FFCP PHASE1:Hg19::chr15:33446964..33446978,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr15:33446964..33446978,- to FFCP PHASE1:Hg19::chr15:33446964..33446978,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr15:33446964..33446978,- | |||
|coexpression_cluster_id=C897 | |||
|description=CAGE_peak_at_chr15:33446964..33446978,- | |||
|id=chr15:33446964..33446978,- | |||
|ontology_enrichment_celltype=CL:0002057!1.86e-30!42;CL:0002194!1.05e-29!63;CL:0000576!1.05e-29!63;CL:0000040!1.05e-29!63;CL:0000559!1.05e-29!63;CL:0002009!3.02e-28!65;CL:0000860!1.95e-27!45;CL:0000766!1.62e-25!76;CL:0000839!5.61e-25!70;CL:0000557!2.21e-24!71;CL:0000763!2.69e-13!112;CL:0000049!2.69e-13!112;CL:0002087!3.36e-11!119;CL:0000738!4.07e-10!140;CL:0002031!2.22e-08!124 | |||
|ontology_enrichment_celltype_v019=CL:0000473;1.43e-60;39!CL:0000234;1.43e-60;39!CL:0000860;2.81e-59;33!CL:0002057;2.81e-59;33!CL:0000576;1.57e-40;48!CL:0000766;4.96e-29;69!CL:0000235;2.38e-16;6!CL:0000763;1.45e-12;100!CL:0000148;9.68e-11;10!CL:0002087;1.29e-10;104!CL:0002619;3.94e-10;3!CL:0000738;1.60e-08;136!CL:0000147;2.03e-07;14 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,1.90e-74,48;CL:0000234,1.90e-74,48;CL:0002194,1.28e-68,59;CL:0000576,1.28e-68,59;CL:0000040,1.28e-68,59;CL:0000559,1.28e-68,59;CL:0002009,4.93e-66,61;CL:0000839,3.02e-60,66;CL:0000766,4.93e-60,72;CL:0000860,7.75e-60,42;CL:0002057,7.75e-60,42;CL:0000557,3.42e-59,67;CL:0000763,2.61e-36,108;CL:0000049,2.61e-36,108;CL:0002087,1.99e-33,115;CL:0000738,1.64e-29,136;CL:0002031,2.63e-28,120;CL:0000037,1.11e-21,168;CL:0002032,1.13e-20,161;CL:0000837,1.13e-20,161;CL:0000988,5.36e-20,177;CL:0000235,2.39e-16,6;CL:0000148,9.55e-11,10;CL:0000541,9.55e-11,10;CL:0002619,4.07e-10,3;CL:0000219,6.28e-08,386;CL:0000147,2.01e-07,14 | |||
|ontology_enrichment_development_v019=CL:0002057;4.93e-44;42!CL:0000049;1.44e-11;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1909;3.86e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,3.39e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.37e-32!115;UBERON:0001474!7.13e-23!86;UBERON:0002371!8.39e-23!80;UBERON:0002390!1.62e-22!102;UBERON:0003061!1.62e-22!102;UBERON:0002193!1.82e-20!112;UBERON:0004765!2.39e-18!101;UBERON:0001434!2.39e-18!101;UBERON:0002405!1.50e-17!115;UBERON:0001049!6.74e-14!57;UBERON:0005068!6.74e-14!57;UBERON:0006241!6.74e-14!57;UBERON:0007135!6.74e-14!57;UBERON:0002616!1.17e-12!59;UBERON:0000062!1.27e-11!511;UBERON:0001017!2.10e-11!82;UBERON:0003075!2.20e-11!86;UBERON:0007284!2.20e-11!86;UBERON:0000955!2.26e-11!69;UBERON:0006238!2.26e-11!69;UBERON:0000073!2.34e-11!94;UBERON:0001016!2.34e-11!94;UBERON:0005743!3.66e-11!86;UBERON:0003080!1.72e-10!42;UBERON:0002346!2.58e-10!90;UBERON:0002780!8.95e-10!41;UBERON:0001890!8.95e-10!41;UBERON:0006240!8.95e-10!41;UBERON:0002204!1.58e-09!167;UBERON:0000467!5.18e-09!625;UBERON:0000480!6.34e-09!626;UBERON:0002020!4.53e-08!34;UBERON:0003528!4.53e-08!34;UBERON:0001893!9.54e-08!34;UBERON:0000468!1.02e-07!659;UBERON:0002298!1.42e-07!8;UBERON:0000922!1.47e-07!612;UBERON:0002050!1.88e-07!605;UBERON:0005423!1.88e-07!605;UBERON:0003056!2.45e-07!61;UBERON:0002791!2.65e-07!33;UBERON:0000923!3.57e-07!604;UBERON:0005291!3.57e-07!604;UBERON:0006598!3.57e-07!604;UBERON:0002532!3.57e-07!604;UBERON:0004121!4.05e-07!169 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,6.21e-51,76;UBERON:0001474,2.00e-46,82;UBERON:0002405,2.14e-46,93;UBERON:0002390,1.57e-45,98;UBERON:0003061,1.57e-45,98;UBERON:0002193,2.38e-42,108;UBERON:0004765,2.41e-41,90;UBERON:0001434,3.95e-36,100;UBERON:0003081,5.22e-18,203;UBERON:0002204,2.44e-17,167;UBERON:0000926,3.32e-08,315;UBERON:0004120,3.32e-08,315;UBERON:0006603,3.32e-08,315 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0,0,0,0.123121058076788,0,0,0,0,0,0,0,0,0.786728553697808,1.15148819429164,1.23852898652861,0,0,0,0,0,0,4.43196326825502,5.21415563422368,3.68918480216948,8.06095707263728,11.3362783106643,11.07574940827,1.01778767145695,3.77875943688809,1.21292030593908,4.18372266430232,4.52284676824008,4.02618282163635,0.575384784644301,3.84241059793651,1.89185783910868,4.48169384957604,8.39130088658974,6.77132432971709,1.69418105588344,4.63940455098338,2.02251136000576,3.36692281607993,4.49300637906531,1.91801137739712,0.989553900560148,1.59570926097305,1.27867425159808,7.2552309657146,2.8369261234557,4.9825779919646,2.00998932205395,4.17186334736161,1.73751075764093,1.81619850790011,7.36555271975129,5.37986058649504,0,0,0,1.34794357375794,0.750884464207532,0.64290234678832,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0.196709770113833,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795285947051099,0,0.378139268656271,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0.247266929278557,0,0,0,0,0,0,0.30648779579902,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10075209822764,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0.171567810298526,0.109750285408626,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,6.89407617044712,1.8720341211139,4.16167254408439,0,0,0,0,0,0,0,0,0,0,0,6.47678521780124,8.78573378784039,15.2382681373061,0,7.91771693815591,13.8157806608202,28.8684696956884,0,0,0,0,0,0,0,0,0,0,0.266422179016099,0,0,0,0,0,0,0,0,0,1.2162378064119,5.02257091432126,2.10833939483032,0,0,0,0.289562613335158,0.205476322550383,0.716243852959582,0,0,0,0.128343036279748,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,1.2942852049117,1.17400313583789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.9273691048295,0.183138929636687,0.165018999841176,0,0,0,0.096670718292122,0,0,0,0,0,0,0,0,0,0,0,0,0,0.6970372701606,0,0,0,0,0,0,0.316379424718726,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.659006605437454,0,0,0,0,0,0,0,0.238231775457789,0,0,0,0.79312517629427,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.93016358543788,0,0,0.568272293612826,0,0,0,0.994147647766298,0.281338832821026,0,0,0,0.597743964753209,0.276283915531148,0,0.306806047506464,0,0,0,0,0,0.493217028184668,0,0,0,0.278304294485554,0,0,0,2.17499872630438,0,0,0,0,0,0,0,0.241192877250816,0,0.442317039724898,0,0.219385397153973,0,0,0.230850775511391,0.341826167541004,0,0,0,0,0.183195186803725,1.5991043280559,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265372693510018,0.611030144933625,0,0,0,0.202203398942031,0,0,0,0,0,0.394584402849391,0,0,2.21153028699708,0,0,0,0,0,0,0.284609546029793,0,0,0,0,1.04836000945218,0,0,0,0,0.0969890164884194,0,0.451961481561065,0.411125773940253,0.397429223405979,0,0,0.240476460754601,0.213452994739353,0,0,0,0,0,0,0,0,0,0,2.60055530911367,1.20084057741958,1.23214841002794,0,0,0,0.279282401272254,0.229160424011684,2.15361907373044,0.199679000498991,0.429226048136571,1.33902874465124,0.268733889946905,0,0,0,0,0,0,0,0.795229689809303,0.681017030557878,0,0,0,0,0,0,0,0.315222829196793,0.157363764404994,0,0,0,0,0.662091970365432,0,0,0,0,0,0,0.170388021785422,0,0.293104467356165,0,0.904980694530854,0.66116300871345,0,0,1.70859860108311,0.314408610199332,0.828478110694391,1.9846640872478,0,0,0,0.544017803369474,0,0,0,0,0.886068179966986,0.244052529803926,0.3755727921195,1.14681839138014,0.887432412294818,0.248385611765534,0,0,4.85277176133273,29.9738600222216,0,0,0,0,0,0,0.568209015825267,0.251567901752575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400027764663154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0.974301544196942,0,0.327130788511688,0.982829546539238,0,0,0,0,0,0,4.0503309055405,0,0.622077260032973,0,0.107824811396682,0,0.109209638192014,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0.319267718114302,0.205116364240755,0,0.207471757392654,0,0,0,0,0,0,0,0,0.795664888465099,0.225630985047772,0.60511520611056,0,0,0,0,0.270150338473579,0,0.826747186004736,0.19024743058172,0,0.548257766857182,0,0,0,0,0.336283722218824,1.21393120847326,0.227662191351298,0,0,0,0.135939465953663,0.131545547125698,0,0,0.235479278551542,0.471346769748006,0,0,0,0,3.00201485541957,0,0,0,0,0,0,0,0,0.591660003652827,0.511280428554946,0,0,0,0,0,0,0,0,0.410651227424988,0,0.485710993059139,0,0,0,0,0.109940516745429,0,0.231522474323834,0.218559560503957,0,0.490296643507811,0,2.74831853960923,0.594092800654172,0,0,1.2217909337381,1.35361564744512,0,0,0,0,0.730336388246517,0,1.86341458096887,0,0.135982980381829,0,0,0,0,0,0,0,0,0,0,0,0,0.530450887527676,0,1.65833887891756,1.03432995861895,0.213233981900981,0,0.258355639344024,0.682821857254437,0,0.445530107947154,0,0.217716747896961,0,0.06735205301458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| ||
|short_description=p@chr15:33446964..33446978,- | |||
}} | }} |
Latest revision as of 00:52, 25 July 2015
Short description: | p@chr15:33446964..33446978, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:33446964..33446978, - |
Coexpression cluster: | C897_melanoma_Melanocyte_CD14_Macrophage_retina_myxofibrosarcoma_Monocytederived |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 1.90e-74 | 48 |
phagocyte | 1.90e-74 | 48 |
monopoietic cell | 1.28e-68 | 59 |
monocyte | 1.28e-68 | 59 |
monoblast | 1.28e-68 | 59 |
promonocyte | 1.28e-68 | 59 |
macrophage dendritic cell progenitor | 4.93e-66 | 61 |
myeloid lineage restricted progenitor cell | 3.02e-60 | 66 |
myeloid leukocyte | 4.93e-60 | 72 |
classical monocyte | 7.75e-60 | 42 |
CD14-positive, CD16-negative classical monocyte | 7.75e-60 | 42 |
granulocyte monocyte progenitor cell | 3.42e-59 | 67 |
myeloid cell | 2.61e-36 | 108 |
common myeloid progenitor | 2.61e-36 | 108 |
nongranular leukocyte | 1.99e-33 | 115 |
leukocyte | 1.64e-29 | 136 |
hematopoietic lineage restricted progenitor cell | 2.63e-28 | 120 |
hematopoietic stem cell | 1.11e-21 | 168 |
hematopoietic oligopotent progenitor cell | 1.13e-20 | 161 |
hematopoietic multipotent progenitor cell | 1.13e-20 | 161 |
hematopoietic cell | 5.36e-20 | 177 |
macrophage | 2.39e-16 | 6 |
melanocyte | 9.55e-11 | 10 |
melanoblast | 9.55e-11 | 10 |
adult endothelial progenitor cell | 4.07e-10 | 3 |
motile cell | 6.28e-08 | 386 |
pigment cell | 2.01e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 6.21e-51 | 76 |
bone element | 2.00e-46 | 82 |
immune system | 2.14e-46 | 93 |
hematopoietic system | 1.57e-45 | 98 |
blood island | 1.57e-45 | 98 |
hemolymphoid system | 2.38e-42 | 108 |
skeletal element | 2.41e-41 | 90 |
skeletal system | 3.95e-36 | 100 |
lateral plate mesoderm | 5.22e-18 | 203 |
musculoskeletal system | 2.44e-17 | 167 |
mesoderm | 3.32e-08 | 315 |
mesoderm-derived structure | 3.32e-08 | 315 |
presumptive mesoderm | 3.32e-08 | 315 |
Ontology term | p-value | n |
---|---|---|
melanoma | 3.39e-07 | 2 |