FFCP PHASE1:Hg19::chr17:40440446..40440464,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr17:40440446..40440464,+ to FFCP PHASE1:Hg19::chr17:40440446..40440464,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6776 | |EntrezGene=6776 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11366 | |HGNC=11366 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-42bp_to_ENST00000469124_5end | |||
|cluster_id=chr17:40440446..40440464,+ | |||
|description=CAGE_peak_5_at_STAT5A_5end | |||
|id=chr17:40440446..40440464,+ | |||
|ontology_enrichment_celltype=CL:0000988!2.40e-36!182;CL:0000037!8.85e-34!172;CL:0000566!8.85e-34!172;CL:0002032!1.08e-33!165;CL:0000837!1.08e-33!165;CL:0000763!3.74e-33!112;CL:0000049!3.74e-33!112;CL:0000738!1.61e-22!140;CL:0000766!3.29e-22!76;CL:0002087!1.18e-20!119;CL:0002031!3.39e-20!124;CL:0000839!4.68e-20!70;CL:0002009!1.04e-19!65;CL:0002194!1.04e-19!63;CL:0000576!1.04e-19!63;CL:0000040!1.04e-19!63;CL:0000559!1.04e-19!63;CL:0000557!8.26e-19!71;CL:0000860!7.12e-18!45;CL:0002057!1.79e-16!42;CL:0002320!1.96e-09!365;CL:0000134!8.58e-09!358;CL:0000219!1.16e-07!390;CL:0000136!6.73e-07!15 | |||
|ontology_enrichment_celltype_v019=CL:0000473;8.85e-15;39!CL:0000234;8.85e-15;39!CL:0000860;4.84e-14;33!CL:0002057;4.84e-14;33!CL:0000136;3.90e-12;13!CL:0000763;1.65e-11;100!CL:0000988;1.22e-08;177!CL:0000576;4.89e-08;48!CL:0000766;1.52e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,1.80e-37,177;CL:0002032,8.63e-34,161;CL:0000837,8.63e-34,161;CL:0000037,6.97e-33,168;CL:0000763,1.76e-32,108;CL:0000049,1.76e-32,108;CL:0000738,8.63e-18,136;CL:0000766,1.73e-17,72;CL:0002009,3.18e-17,61;CL:0002087,6.37e-17,115;CL:0002031,6.42e-17,120;CL:0002194,1.97e-16,59;CL:0000576,1.97e-16,59;CL:0000040,1.97e-16,59;CL:0000559,1.97e-16,59;CL:0000473,8.90e-16,48;CL:0000234,8.90e-16,48;CL:0000557,5.27e-15,67;CL:0002320,9.39e-15,361;CL:0000134,4.38e-14,354;CL:0000839,6.32e-14,66;CL:0000860,2.13e-12,42;CL:0002057,2.13e-12,42;CL:0000219,2.61e-12,386;CL:0000136,3.10e-10,15;CL:0000034,9.78e-10,441;CL:0000048,5.25e-09,427;CL:0000723,1.25e-08,433 | |||
|ontology_enrichment_development_v019=CL:0000049;1.70e-10;108!CL:0002057;1.17e-08;42 | |||
|ontology_enrichment_disease=DOID:8692!5.37e-09!31;DOID:1240!3.99e-08!39;DOID:2531!3.62e-07!51;DOID:0060083!3.62e-07!51 | |||
|ontology_enrichment_disease_v019=DOID:8692;2.07e-16;31!DOID:1240;4.21e-12;39!DOID:1036;6.38e-12;8!DOID:2531;4.68e-11;51!DOID:0060083;4.68e-11;51 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,9.88e-17,31;DOID:2531,2.48e-16,51;DOID:0060083,2.48e-16,51;DOID:1240,1.63e-15,39;DOID:1036,8.48e-12,8 | |||
|ontology_enrichment_uberon=UBERON:0002390!1.27e-17!102;UBERON:0003061!1.27e-17!102;UBERON:0002193!1.94e-17!112;UBERON:0002371!5.90e-15!80;UBERON:0001474!2.47e-12!86;UBERON:0002405!5.43e-11!115;UBERON:0004765!1.02e-09!101;UBERON:0001434!1.02e-09!101;UBERON:0002384!7.78e-09!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.50e-14,371;UBERON:0002390,1.26e-13,98;UBERON:0003061,1.26e-13,98;UBERON:0002371,2.09e-13,76;UBERON:0001474,7.13e-12,82;UBERON:0002193,1.53e-11,108;UBERON:0002405,2.63e-11,93;UBERON:0004765,5.26e-11,90;UBERON:0001434,3.69e-09,100 | |||
|phase1_expression=0.181678379270557,1.71280419112787,0.986680828671798,2.00146596706261,3.12872766099101,0,2.53299878168311,0.631719873426831,5.22371256399677,0,1.39560233594486,0,0,0.37129905888014,0,0.672325146451775,0,0,0,0.123121058076788,0.204000691244253,0,0,0,0,1.45185470921107,1.55991119954897,0.629686250509434,0.786728553697808,0.383829398097213,0.309632246632152,0,0,0,0,0,1.17440175733939,2.76997704265939,0.401088894940283,0.434021741431704,0.671746422719773,1.6194683300949,1.28787783817093,0.436194716338694,1.13362783106643,0.970336244751265,1.39457422143411,1.23350366406548,3.09706370895104,0.863077176966451,0.256160706529101,0,0.689491361473237,3.22742341791913,2.70852973188684,0.752969358170419,0.545812300115692,0.898893937780338,1.53041946185451,2.24650318953266,1.91801137739712,0.989553900560148,0.797854630486527,1.70489900213078,8.41606792022894,7.94339314567596,9.34233373493363,1.00499466102697,2.08593167368081,0,7.87019353423379,2.94622108790052,4.43047342417238,0.211255286311942,0,0.419317291016752,0.112328631146495,0.300353785683013,0.64290234678832,0.285012743741249,0.79566670879636,0.182664153764634,0,0,0,0.426730222566507,0,0,0,0,0,1.76171156811282,0.382273228125229,1.32171328579026,6.72610275577843,2.37045676297569,0.590129310341499,0.393010762749165,1.23360899399706,0.167186495390678,0.651844533267181,0.473447805734733,0,0.222820913770347,0,0.221533894583621,0.270803863765016,0,0.130059347559878,0.328875809207352,1.10540007114339,0,1.03800594213442,0.267540828089713,0,0.339928028092699,0.766440987203842,0,0.506039384039006,0,0,0,0.301150238155546,0.639933055772092,0,0.236777252044017,0,2.21767417547206,1.87208137048455,0.724122019413995,2.43806866313962,0,0,0,0.50133791063589,0.289693037921647,0,0,0,0,0,0.130979075497713,0,0,1.29818957461873,0.348259474598534,1.59549552622638,0.238490624305342,0,0,0,0,0,0,0.419499436209906,0,0,0,0,0,0,0,0,0.367663080345869,0,0,0,0,0,0,0.183201743930407,5.27121669744253,7.75560528296651,0,0,0,0.132409180813219,0,0,0,1.06748995729705,0,0,0,0,0.302714855289863,0,0.234321431833797,0,0,0.149448680551801,0,0,0,0,0,0.103325781175765,0,0.494533858557114,0.910161361938026,0.718618141816238,0,0,0,0,0,0.150238058906597,0.113432183160021,0,0,0.211931901159562,0.600182192168805,0.103052529238439,0,0.18611685633159,0,0.194874010322397,0,0,0,0,0,0.169560592310488,0,0.272746120590835,0,0.243947412259191,0.265059536642971,0.464775771478074,0,0,0.36497735907583,0,0,0,1.39310378409594,2.88751792667834,0.118306800039844,0.674338760312407,0.482022059766964,0.330881918197182,0,0.237270619111097,0.404493924480493,0.392442930250692,0.38474715694639,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0.117408694235822,0.144366447761074,0.462985512576611,0.380508304469197,0,0,1.47730203652438,0.234004265139238,0.297262324577456,0,0,0.141775097242386,0,0,0,0,0.176096868026452,0.207328115540772,0.288239906833923,0.25248486685276,0.190493682876507,0.381988425558278,1.17217447210047,0,0.308482478109971,0.300343057843917,1.14330573052231,0.112131084345361,0,0.07333828582095,0,3.57656445851882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,3.64871341923571,1.00451418286425,2.10833939483032,0,1.14861935834114,0,0.289562613335158,0.205476322550383,0,1.00876629594175,0.591092280605782,2.58753089831421,0.641715181398742,0,0,0,0,0,2.24702107184155,0,2.07207756718018,0.24538298343828,1.00034104211935,0.271265023699736,0.207970861530807,0,0.157702415033935,0,0.902838299183157,0,0,0,0,0.173767228936166,2.54541504701563,0,0.206768026122887,0.862856803274467,0.853820462427555,0,0,0,0,0,0,0.256278298511402,0,0,0,0,0,0,0,0,0,0,0,0,0,0.262248829918848,0.451199612907412,0,0,1.46139224653261,0,0,0,0,0,0.541892875087706,0.501689773854853,0,0,0,0.438519753291869,0.522870902049801,0,0,0,0.412164046590889,0,0,0,0.650060246036521,1.6068392984416,0.096670718292122,0.462145851343933,0,0,0.107420244868274,0.145016693914229,0.0852266274161009,0.356128142586949,0,0,0,0,0,0,0,0.308033580176089,0,0,0,0.143124886741991,0,0,0.38126038784765,0.255897791311334,0.42793898803392,0,0,0.179872457583315,0.274537029736055,0.235624804691373,0,0,0.421258456238981,0,0,0,0,0,0,0.551365343546124,0,0.438450885253763,0,0,0,0,0,0,0,0,0,0.422215270595328,0.658589785919804,0,0.349934720244983,0,0.670302275535787,0,0.0941438007767792,0,0,0,0,0,0.764637207142375,0,0.476463550915578,0.411362273086194,0,0,0,0,0,0,0.557409525377156,0,0,0,2.99369057149225,0.5745161103971,1.05836791361941,1.62310970137278,0.561594356226918,0.228234679033192,0,2.50634477090067,3.04725200042886,0,0,0.425846237690326,0.343505344755765,0,0,0,0.586164286206121,4.73290495621912,3.69262196843137,2.16364542780786,1.6653598399891,4.22961015263549,0.37428108081644,3.36968812325356,0,0.111443384277478,0,0,0,0,0,0,0,2.96646973608167,0,0,0,0,0,2.09244169283818,0,0,0,0,0.0986434056369336,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0.173624994933292,0,0.120596438625408,0,0,0,0,0.21787692703798,0.278847488557207,0.384751292518985,0,0,0,0,0,0,0,0,1.09886179476517,3.8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| 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| ||
|short_description=p5@STAT5A | |||
}} | }} |
Latest revision as of 14:10, 24 September 2015
Short description: | p5@STAT5A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_STAT5A_5end |
Coexpression cluster: | NA |
Association with transcript: | -42bp_to_ENST00000469124_5end |
EntrezGene: | STAT5A |
HGNC: | 11366 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 1.80e-37 | 177 |
hematopoietic oligopotent progenitor cell | 8.63e-34 | 161 |
hematopoietic multipotent progenitor cell | 8.63e-34 | 161 |
hematopoietic stem cell | 6.97e-33 | 168 |
myeloid cell | 1.76e-32 | 108 |
common myeloid progenitor | 1.76e-32 | 108 |
leukocyte | 8.63e-18 | 136 |
myeloid leukocyte | 1.73e-17 | 72 |
macrophage dendritic cell progenitor | 3.18e-17 | 61 |
nongranular leukocyte | 6.37e-17 | 115 |
hematopoietic lineage restricted progenitor cell | 6.42e-17 | 120 |
monopoietic cell | 1.97e-16 | 59 |
monocyte | 1.97e-16 | 59 |
monoblast | 1.97e-16 | 59 |
promonocyte | 1.97e-16 | 59 |
defensive cell | 8.90e-16 | 48 |
phagocyte | 8.90e-16 | 48 |
granulocyte monocyte progenitor cell | 5.27e-15 | 67 |
connective tissue cell | 9.39e-15 | 361 |
mesenchymal cell | 4.38e-14 | 354 |
myeloid lineage restricted progenitor cell | 6.32e-14 | 66 |
classical monocyte | 2.13e-12 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.13e-12 | 42 |
motile cell | 2.61e-12 | 386 |
fat cell | 3.10e-10 | 15 |
stem cell | 9.78e-10 | 441 |
multi fate stem cell | 5.25e-09 | 427 |
somatic stem cell | 1.25e-08 | 433 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 1.50e-14 | 371 |
hematopoietic system | 1.26e-13 | 98 |
blood island | 1.26e-13 | 98 |
bone marrow | 2.09e-13 | 76 |
bone element | 7.13e-12 | 82 |
hemolymphoid system | 1.53e-11 | 108 |
immune system | 2.63e-11 | 93 |
skeletal element | 5.26e-11 | 90 |
skeletal system | 3.69e-09 | 100 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 9.88e-17 | 31 |
hematologic cancer | 2.48e-16 | 51 |
immune system cancer | 2.48e-16 | 51 |
leukemia | 1.63e-15 | 39 |
chronic leukemia | 8.48e-12 | 8 |