FFCP PHASE1:Hg19::chr16:10971077..10971090,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr16:10971077..10971090,+ to FFCP PHASE1:Hg19::chr16:10971077..10971090,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4261 | |EntrezGene=4261 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7067 | |HGNC=7067 | ||
|TSSclassifier=strong | |||
|UniProt=F2Z2G8 | |UniProt=F2Z2G8 | ||
|association_with_transcript=4bp_to_ENST00000388910_5end | |||
|cluster_id=chr16:10971077..10971090,+ | |||
|coexpression_cluster_id=C1207 | |||
|description=CAGE_peak_2_at_CIITA_5end | |||
|id=chr16:10971077..10971090,+ | |||
|ontology_enrichment_celltype=CL:0000037!3.08e-47!172;CL:0000566!3.08e-47!172;CL:0000738!6.93e-46!140;CL:0000988!1.09e-45!182;CL:0002087!4.34e-45!119;CL:0002032!1.30e-43!165;CL:0000837!1.30e-43!165;CL:0002031!5.34e-40!124;CL:0002009!3.99e-27!65;CL:0002194!1.79e-25!63;CL:0000576!1.79e-25!63;CL:0000040!1.79e-25!63;CL:0000559!1.79e-25!63;CL:0000763!4.25e-25!112;CL:0000049!4.25e-25!112;CL:0000557!4.36e-25!71;CL:0002057!6.79e-24!42;CL:0000839!2.01e-21!70;CL:0000860!3.97e-21!45;CL:0000766!4.22e-21!76;CL:0000945!2.44e-19!24;CL:0000826!2.44e-19!24;CL:0000542!8.24e-17!53;CL:0000051!8.24e-17!53;CL:0000838!3.43e-16!52;CL:0000236!3.66e-13!14;CL:0000451!1.24e-10!10;CL:0000990!2.71e-09!8 | |||
|ontology_enrichment_celltype_v019=CL:0000945;3.82e-25;24!CL:0000236;5.54e-17;13!CL:0000473;6.93e-17;39!CL:0000234;6.93e-17;39!CL:0000860;8.51e-15;33!CL:0002057;8.51e-15;33!CL:0000451;2.40e-14;10!CL:0000576;5.36e-14;48!CL:0000990;1.95e-12;8!CL:0002087;2.53e-12;104!CL:0000738;8.72e-12;136!CL:0000766;3.43e-10;69!CL:0000542;6.34e-10;53!CL:0000988;9.80e-09;177!CL:0000840;1.60e-08;5!CL:0000763;2.57e-08;100!CL:0000453;4.69e-08;5!CL:0000235;4.37e-07;6!CL:0002393;5.42e-07;6!CL:0002397;5.42e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,4.12e-52,177;CL:0000037,4.61e-52,168;CL:0000738,2.30e-49,136;CL:0002032,3.84e-47,161;CL:0000837,3.84e-47,161;CL:0002087,2.77e-46,115;CL:0002031,1.03e-40,120;CL:0002009,2.73e-31,61;CL:0000763,1.81e-30,108;CL:0000049,1.81e-30,108;CL:0002194,4.68e-29,59;CL:0000576,4.68e-29,59;CL:0000040,4.68e-29,59;CL:0000559,4.68e-29,59;CL:0000557,8.67e-29,67;CL:0000473,2.01e-28,48;CL:0000234,2.01e-28,48;CL:0000945,3.67e-25,24;CL:0000826,3.67e-25,24;CL:0000766,1.34e-24,72;CL:0000839,2.38e-24,66;CL:0000860,4.86e-23,42;CL:0002057,4.86e-23,42;CL:0000236,6.37e-18,14;CL:0000542,1.24e-14,53;CL:0000051,1.24e-14,53;CL:0000451,2.35e-14,10;CL:0000838,6.91e-14,52;CL:0000990,1.83e-12,8;CL:0002393,1.12e-08,9;CL:0002397,1.12e-08,9;CL:0000134,1.40e-08,354;CL:0000840,1.49e-08,5;CL:0001029,1.49e-08,5;CL:0000453,4.73e-08,5;CL:0002320,6.13e-08,361;CL:0000219,1.69e-07,386;CL:0000235,4.40e-07,6 | |||
|ontology_enrichment_development_v019=CL:0002057;9.84e-17;42!CL:0000051;6.34e-10;53!CL:0000049;1.58e-08;108 | |||
|ontology_enrichment_disease=DOID:0060058!7.41e-07!10 | |||
|ontology_enrichment_disease_v019=DOID:0060058;2.50e-09;10 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,2.58e-09,10;DOID:2531,3.43e-07,51;DOID:0060083,3.43e-07,51 | |||
|ontology_enrichment_uberon=UBERON:0002390!3.83e-36!102;UBERON:0003061!3.83e-36!102;UBERON:0002193!2.09e-32!112;UBERON:0007023!1.13e-30!115;UBERON:0002371!1.54e-23!80;UBERON:0001474!3.34e-20!86;UBERON:0002405!5.33e-17!115;UBERON:0004765!2.01e-15!101;UBERON:0001434!2.01e-15!101;UBERON:0001049!1.09e-13!57;UBERON:0005068!1.09e-13!57;UBERON:0006241!1.09e-13!57;UBERON:0007135!1.09e-13!57;UBERON:0000178!5.69e-12!15;UBERON:0000179!5.69e-12!15;UBERON:0000463!5.69e-12!15;UBERON:0002780!4.81e-11!41;UBERON:0001890!4.81e-11!41;UBERON:0006240!4.81e-11!41;UBERON:0002616!6.06e-11!59;UBERON:0003080!1.60e-10!42;UBERON:0001893!7.36e-09!34;UBERON:0002020!8.96e-09!34;UBERON:0003528!8.96e-09!34;UBERON:0002791!1.33e-08!33;UBERON:0000955!3.71e-08!69;UBERON:0006238!3.71e-08!69;UBERON:0001869!7.26e-08!32;UBERON:0003075!8.21e-08!86;UBERON:0007284!8.21e-08!86;UBERON:0001017!2.15e-07!82;UBERON:0003081!2.63e-07!216;UBERON:0005743!6.34e-07!86;UBERON:0002346!7.34e-07!90 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.46e-16;15!UBERON:0000179;3.46e-16;15!UBERON:0000463;3.46e-16;15!UBERON:0002390;1.11e-13;32!UBERON:0002193;5.62e-08;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.81e-42,98;UBERON:0003061,1.81e-42,98;UBERON:0002193,2.54e-39,108;UBERON:0002405,2.53e-26,93;UBERON:0002371,4.77e-26,76;UBERON:0001474,6.54e-23,82;UBERON:0004765,2.04e-19,90;UBERON:0000178,3.06e-16,15;UBERON:0000179,3.06e-16,15;UBERON:0000463,3.06e-16,15;UBERON:0001434,6.79e-16,100;UBERON:0007023,1.48e-15,114;UBERON:0003081,5.64e-13,203;UBERON:0002384,8.99e-08,371;UBERON:0001049,3.29e-07,56;UBERON:0005068,3.29e-07,56;UBERON:0006241,3.29e-07,56;UBERON:0007135,3.29e-07,56 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.93987385845721,0.204000691244253,7.8363680369522,5.72471974262113,1.91624195102038,2.00868223351684,6.18948586558405,7.63535481884495,9.36658297632783,2.36018566109342,1.53531759238885,5.10893206943051,0,0,0,6.35231044758473,11.5157078314811,8.51441274071057,3.87796785972314,2.80762226458198,5.64228263861215,0.895661896959697,1.6194683300949,3.09090681161024,2.4717700592526,3.02300754951048,3.15359279544161,0.232429036905685,0.411167888021826,2.78735733805593,38.5507805711682,45.5966057621799,26.7224919774101,2.41321976515633,1.29096936716765,2.70852973188684,1.69418105588344,0.545812300115692,0.898893937780338,0.612167784741805,1.92557416245656,1.91801137739712,55.0851671311816,60.4374882593545,55.4092175692502,0.870627715885752,1.70215567407342,0.622822248995575,30.9035858265794,41.7186334736161,29.1033051904856,2.42159801053347,1.84138817993782,0.949387162322653,7.6051903072299,7.22854619881148,7.33805259279316,10.446562696624,8.25972910628285,6.42902346788321,1.99508920618874,1.79025009479181,1.27864907635244,33.4392864476513,36.0451483433007,47.1439904547684,23.4701622411579,26.0257391573408,33.9103939573145,32.3911987664582,24.8053976179195,50.0907412816315,36.9959429303691,32.8754976187697,9.25199300053181,3.92355994087075,8.16490662802739,0.196709770113833,0,0.205601498999509,0.334372990781356,0,0,1.94826728407911,0.334231370655521,0,0.221533894583621,0.541607727530031,0.128091319725675,0.910415432919148,0,0.829050053357545,0,0,0,0,0.453237370790265,0,0,0,0.637130828648193,0.651083453856419,0,1.05402583354441,1.15187950038977,0,0.947109008176067,0,0.604820229674197,0.267440195783507,0.434473211648397,0,0,0,0,0,0,0,0,0,0,0,1.57174890597255,0,0,12.6573483525327,16.0199358315326,7.97747763113191,12.1630218395724,5.14795419702115,8.54352253057999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.570471821544449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30648779579902,0,0,0,0,0,0,0,0,0,0,0,0.252433774244115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,7.87894419479671,1.63802985597466,9.21513206190115,0,0,0,0,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.29742683847143,3.51579964002488,12.6500363689819,0,0,0,0,0,0,0.112085143993527,0.788123040807709,0.862510299438069,1.92514554419623,0.76228387266739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368738337083406,0.0868836144680828,0,0,6.6165768359324,3.66714141391649,5.65656056358255,0,0,0,0,0,0,0,0,0,0,0,0.355123450626254,0.328508624055237,0,0.348631135379878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0.193341436584244,0,0,0,0.107420244868274,0,0.255679882248303,0,0,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0.659006605437454,0,0,0,0,4.05958087385735,12.234195314278,5.69647187174163,7.62341681464925,10.2840568271549,2.59389324477087,6.48037724685738,7.9312517629427,0,0,0,6.87471747965159,7.93480671370447,0,0,5.38864302868605,6.70268795463284,3.17510374085824,0.649243880549111,4.21195767170188,3.87998954356427,0,0,1.69291777801603,2.24823305145179,4.237793851012,2.98092366383228,1.71752672377882,0,0,0,1.75849285861836,0,0,0,0,1.4098700508785,0,2.19762268907841,0,19.6140356328362,0.852408440419239,0.23874448473769,0.296964680832639,0,0.994147647766298,2.11004124615769,0,5.27372397525631,0,2.59022384726391,14.6430475231508,0,0,9.47753002050235,0,0.0898683511473268,0,1.02314474045374,0.789147245095469,7.18449277040819,2.22273980289274,0,1.02044907978036,0,0,0,0,0.1137934482855,0,0,0,0,0,1.77148277162768,1.08536794762867,0,0.221158519862449,0,0.219385397153973,0,0,1.15425387755696,0,0,0,0,0,0,0,0,0,0.332423363800313,0,0,0,0,0,0,0,0,0,0.995261931078505,0.353830258013357,1.22206028986725,9.4886761177799,14.4569808567408,17.3340436179056,4.44847477672468,0.802577647298789,1.1713222286267,6.93328199019531,0,0.728341138602278,0.394584402849391,2.41981432097328,0.61214552326098,3.53844845919533,0,0,0,0,0,0,0,0.277349346026277,0,0,0,2.97035336011451,0,0,0,0,0.581934098930517,0,0.225980740780532,0.137041924646751,0.397429223405979,0.569797163602908,0,0,0.85381197895741,0.39961921916426,0,0,0,2.16082196982225,0,0.942776138467182,0,0,0.101998217636322,0,3.00210144354895,3.28572909340783,77.9254187208531,0.429765441419957,5.25774708558629,1.39641200636127,1.14580212005842,2.87149209830726,0.399358000997982,0,0.223171457441873,0.403100834920358,0,0,0,0,0,0,3.64095327882873,0,1.0896272488926,0,0,0,42.7450393947851,34.0472860005498,0.91124334987037,0,0.551639951094387,0.157363764404994,0,0,0,0.714695326373367,0.662091970365432,0,0,0,0,0,0.328370082997356,0,0,0.146552233678082,1.32506888912221,1.55139547633861,1.05786081394152,0,0,2.13574825135389,0.628817220398664,2.48543433208317,6.45015828355536,0.988058159489721,7.55114109961555,0,0.544017803369474,0,0.612691153526923,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| ||
|short_description=p2@CIITA | |||
}} | }} |
Latest revision as of 04:59, 20 September 2015
Short description: | p2@CIITA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CIITA_5end |
Coexpression cluster: | C1207_migratory_granulocyte_CD19_CD14_immature_adult_Dendritic |
Association with transcript: | 4bp_to_ENST00000388910_5end |
EntrezGene: | CIITA |
HGNC: | 7067 |
UniProt: | F2Z2G8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.81e-42 | 98 |
blood island | 1.81e-42 | 98 |
hemolymphoid system | 2.54e-39 | 108 |
immune system | 2.53e-26 | 93 |
bone marrow | 4.77e-26 | 76 |
bone element | 6.54e-23 | 82 |
skeletal element | 2.04e-19 | 90 |
blood | 3.06e-16 | 15 |
haemolymphatic fluid | 3.06e-16 | 15 |
organism substance | 3.06e-16 | 15 |
skeletal system | 6.79e-16 | 100 |
adult organism | 1.48e-15 | 114 |
lateral plate mesoderm | 5.64e-13 | 203 |
connective tissue | 8.99e-08 | 371 |
neural tube | 3.29e-07 | 56 |
neural rod | 3.29e-07 | 56 |
future spinal cord | 3.29e-07 | 56 |
neural keel | 3.29e-07 | 56 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 2.58e-09 | 10 |
hematologic cancer | 3.43e-07 | 51 |
immune system cancer | 3.43e-07 | 51 |