FFCP PHASE1:Hg19::chr17:76124788..76124804,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr17:76124788..76124804,- to FFCP PHASE1:Hg19::chr17:76124788..76124804,-: NSchange) |
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(10 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=11322 | |EntrezGene=11322 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18021 | |HGNC=18021 | ||
|TSSclassifier=strong | |||
|UniProt=Q7L2M4 | |UniProt=Q7L2M4 | ||
|association_with_transcript=48bp_to_uc010dhf.1_5end | |||
|cluster_id=chr17:76124788..76124804,- | |||
|coexpression_cluster_id=C3690 | |||
|description=CAGE_peak_3_at_TMC6_5end | |||
|id=chr17:76124788..76124804,- | |||
|ontology_enrichment_celltype=CL:0000037!1.89e-51!172;CL:0000566!1.89e-51!172;CL:0002032!3.19e-50!165;CL:0000837!3.19e-50!165;CL:0000988!3.90e-49!182;CL:0000738!2.09e-41!140;CL:0002087!1.44e-35!119;CL:0002031!5.35e-35!124;CL:0000763!2.17e-34!112;CL:0000049!2.17e-34!112;CL:0000766!9.18e-26!76;CL:0000839!8.39e-22!70;CL:0000557!7.88e-21!71;CL:0002194!4.83e-20!63;CL:0000576!4.83e-20!63;CL:0000040!4.83e-20!63;CL:0000559!4.83e-20!63;CL:0002009!2.65e-19!65;CL:0002057!5.24e-18!42;CL:0000860!2.28e-17!45;CL:0000542!1.19e-13!53;CL:0000051!1.19e-13!53;CL:0000838!1.87e-13!52;CL:0000791!8.24e-11!18;CL:0000789!8.24e-11!18;CL:0002420!8.24e-11!18;CL:0002419!8.24e-11!18;CL:0000790!8.24e-11!18;CL:0000084!1.12e-09!25;CL:0000827!1.12e-09!25;CL:0000625!1.24e-07!11 | |||
|ontology_enrichment_celltype_v019=CL:0000473;3.84e-14;39!CL:0000234;3.84e-14;39!CL:0000860;2.92e-13;33!CL:0002057;2.92e-13;33!CL:0000576;3.41e-13;48!CL:0000766;5.74e-13;69!CL:0000791;1.00e-11;18!CL:0000789;1.00e-11;18!CL:0002419;1.00e-11;18!CL:0000763;1.34e-11;100!CL:0002087;8.68e-11;104!CL:0000084;1.49e-09;25!CL:0000988;3.07e-09;177!CL:0000738;4.10e-09;136!CL:0000625;3.64e-08;11!CL:0000542;2.07e-07;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,3.08e-53,168;CL:0002032,7.71e-53,161;CL:0000837,7.71e-53,161;CL:0000988,2.01e-50,177;CL:0000738,1.17e-42,136;CL:0000763,2.50e-38,108;CL:0000049,2.50e-38,108;CL:0002087,5.53e-38,115;CL:0002031,1.36e-36,120;CL:0000766,3.72e-30,72;CL:0000839,1.16e-25,66;CL:0002194,9.06e-24,59;CL:0000576,9.06e-24,59;CL:0000040,9.06e-24,59;CL:0000559,9.06e-24,59;CL:0000557,9.95e-24,67;CL:0000473,4.09e-23,48;CL:0000234,4.09e-23,48;CL:0002009,4.53e-22,61;CL:0000860,1.26e-19,42;CL:0002057,1.26e-19,42;CL:0000542,1.18e-12,53;CL:0000051,1.18e-12,53;CL:0000838,1.93e-12,52;CL:0000791,1.01e-11,18;CL:0000789,1.01e-11,18;CL:0002420,1.01e-11,18;CL:0002419,1.01e-11,18;CL:0000790,1.01e-11,18;CL:0000084,1.06e-09,25;CL:0000827,1.06e-09,25;CL:0000625,3.12e-08,11;CL:0002393,8.77e-07,9;CL:0002397,8.77e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002057;1.14e-14;42!CL:0000790;1.00e-11;18!CL:0000049;2.36e-11;108!CL:0000051;2.07e-07;53 | |||
|ontology_enrichment_disease=DOID:8692!8.91e-09!31;DOID:1240!9.59e-09!39;DOID:2531!5.61e-07!51;DOID:0060083!5.61e-07!51 | |||
|ontology_enrichment_disease_v019=DOID:8692;3.91e-09;31!DOID:1240;3.69e-07;39 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,3.10e-09,31;DOID:1240,8.83e-09,39 | |||
|ontology_enrichment_uberon=UBERON:0002390!3.67e-22!102;UBERON:0003061!3.67e-22!102;UBERON:0002193!1.48e-20!112;UBERON:0002371!1.84e-15!80;UBERON:0002405!9.63e-13!115;UBERON:0001474!1.58e-12!86;UBERON:0004765!1.92e-08!101;UBERON:0001434!1.92e-08!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.90e-25,98;UBERON:0003061,1.90e-25,98;UBERON:0002193,6.27e-23,108;UBERON:0002371,3.42e-18,76;UBERON:0002405,9.57e-18,93;UBERON:0001474,7.53e-15,82;UBERON:0004765,5.78e-13,90;UBERON:0001434,3.16e-09,100 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,2.21160542851358,13.9560233594486,1.52908960491121,1.58260186937072,0,0,0,0,0,0,0,0.408001382488506,0,0,0,0,4.66121775062503,4.51553241974702,3.54198515911557,8.26064981382698,6.90892916574983,7.58599004248772,5.51652734687356,1.50602959389125,3.69754010166788,1.39440961044543,0.710846162437108,2.64240395401362,9.41792194504192,3.20871115952227,13.4546739843828,1.56740831967947,4.21061765824673,3.34848237924443,5.81592955118259,4.1566353805769,5.57943340731977,5.57829688573643,7.81218987241469,5.26500830521676,6.61692502340946,12.5518746199259,5.20260905754887,7.23965929546899,18.0735711403471,9.47985406160392,5.45902784673554,5.18521685109907,3.14612878223118,4.89734227793444,7.38136762275015,3.19668562899521,6.92687730392104,10.1726465387032,7.2458207590558,7.2552309657146,6.80862269629368,5.60540024096017,6.53246529667532,7.30076085788282,9.99068685643537,6.65939452896706,7.36555271975129,4.74693581161327,7.18267973460602,15.5201138974482,8.80566311135179,3.36985893439485,4.50530678524519,2.73233497385036,14.8206626745449,26.0580847130808,16.6224379925817,3.51992488922645,4.91524750135918,5.33705552318133,8.53460445133014,9.6095036888643,2.87376219977242,6.61044872784862,2.86216126360609,6.26134266020393,2.34894875748376,7.26319133437935,0,4.48406850385229,1.58030450865046,6.88484195398416,6.28817220398664,15.6257139239627,10.365562714222,8.47397893247335,8.99550830895993,13.6378709885538,7.5759110681918,10.3112067616193,14.8427709371026,11.9153700056607,20.494611156108,20.5493769144608,18.2526074110081,21.5553013872962,12.1717296008722,8.74890722656157,9.36392898313996,24.0431704751447,9.17805675850286,7.2811893784365,11.6833331464094,8.09663014462409,8.60126618675061,14.9749194386976,7.60361635558699,9.48623250189969,10.3669155035079,9.99445812418767,11.6020853501568,9.85353596305256,11.8947978502592,7.75576567772171,13.1790207533347,0,1.34140171940727,0.255725123687061,0,0,0,0,0,0.567208902984407,1.10864698731282,1.58102614247627,0.916853528483988,5.46442932438813,2.22470665670658,18.499201438317,21.4179576878099,19.1459463147166,1.19245312152671,1.14398982156026,0.74291500265913,0.198762407366705,0,1.04142150482278,0.56530794192401,0.419499436209906,3.30141650328081,2.92592953151535,0.258416759169329,1.06729878806013,0.66944122552934,1.20848795132744,1.52054421143703,0.976248230192678,1.10298924103761,3.24056779152704,0.803697554556718,1.34717623575702,1.0135033243499,1.53316637465883,0,0.549605231791222,26.3560834872127,11.6334079244498,0.872188104285069,0,0,0,0,0,0,0,0,0,0.269421344139376,0.326923806226917,1.66493170409425,0.576175924479999,0,0,0,0,0,0,0.140450806702248,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.05847791642923,3.81844568827169,3.72845974005705,2.6834215348511,1.06023814657188,1.62671520017326,2.48786532036889,2.01856680700503,2.18986415445498,0,0,0,0,0,1.18306800039844,2.19160097101532,2.16909926895134,2.64705534557745,1.74303555273925,2.37270619111097,1.48314438976181,2.15843611637881,0.769494313892781,3.69077727312324,0,0.4115740113314,0,1.26755034821831,2.94848165003288,1.77236972004421,0.882926198829301,3.44367627920718,0.171567810298526,4.60951198716227,1.1240175325762,1.3068766413512,2.4998880192803,0,0,0,0.115930404975077,0.70445216541493,1.29929802984966,1.38895653772983,0.761016608938393,2.37061319387782,0.858486162094873,4.43190610957315,21.2943881276706,17.8357394746474,2.81201501960331,4.53551746136921,1.70130116690864,1.25381931783988,0.290633938513962,0,2.95597942737566,11.1821511196797,3.31724984865235,5.33243827642757,4.29224273649692,0.507983154337352,1.14596527667483,1.17217447210047,6.84289784090821,1.23392991243988,5.40617504119051,1.71495859578347,0.784917590417525,0,0.36669142910475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199945982364114,10.9461402577071,6.52934218861764,12.6500363689819,0,0,0,0.289562613335158,0,0,6.164682919644,12.2159071325195,5.60631694634745,12.1925884465761,0.254094624222463,0,0,0,0,11.9841123831549,11.966458368161,6.63064821497657,0,0.500170521059677,0,0,0,0,0,0,0,0,0,0,0,5.286631251494,1.02943027143257,9.09779314940704,7.33428282783297,11.526576242772,1.5156378572313,0,0.604780586659361,0,0,0,0,0,0,0,0,0,0,0,0,4.71351853407327,7.21823293091825,3.40699659062816,0,0,0.131124414959424,5.41439535488894,4.08181286653398,7.84349769176855,1.46139224653261,0.949964660035881,0,1.53084334748864,1.29549549661284,0,0.812839312631559,2.00675909541941,2.80363900349542,6.64860807142979,0.447749509444357,2.41185864310528,4.18296721639841,2.56450125116389,6.56029291399411,2.92840555197873,1.03041011647722,0,0,1.14853107599234,1.95018073810956,0,0,0,0,0,0,0,0.255679882248303,0,1.4875642382488,3.45942121257191,2.29702882490251,3.54052232994425,0,0,0,0,0,0,0,0,0.744316738719335,0.316379424718726,0.38126038784765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281695602532241,0,0,0,0,0.211107635297664,0,0,0.349934720244983,0.865999014529609,3.35151137767894,1.08890984861323,1.31801321087491,8.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| ||
|short_description=p3@TMC6 | |||
}} | }} |
Latest revision as of 20:22, 17 September 2015
Short description: | p3@TMC6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_TMC6_5end |
Coexpression cluster: | C3690_CD4_CD14CD16_optic_substantia_acute_Eosinophils_migratory |
Association with transcript: | 48bp_to_uc010dhf.1_5end |
EntrezGene: | TMC6 |
HGNC: | 18021 |
UniProt: | Q7L2M4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.90e-25 | 98 |
blood island | 1.90e-25 | 98 |
hemolymphoid system | 6.27e-23 | 108 |
bone marrow | 3.42e-18 | 76 |
immune system | 9.57e-18 | 93 |
bone element | 7.53e-15 | 82 |
skeletal element | 5.78e-13 | 90 |
skeletal system | 3.16e-09 | 100 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 3.10e-09 | 31 |
leukemia | 8.83e-09 | 39 |