FFCP PHASE1:Hg19::chr18:21166757..21166776,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr18:21166757..21166776,- to FFCP PHASE1:Hg19::chr18:21166757..21166776,-: NSchange) |
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(10 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4864 | |EntrezGene=4864 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7897 | |HGNC=7897 | ||
|TSSclassifier=strong | |||
|UniProt=O15118 | |UniProt=O15118 | ||
|association_with_transcript=-176bp_to_NM_000271,uc002kum.3,uc010xba.1_5end | |||
|cluster_id=chr18:21166757..21166776,- | |||
|coexpression_cluster_id=C3709 | |||
|description=CAGE_peak_5_at_NPC1_5end | |||
|id=chr18:21166757..21166776,- | |||
|ontology_enrichment_celltype=CL:0000860!1.70e-16!45;CL:0002194!3.70e-16!63;CL:0000576!3.70e-16!63;CL:0000040!3.70e-16!63;CL:0000559!3.70e-16!63;CL:0002009!4.19e-16!65;CL:0002057!1.77e-15!42;CL:0000557!5.56e-13!71;CL:0000766!7.71e-13!76;CL:0000839!9.16e-13!70 | |||
|ontology_enrichment_celltype_v019=CL:0000860;5.97e-31;33!CL:0002057;5.97e-31;33!CL:0000473;1.80e-29;39!CL:0000234;1.80e-29;39!CL:0000576;1.41e-14;48!CL:0000766;2.05e-11;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,2.19e-32,48;CL:0000234,2.19e-32,48;CL:0002194,5.11e-28,59;CL:0000576,5.11e-28,59;CL:0000040,5.11e-28,59;CL:0000559,5.11e-28,59;CL:0000860,5.27e-28,42;CL:0002057,5.27e-28,42;CL:0002009,1.13e-26,61;CL:0000839,1.11e-23,66;CL:0000766,2.06e-23,72;CL:0000557,3.86e-23,67;CL:0000763,1.96e-11,108;CL:0000049,1.96e-11,108;CL:0002087,8.46e-10,115;CL:0002031,6.17e-09,120;CL:0000738,8.53e-08,136 | |||
|ontology_enrichment_development_v019=CL:0002057;1.44e-21;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000062!1.19e-16!511;UBERON:0002371!4.00e-13!80;UBERON:0001474!3.37e-12!86;UBERON:0000467!9.61e-12!625;UBERON:0000480!1.63e-11!626;UBERON:0004765!2.98e-10!101;UBERON:0001434!2.98e-10!101;UBERON:0002405!8.25e-10!115;UBERON:0000468!1.54e-09!659;UBERON:0000923!1.97e-08!604;UBERON:0005291!1.97e-08!604;UBERON:0006598!1.97e-08!604;UBERON:0002532!1.97e-08!604;UBERON:0002050!3.04e-08!605;UBERON:0005423!3.04e-08!605;UBERON:0002390!6.55e-08!102;UBERON:0003061!6.55e-08!102;UBERON:0000922!7.70e-08!612;UBERON:0002193!3.28e-07!112 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.16e-24,76;UBERON:0001474,1.38e-21,82;UBERON:0004765,1.86e-18,90;UBERON:0002405,1.98e-17,93;UBERON:0002390,8.11e-17,98;UBERON:0003061,8.11e-17,98;UBERON:0001434,2.93e-16,100;UBERON:0002193,4.91e-14,108 | |||
|phase1_expression=0.54503513781167,0.642301571672949,0.422863212287913,1.0007329835313,0.893922188854576,0,0,0,0.261185628199839,0.737201809504527,0.697801167972428,1.52908960491121,1.05506791291381,0.37129905888014,0,0.672325146451775,0,0.730310090387373,0,0.492484232307152,0,0,0.286235987131057,0.410623275218653,1.12988375635323,0.229240217243854,0.0821005894499457,0,0,1.53531759238885,0.154816123316076,0,0.30120591877825,0.739508020333575,0,0.142169232487422,0,0,1.60435557976113,1.08505435357926,0.447830948479849,0.971680998056939,0.257575567634187,1.74477886535478,1.88937971844405,0.485168122375632,4.88100977501938,6.57868620834921,6.19412741790207,4.02769349251011,10.7587496742222,7.33094912654614,3.10271112662957,6.45484683583826,6.77132432971709,2.07066573496865,3.27487380069415,1.12361742222542,3.67300670845083,4.49300637906531,2.55734850319616,4.28806690242731,6.38283704389222,5.11469700639233,2.03146467040009,2.26954089876456,3.11411124497787,15.8286659111748,11.9941071236646,12.3797641481916,1.21079900526674,5.52416453981347,3.79754864929061,0.633765858935825,0.850417199860174,0.419317291016752,0.44931452458598,0,0.16072558669708,0.285012743741249,0.19891667719909,0.182664153764634,0,0,0,0.426730222566507,0,0,0,0,1.1384259382189,0,0,0,0.560508562981536,0,0.393419540227666,0,0.205601498999509,0,0.651844533267181,0.473447805734733,0,0.334231370655521,0.883817722424512,0.221533894583621,0.270803863765016,0,0,0,0,0,0.296573126324121,0,0,0,0,0,0,0,0,0,0.301150238155546,0,0,0.236777252044017,0,0.604820229674197,0.802320587350522,0.434473211648397,0,0,0.255725123687061,0,0.50133791063589,0.434539556882471,0,0.486634870302636,0.283604451492204,0.221729397462564,0.351339142772504,0.130979075497713,0.728590576585084,0.370784442784429,1.29818957461873,0.522389211897802,1.46253756570752,0.238490624305342,0.571994910780128,0.371457501329565,0.198762407366705,0.860234595106124,0.347140501607594,0,0,0.275118041940067,0.208994966536811,0.516833518338658,0.71153252537342,0,0,0,0.24406205754817,0,0,0.17859945656816,0,0.112611480483322,0,0,0,0,0,0,0,0.12663051166458,0.529636723252875,2.0078563452417,0,0.560677600142307,0,0.24666754841716,0.311211035399766,0.269421344139376,0,0.605429710579726,0,0.234321431833797,0.624320153660641,0,0.747243402759005,0.704606991862589,0.161872944368132,0.561803226808994,0.204154171254893,0.245668634623536,0.413303124703062,0,0.494533858557114,0.910161361938026,0.718618141816238,0.168336113954066,0.125118519871964,0.277064115484183,0.438977620880838,0.30648779579902,1.65261864797256,0,3.04962380671065,0,0,1.20036438433761,0.206105058476878,1.28820270022815,0.18611685633159,1.18143432568886,0.68205903612839,1.51460264546469,0.368199594569197,0,2.13005755509969,0.503760491138201,0.339121184620975,0.966304265816484,0.272746120590835,0.860413786167011,0.121973706129595,0,0.232387885739037,0.414644220061482,0.756962552626885,0,0,0,0,1.85747171212792,0.721879481669586,0.354920400119532,0.674338760312407,0.723033089650446,0.882351781859152,1.52515610864684,1.42362371466658,0.943819157121151,0.98110732562673,0.38474715694639,0,0,0,0,1.26755034821831,0.982827216677626,1.18157981336281,0,0.983907508344908,0.514703430895577,0.658501712451753,2.24803506515239,0.301586917234893,0.185176890317059,0.325808305310325,1.03993478527958,0,0.231860809950154,0.117408694235822,0.721832238805369,0,0,0,0.858486162094873,2.70838706696137,1.63802985597466,3.86441021950693,0,0.839910640994298,0.425325291727159,0.447792613514241,0.581267877027924,0,0,0,0,0.288239906833923,0.12624243342638,0.190493682876507,0,1.17217447210047,0,0.308482478109971,1.8020583470635,0,0.448524337381443,0,0.2933531432838,0.517086863031111,0,0,0.26593811658487,0,1.28603687131071,0,0.532844358032199,0.428933980974443,0,0,0,0.710783897485092,0,0,0,0.299918973546171,1.2162378064119,1.50677127429638,0,0,0,0,0.868687840005475,2.05476322550383,1.61154866915906,0,0.197030760201927,1.07813787429759,0.256686072559497,0,0,0,0.335032530668698,0.637938751653163,0.749007023947182,2.99161459204025,0.828831026872071,0,0.500170521059677,0,0,0,0.315404830067869,0,0.902838299183157,11.3703752027992,4.1389228517002,0,0.184369168541703,0.781952530212746,0.195801157462741,0.686286847621712,0.206768026122887,0.431428401637234,0.320182673410333,3.94065842880137,0,0.907170879989041,1.24053903909388,1.84154367945675,0,1.53766979106841,0,0.321707842287215,0,0,0.177561725313127,0.246381468041427,0.519254429183621,0,1.32945394550784,1.60405176242628,0.460404944679482,0.574072240823034,0.182091168006717,0.393373244878272,2.25599806453706,3.08061348417659,2.35304930753057,0,1.58327443339314,0,0.170093705276516,0,0,1.35473218771926,0,3.82314409567557,0.831076008928724,2.46262230194396,0.219259876645935,0,3.59030175162945,0.656029291399411,0.976135183992909,0.721287081534056,0.183138929636687,0,0.574265537996172,0.650060246036521,1.6068392984416,0,0.154048617114644,0.307007349452259,0.413509717453592,0.537101224341368,0.435050081742686,0.255679882248303,0.08903203564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|phase1_expression=0.54503513781167,0.642301571672949,0.422863212287913,1.0007329835313,0.893922188854576,0,0,0,0.261185628199839,0.737201809504527,0.697801167972428,1.52908960491121,1.05506791291381,0.37129905888014,0,0.672325146451775,0,0.730310090387373,0,0.492484232307152,0,0,0.286235987131057,0.410623275218653,1.12988375635323,0.229240217243854,0.0821005894499457,0,0,1.53531759238885,0.154816123316076,0,0.30120591877825,0.739508020333575,0,0.142169232487422,0,0,1.60435557976113,1.08505435357926,0.447830948479849,0.971680998056939,0.257575567634187,1.74477886535478,1.88937971844405,0.485168122375632,4.88100977501938,6.57868620834921,6.19412741790207,4.02769349251011,10.7587496742222,7.33094912654614,3.10271112662957,6.45484683583826,6.77132432971709,2.07066573496865,3.27487380069415,1.12361742222542,3.67300670845083,4.49300637906531,2.55734850319616,4.28806690242731,6.38283704389222,5.11469700639233,2.03146467040009,2.26954089876456,3.11411124497787,15.8286659111748,11.9941071236646,12.3797641481916,1.21079900526674,5.52416453981347,3.79754864929061,0.633765858935825,0.850417199860174,0.419317291016752,0.44931452458598,0,0.16072558669708,0.285012743741249,0.19891667719909,0.182664153764634,0,0,0,0.426730222566507,0,0,0,0,1.1384259382189,0,0,0,0.560508562981536,0,0.393419540227666,0,0.205601498999509,0,0.651844533267181,0.473447805734733,0,0.334231370655521,0.883817722424512,0.221533894583621,0.270803863765016,0,0,0,0,0,0.296573126324121,0,0,0,0,0,0,0,0,0,0.301150238155546,0,0,0.236777252044017,0,0.604820229674197,0.802320587350522,0.434473211648397,0,0,0.255725123687061,0,0.50133791063589,0.434539556882471,0,0.486634870302636,0.283604451492204,0.221729397462564,0.351339142772504,0.130979075497713,0.728590576585084,0.370784442784429,1.29818957461873,0.522389211897802,1.46253756570752,0.238490624305342,0.571994910780128,0.371457501329565,0.198762407366705,0.860234595106124,0.347140501607594,0,0,0.275118041940067,0.208994966536811,0.516833518338658,0.71153252537342,0,0,0,0.24406205754817,0,0,0.17859945656816,0,0.112611480483322,0,0,0,0,0,0,0,0.12663051166458,0.529636723252875,2.0078563452417,0,0.560677600142307,0,0.24666754841716,0.311211035399766,0.269421344139376,0,0.605429710579726,0,0.234321431833797,0.624320153660641,0,0.747243402759005,0.704606991862589,0.161872944368132,0.561803226808994,0.204154171254893,0.245668634623536,0.413303124703062,0,0.494533858557114,0.910161361938026,0.718618141816238,0.168336113954066,0.125118519871964,0.277064115484183,0.438977620880838,0.30648779579902,1.65261864797256,0,3.04962380671065,0,0,1.20036438433761,0.206105058476878,1.28820270022815,0.18611685633159,1.18143432568886,0.68205903612839,1.51460264546469,0.368199594569197,0,2.13005755509969,0.503760491138201,0.339121184620975,0.966304265816484,0.272746120590835,0.860413786167011,0.121973706129595,0,0.232387885739037,0.414644220061482,0.756962552626885,0,0,0,0,1.85747171212792,0.721879481669586,0.354920400119532,0.674338760312407,0.723033089650446,0.882351781859152,1.52515610864684,1.42362371466658,0.943819157121151,0.98110732562673,0.38474715694639,0,0,0,0,1.26755034821831,0.982827216677626,1.18157981336281,0,0.983907508344908,0.514703430895577,0.658501712451753,2.24803506515239,0.301586917234893,0.185176890317059,0.325808305310325,1.03993478527958,0,0.231860809950154,0.117408694235822,0.721832238805369,0,0,0,0.858486162094873,2.70838706696137,1.63802985597466,3.86441021950693,0,0.839910640994298,0.425325291727159,0.447792613514241,0.581267877027924,0,0,0,0,0.288239906833923,0.12624243342638,0.190493682876507,0,1.17217447210047,0,0.308482478109971,1.8020583470635,0,0.448524337381443,0,0.2933531432838,0.517086863031111,0,0,0.26593811658487,0,1.28603687131071,0,0.532844358032199,0.428933980974443,0,0,0,0.710783897485092,0,0,0,0.299918973546171,1.2162378064119,1.50677127429638,0,0,0,0,0.868687840005475,2.05476322550383,1.61154866915906,0,0.197030760201927,1.07813787429759,0.256686072559497,0,0,0,0.335032530668698,0.637938751653163,0.749007023947182,2.99161459204025,0.828831026872071,0,0.500170521059677,0,0,0,0.315404830067869,0,0.902838299183157,11.3703752027992,4.1389228517002,0,0.184369168541703,0.781952530212746,0.195801157462741,0.686286847621712,0.206768026122887,0.431428401637234,0.320182673410333,3.94065842880137,0,0.907170879989041,1.24053903909388,1.84154367945675,0,1.53766979106841,0,0.321707842287215,0,0,0.177561725313127,0.246381468041427,0.519254429183621,0,1.32945394550784,1.60405176242628,0.460404944679482,0.574072240823034,0.182091168006717,0.393373244878272,2.25599806453706,3.08061348417659,2.35304930753057,0,1.58327443339314,0,0.170093705276516,0,0,1.35473218771926,0,3.82314409567557,0.831076008928724,2.46262230194396,0.219259876645935,0,3.59030175162945,0.656029291399411,0.976135183992909,0.721287081534056,0.183138929636687,0,0.574265537996172,0.650060246036521,1.6068392984416,0,0.154048617114644,0.307007349452259,0.413509717453592,0.537101224341368,0.435050081742686,0.255679882248303,0.08903203564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| ||
|short_description=p5@NPC1 | |||
}} | }} |
Latest revision as of 23:48, 18 September 2015
Short description: | p5@NPC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_NPC1_5end |
Coexpression cluster: | C3709_schwannoma_CD14_corpus_Macrophage_prostate_optic_clear |
Association with transcript: | -176bp_to_NM_000271, uc002kum.3, uc010xba.1_5end |
EntrezGene: | NPC1 |
HGNC: | 7897 |
UniProt: | O15118 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 2.19e-32 | 48 |
phagocyte | 2.19e-32 | 48 |
monopoietic cell | 5.11e-28 | 59 |
monocyte | 5.11e-28 | 59 |
monoblast | 5.11e-28 | 59 |
promonocyte | 5.11e-28 | 59 |
classical monocyte | 5.27e-28 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.27e-28 | 42 |
macrophage dendritic cell progenitor | 1.13e-26 | 61 |
myeloid lineage restricted progenitor cell | 1.11e-23 | 66 |
myeloid leukocyte | 2.06e-23 | 72 |
granulocyte monocyte progenitor cell | 3.86e-23 | 67 |
myeloid cell | 1.96e-11 | 108 |
common myeloid progenitor | 1.96e-11 | 108 |
nongranular leukocyte | 8.46e-10 | 115 |
hematopoietic lineage restricted progenitor cell | 6.17e-09 | 120 |
leukocyte | 8.53e-08 | 136 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.16e-24 | 76 |
bone element | 1.38e-21 | 82 |
skeletal element | 1.86e-18 | 90 |
immune system | 1.98e-17 | 93 |
hematopoietic system | 8.11e-17 | 98 |
blood island | 8.11e-17 | 98 |
skeletal system | 2.93e-16 | 100 |
hemolymphoid system | 4.91e-14 | 108 |