FFCP PHASE1:Hg19::chr18:3449695..3449712,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr18:3449695..3449712,+ to FFCP PHASE1:Hg19::chr18:3449695..3449712,+: NSchange) |
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(10 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7050 | |EntrezGene=7050 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11776 | |HGNC=11776 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000343820_5end | |||
|cluster_id=chr18:3449695..3449712,+ | |||
|coexpression_cluster_id=C65 | |||
|description=CAGE_peak_9_at_TGIF1_5end | |||
|id=chr18:3449695..3449712,+ | |||
|ontology_enrichment_celltype=CL:0000860!6.15e-17!45;CL:0002057!3.43e-16!42;CL:0000557!2.22e-10!71;CL:0002009!3.86e-10!65;CL:0000839!1.10e-09!70;CL:0002194!2.14e-09!63;CL:0000576!2.14e-09!63;CL:0000040!2.14e-09!63;CL:0000559!2.14e-09!63;CL:0000063!4.07e-09!578;CL:0000766!1.04e-07!76;CL:0002031!7.33e-07!124 | |||
|ontology_enrichment_celltype_v019=CL:0000860;6.33e-26;33!CL:0002057;6.33e-26;33!CL:0000473;1.18e-17;39!CL:0000234;1.18e-17;39!CL:0000576;9.46e-14;48!CL:0000766;2.65e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.97e-23,42;CL:0002057,1.97e-23,42;CL:0000473,8.77e-20,48;CL:0000234,8.77e-20,48;CL:0002009,3.29e-15,61;CL:0000557,3.82e-15,67;CL:0000839,4.81e-14,66;CL:0002194,5.11e-14,59;CL:0000576,5.11e-14,59;CL:0000040,5.11e-14,59;CL:0000559,5.11e-14,59;CL:0002031,9.53e-13,120;CL:0000766,2.48e-11,72;CL:0002087,1.73e-10,115;CL:0000738,2.14e-09,136 | |||
|ontology_enrichment_development_v019=CL:0002057;5.89e-19;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.18e-08!102;UBERON:0003061!1.18e-08!102;UBERON:0002371!1.40e-08!80;UBERON:0001474!1.14e-07!86;UBERON:0004765!1.82e-07!101;UBERON:0001434!1.82e-07!101;UBERON:0002193!6.61e-07!112 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.23e-13,76;UBERON:0001474,8.58e-13,82;UBERON:0004765,1.01e-11,90;UBERON:0002390,1.76e-11,98;UBERON:0003061,1.76e-11,98;UBERON:0001434,2.05e-10,100;UBERON:0002193,3.85e-10,108;UBERON:0002405,5.69e-10,93;UBERON:0005631,2.49e-07,14;UBERON:0000158,2.49e-07,14 | |||
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| ||
|short_description=p9@TGIF1 | |||
}} | }} |
Latest revision as of 10:15, 19 September 2015
Short description: | p9@TGIF1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_TGIF1_5end |
Coexpression cluster: | C65_CD14_Eosinophils_Monocytederived_Basophils_immature_Macrophage_Neutrophils |
Association with transcript: | 0bp_to_ENST00000343820_5end |
EntrezGene: | TGIF1 |
HGNC: | 11776 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.97e-23 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.97e-23 | 42 |
defensive cell | 8.77e-20 | 48 |
phagocyte | 8.77e-20 | 48 |
macrophage dendritic cell progenitor | 3.29e-15 | 61 |
granulocyte monocyte progenitor cell | 3.82e-15 | 67 |
myeloid lineage restricted progenitor cell | 4.81e-14 | 66 |
monopoietic cell | 5.11e-14 | 59 |
monocyte | 5.11e-14 | 59 |
monoblast | 5.11e-14 | 59 |
promonocyte | 5.11e-14 | 59 |
hematopoietic lineage restricted progenitor cell | 9.53e-13 | 120 |
myeloid leukocyte | 2.48e-11 | 72 |
nongranular leukocyte | 1.73e-10 | 115 |
leukocyte | 2.14e-09 | 136 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.23e-13 | 76 |
bone element | 8.58e-13 | 82 |
skeletal element | 1.01e-11 | 90 |
hematopoietic system | 1.76e-11 | 98 |
blood island | 1.76e-11 | 98 |
skeletal system | 2.05e-10 | 100 |
hemolymphoid system | 3.85e-10 | 108 |
immune system | 5.69e-10 | 93 |
extraembryonic membrane | 2.49e-07 | 14 |
membranous layer | 2.49e-07 | 14 |