;2.89e-45;33!CL:0000473;8.68e-45;39!CL:0000234;8.68e-45;39!CL:0000576;5.16e-30;48!CL:0000766;2.28e-21;69!CL:0000235;5.69e-11;6!CL:0000148;2.23e-09;10!CL:0000763;7.06e-09;100!CL:0002087;4.19e-07;104!CL:0002619;4.99e-07;3!CL:0002567;5.38e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,4.11e-54,48;CL:0000234,4.11e-54,48;CL:0002194,1.32e-50,59;CL:0000576,1.32e-50,59;CL:0000040,1.32e-50,59;CL:0000559,1.32e-50,59;CL:0002009,1.80e-48,61;CL:0000860,1.39e-44,42;CL:0002057,1.39e-44,42;CL:0000766,1.69e-44,72;CL:0000839,1.05e-43,66;CL:0000557,7.73e-43,67;CL:0000763,7.19e-26,108;CL:0000049,7.19e-26,108;CL:0002087,2.08e-22,115;CL:0000738,1.75e-20,136;CL:0002031,9.66e-18,120;CL:0000037,9.13e-14,168;CL:0002032,1.13e-12,161;CL:0000837,1.13e-12,161;CL:0000988,2.38e-12,177;CL:0000235,5.26e-11,6;CL:0000148,2.26e-09,10;CL:0000541,2.26e-09,10;CL:0002619,4.97e-07,3;CL:0002567,5.46e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;5.05e-32;42!CL:0000049;4.68e-08;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!9.44e-28!115;UBERON:0002390!2.10e-25!102;UBERON:0003061!2.10e-25!102;UBERON:0001474!3.58e-23!86;UBERON:0002371!3.93e-23!80;UBERON:0002193!7.73e-23!112;UBERON:0004765!2.03e-20!101;UBERON:0001434!2.03e-20!101;UBERON:0002405!5.52e-19!115;UBERON:0000062!1.10e-12!511;UBERON:0001049!3.77e-12!57;UBERON:0005068!3.77e-12!57;UBERON:0006241!3.77e-12!57;UBERON:0007135!3.77e-12!57;UBERON:0002204!1.19e-11!167;UBERON:0003075!1.96e-11!86;UBERON:0007284!1.96e-11!86;UBERON:0000467!7.22e-11!625;UBERON:0000480!9.35e-11!626;UBERON:0002616!2.90e-10!59;UBERON:0002346!2.90e-10!90;UBERON:0003080!9.47e-10!42;UBERON:0000923!2.09e-09!604;UBERON:0005291!2.09e-09!604;UBERON:0006598!2.09e-09!604;UBERON:0002532!2.09e-09!604;UBERON:0002050!2.66e-09!605;UBERON:0005423!2.66e-09!605;UBERON:0000922!3.13e-09!612;UBERON:0002780!3.46e-09!41;UBERON:0001890!3.46e-09!41;UBERON:0006240!3.46e-09!41;UBERON:0000468!4.22e-09!659;UBERON:0003056!6.11e-09!61;UBERON:0000955!6.14e-09!69;UBERON:0006238!6.14e-09!69;UBERON:0002020!1.32e-08!34;UBERON:0003528!1.32e-08!34;UBERON:0001893!3.26e-08!34;UBERON:0002791!6.92e-08!33;UBERON:0005743!7.70e-08!86;UBERON:0001869!1.34e-07!32;UBERON:0001017!1.37e-07!82;UBERON:0000073!1.96e-07!94;UBERON:0001016!1.96e-07!94 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,7.17e-38,76;UBERON:0001474,1.54e-37,82;UBERON:0002390,1.92e-36,98;UBERON:0003061,1.92e-36,98;UBERON:0002405,1.91e-34,93;UBERON:0002193,4.27e-33,108;UBERON:0004765,7.49e-33,90;UBERON:0001434,4.59e-28,100;UBERON:0002204,2.36e-13,167;UBERON:0003081,3.07e-12,203 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738726348460727,0,0.313454721478088,0.286235987131057,0.273748850145768,0,0.0764134057479513,0,0,1.18009283054671,1.91914699048606,1.70297735647684,0,0,0,0,0,0,8.86392653651004,7.2196001089251,10.8505435357926,27.9894342799905,25.2637059494804,30.393916980834,2.61716829803216,3.40088349319928,8.00527401919793,3.95129362739664,7.81218987241469,10.2203102395384,3.16461631554365,4.61089271752381,6.3850202069918,5.5159308917859,13.5551783552603,13.5426486594342,2.82363509313907,6.82265375144614,7.64059847113288,5.50951006267625,9.30694178520671,16.6227652707751,0.659702600373432,3.78980949481101,5.11469700639233,6.67481248845743,9.07816359505824,13.7020894779026,5.27622197039161,6.25779502104242,6.5156653411535,4.84319602106695,14.362827803515,9.81033401066742,0,0,0.209658645508376,2.92054440980887,1.65194582125657,1.92870704036496,0.285012743741249,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.24203425192614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795285947051099,0,1.51255707462509,1.10864698731282,0.263504357079378,0.327447688744282,0,0,0,0.174129737299267,1.72845348674525,0,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0.570471821544449,0,0.117434498643765,0,0.140450806702248,0,0,0.103325781175765,0,0.494533858557114,0,0,0,0.250237039743928,0,0.877955241761676,0.30648779579902,0.751190294532984,0,0,0,0,0,0,0,0.18611685633159,0,0,0,0,0,0.355009592516614,0.10075209822764,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0,0,0,0.982827216677626,2.36315962672562,0,0,0.686271241194102,0,0,0,0,0,0,1.44331342025273,0.34779121492523,0,0,0,0,0,0,10.0948972495833,3.7440682422278,12.7822799568306,0,0,0,0,0,0,0,0,0,0.288239906833923,0,16.509452515964,30.1770856191039,22.2713149699089,20.5286935227246,13.676056529542,35.1401377677383,43.4456177598479,0,0,0,0,0,0,0,0,0.257207374262142,0,0,0,0,0,0,0,0,0,0,0,2.43247561282381,10.5473989200747,8.43335757932127,0,0,0,1.88215698667853,1.43833425785268,4.29746311775749,0,0.197030760201927,0,0.256686072559497,0,0,0,0,0,0.749007023947182,0,0,0,0.500170521059677,0,0,0,0,0,0.300946099727719,4.5481500811197,0,0,0,0,0,0,1.03384013061444,3.8828556147351,2.34800627167578,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0,2.16386124460217,0.27470839445503,1.07262349896764,0,0,0,0.870036464629098,0.154048617114644,0.307007349452259,0,0,0,0.0852266274161009,0.712256285173899,0,0,0,0,0,0.62962469366128,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0,0.235624804691373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0.0982490410131212,0,0,0,0,0,0,0,0,0,2.35359501941948,0,0,0,0,0.507447609232169,0.764637207142375,0,0.238231775457789,0.411362273086194,0,0,0.79312517629427,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307240764308458,0,0,0,0,0,0,0,0,0,4.39524537815682,0,0,1.70481688083848,0,0,0,1.9882952955326,0.984685914873589,0.556543525114529,0,0,0.597743964753209,1.10513566212459,0,2.55671706255387,0,0,0,0,0,0.789147245095469,2.3948309234694,0,0,0.278304294485554,0,0,0,2.17499872630438,0,0,0,0,0,0,0,0.844175070377856,1.52581736317083,0.331737779793674,0,0,0,0,0.384751292518985,3.53220373125704,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41532103205343,0.611030144933625,0,0,0,0.134802265961354,0,0.234264445725339,0,0,0,1.18375320854817,0,0.30607276163049,6.00272506470636,0,0,0,0,0,0,0.569219092059585,0,0,0,0,1.92199335066233,0,0,0,0,0.581934098930517,0,0.451961481561065,1.09633539717401,0.397429223405979,0.0633107959558787,0,0.320635281006135,0.213452994739353,0.19980960958213,0,0.114536596165916,0,0,0,0,0,0,0,2.31160471921215,0.600420288709789,1.9166753044879,0,0,0,2.23425921017803,0.687481272035051,3.58936512288407,0.798716001995964,1.71690419254628,1.33902874465124,0.739018197353989,0,0,0,0,0,0,0,0,1.22583065500418,0,0,0,0,0,0.364497339948148,0,1.57611414598396,0.367182116944987,0,0,0,0,0,0,0,0,0.653174720218818,0,0,0.681552087141687,0,0.439656701034247,0,0.775697738169303,1.3223260174269,0,0,1.9221734262185,3.45849471219265,0.414239055347196,4.46549419630756,0,0,0,0,0,0.612691153526923,0,0,0,0.366078794705889,2.253436752717,0,2.21858103073705,1.24192805882767,0,0,18.0462449874561,81.0721547267707,0,0,0,0,0,0,2.08343305802598,0.50313580350515,0,0,0,0,0,0,1.34940933649081,0,0,0,0,0,0,0,0.181848659202559,0,0,0,2.00013882331577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414775308455192,1.55888247071511,0.265729680626726,0.490696182767533,2.6208787907713,0,0,0,0,0,0,10.1258272638512,0,0,0,0.107824811396682,0,0,0,0,0,0,0,0,0,0,0,0.256916900385838,1.41696576325585,1.11743701340006,0,0.252071696221718,0.345786262321089,0.322951291263702,0,0,0,0,0,0,0,11.3382246606277,0.526472298444801,4.63921658018096,0,0,0,0,0.337687923091973,0,3.10030194751776,0.443910671357348,0,0,0.496211178389294,0,0,0,0.336283722218824,0.606965604236632,0.455324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| ||
|short_description=p@chr15:33446939..33446959,- | |||
}} | }} |
Latest revision as of 00:52, 25 July 2015
Short description: | p@chr15:33446939..33446959, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:33446939..33446959, - |
Coexpression cluster: | C897_melanoma_Melanocyte_CD14_Macrophage_retina_myxofibrosarcoma_Monocytederived |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 4.11e-54 | 48 |
phagocyte | 4.11e-54 | 48 |
monopoietic cell | 1.32e-50 | 59 |
monocyte | 1.32e-50 | 59 |
monoblast | 1.32e-50 | 59 |
promonocyte | 1.32e-50 | 59 |
macrophage dendritic cell progenitor | 1.80e-48 | 61 |
classical monocyte | 1.39e-44 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.39e-44 | 42 |
myeloid leukocyte | 1.69e-44 | 72 |
myeloid lineage restricted progenitor cell | 1.05e-43 | 66 |
granulocyte monocyte progenitor cell | 7.73e-43 | 67 |
myeloid cell | 7.19e-26 | 108 |
common myeloid progenitor | 7.19e-26 | 108 |
nongranular leukocyte | 2.08e-22 | 115 |
leukocyte | 1.75e-20 | 136 |
hematopoietic lineage restricted progenitor cell | 9.66e-18 | 120 |
hematopoietic stem cell | 9.13e-14 | 168 |
hematopoietic oligopotent progenitor cell | 1.13e-12 | 161 |
hematopoietic multipotent progenitor cell | 1.13e-12 | 161 |
hematopoietic cell | 2.38e-12 | 177 |
macrophage | 5.26e-11 | 6 |
melanocyte | 2.26e-09 | 10 |
melanoblast | 2.26e-09 | 10 |
adult endothelial progenitor cell | 4.97e-07 | 3 |
light melanocyte | 5.46e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 7.17e-38 | 76 |
bone element | 1.54e-37 | 82 |
hematopoietic system | 1.92e-36 | 98 |
blood island | 1.92e-36 | 98 |
immune system | 1.91e-34 | 93 |
hemolymphoid system | 4.27e-33 | 108 |
skeletal element | 7.49e-33 | 90 |
skeletal system | 4.59e-28 | 100 |
musculoskeletal system | 2.36e-13 | 167 |
lateral plate mesoderm | 3.07e-12 | 203 |