FFCP PHASE1:Hg19::chr19:12811938..12811939,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr19:12811938..12811939,- to FFCP PHASE1:Hg19::chr19:12811938..12811939,-: NSchange) |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=30000 | |EntrezGene=30000 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=19998 | |HGNC=19998 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-499bp_to_AL832114_5end | |||
|cluster_id=chr19:12811938..12811939,- | |||
|coexpression_cluster_id=C9 | |||
|description=CAGE_peak_15_at_TNPO2_5end | |||
|id=chr19:12811938..12811939,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002591;1.12e-17;1!CL:0002596;8.69e-10;2!CL:0000062;2.20e-08;9!CL:0000746;7.08e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002591,1.70e-17,1;CL:0002596,8.69e-10,2;CL:0000062,5.47e-07,11;CL:0000375,5.47e-07,11;CL:0000335,5.47e-07,11;CL:0000746,6.50e-07,3;CL:0000513,6.50e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0005754;1.12e-17;1!UBERON:0007297;1.64e-09;2!CL:0000335;5.15e-07;11!CL:0000513;7.08e-07;3!UBERON:0006215;9.37e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3307;1.64e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3307,1.33e-09,2 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0001389;2.66e-18;1!UBERON:0000026;2.66e-18;1!UBERON:0008784;2.66e-18;1!UBERON:0006058;2.66e-18;1!UBERON:0003663;2.66e-18;1!UBERON:0004256;2.66e-18;1!UBERON:0004708;2.66e-18;1!UBERON:0002101;2.66e-18;1!UBERON:0004709;2.66e-18;1!UBERON:0002529;2.66e-18;1!UBERON:0010538;2.66e-18;1!UBERON:0003661;2.66e-18;1!UBERON:0010890;2.66e-18;1!UBERON:0002471;2.66e-18;1!UBERON:0001383;2.66e-18;1!UBERON:0010758;2.66e-18;1!UBERON:0010707;2.66e-18;1!UBERON:0000978;2.66e-18;1!UBERON:0002103;2.66e-18;1!UBERON:0001665;2.66e-18;1!UBERON:0003823;2.66e-18;1!UBERON:0000154;2.66e-18;1!UBERON:0010709;2.66e-18;1!UBERON:0000998;1.12e-17;1!UBERON:0006868;1.12e-17;1!UBERON:0005090;7.98e-10;2!UBERON:0001630;7.98e-10;2!UBERON:0005396;8.69e-10;2!UBERON:0000078;1.64e-09;2!UBERON:0002012;1.64e-09;2!UBERON:0008886;1.64e-09;2!UBERON:0006947;9.37e-07;3!UBERON:0004054;9.37e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005418,2.66e-18,1;UBERON:0001389,2.66e-18,1;UBERON:0000026,2.66e-18,1;UBERON:0008784,2.66e-18,1;UBERON:0006058,2.66e-18,1;UBERON:0003663,2.66e-18,1;UBERON:0004256,2.66e-18,1;UBERON:0004708,2.66e-18,1;UBERON:0002101,2.66e-18,1;UBERON:0004709,2.66e-18,1;UBERON:0002529,2.66e-18,1;UBERON:0010538,2.66e-18,1;UBERON:0003661,2.66e-18,1;UBERON:0010890,2.66e-18,1;UBERON:0002471,2.66e-18,1;UBERON:0001383,2.66e-18,1;UBERON:0004357,2.66e-18,1;UBERON:0004347,2.66e-18,1;UBERON:0005420,2.66e-18,1;UBERON:0005732,2.66e-18,1;UBERON:0010758,2.66e-18,1;UBERON:0010707,2.66e-18,1;UBERON:0000978,2.66e-18,1;UBERON:0002103,2.66e-18,1;UBERON:0001665,2.66e-18,1;UBERON:0003823,2.66e-18,1;UBERON:0000154,2.66e-18,1;UBERON:0010709,2.66e-18,1;UBERON:0005733,2.66e-18,1;UBERON:0005730,2.66e-18,1;UBERON:0000998,8.72e-18,1;UBERON:0006868,8.72e-18,1;UBERON:0005090,7.98e-10,2;UBERON:0001630,7.98e-10,2;UBERON:0005396,8.69e-10,2;UBERON:0000078,2.02e-09,2;UBERON:0007497,2.02e-09,2;UBERON:0003643,2.02e-09,2;UBERON:0003504,2.02e-09,2;UBERON:0003469,2.02e-09,2;UBERON:0003496,2.02e-09,2;UBERON:0002012,2.02e-09,2;UBERON:0008886,2.02e-09,2;UBERON:0007303,2.02e-09,2;UBERON:0002061,2.02e-09,2;UBERON:0005432,2.02e-09,2;UBERON:0004363,2.02e-09,2;UBERON:0006947,8.62e-07,3;UBERON:0004054,8.62e-07,3 | |||
|phase1_expression=0,0.214100523890983,0,0,0.446961094427288,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.377875943688809,0,0,0,0,0.28769239232215,0,0,0,0,1.35426486594342,0,0,0,0.612167784741805,0,0,0,0,0.852449501065388,0,0,0.622822248995575,0,0,0,2.42159801053347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411202997999018,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0,0,0,0.144846518960824,0,0,0,0,0,0,0,0.370784442784429,0,0.348259474598534,0.132957960518865,0.238490624305342,0,0,0,0.860234595106124,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0,0,0.24666754841716,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438977620880838,0,0,0,0,0,0,0,0,0,0,0.168776332241266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100528972411631,0,0,0,0,0,0,0,0.462985512576611,0.380508304469197,0,0,0,0,0.297262324577456,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.845302752556,0,0,0.257207374262142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0,0,0,0,2.27407504055985,2.0694614258501,0,0.184369168541703,0,0,0.343143423810856,0,0,0,0,0,0,0,0,0.280660094433074,0,0,0.321707842287215,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.501689773854853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154048617114644,0,0,0,0,0,0.178064071293475,0,0,0,0,0.464845549297286,0,0,0,0,0,0,0,0,0,0,0,0,0,3.13979456079692,0,0,0,0,0,0,0,0,0,0.136499911407986,0,1.13008116620243,0,0,0.438450885253763,0.578775534266688,0.655894752046633,0,0,0,0,0,0,0,0,0.329294892959902,0,0,0,0.670302275535787,0,0,0,0,0,0,0,0,0,0,0,0.648473311192717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0.140669416410513,0,0.16480387422676,0,0,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,1.52581736317083,0.110579259931225,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.802577647298789,0,0,0,0,0,0,0,0,0,0,0.664653872707185,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0.0821154570532092,0,0,0.677942222341597,0,0,0,0,0,0.213452994739353,0,0.288180834308212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.837847203816763,0,0,0,0.429226048136571,0.223171457441873,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0,0,0,0,0,0,0.662091970365432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0.221858103073705,0,0,0,0,0,0.235265819698172,0,0,0,0,0,0,0,0.889811221596536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343395705182793,0,0,0,0,0,0,0,0,0.179088841081487,0,0,0,0.192914038270915,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157265941855896,0,0,0.212574920101683,0,0,0,0,0,0,0,0,0,0,0,0.252071696221718,0,0,0,0.0981477185010256,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336283722218824,0,0,0,0,0,0,0,0,0,0.235479278551542,0,0,0.913158720509496,0,0,0,0,0,0,0.801711364730253,0,0,0.691259661814092,0,0,0,1.69354820076372,0,0,0,0,0,0,14.8908632553216,0.307988420568741,0,0.971421986118279,0,0,0,0,0,0,0,0,0,0,0,0.588925401344836,0,0,0,0,0,0,0,0,0,1.46067277649303,0.458729283404541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267964130156178,0,0,0,0,0.0645889098360061,0,0,0,0,0,0,0,0,0,0,0,1.9307228228694,0,0,0,0,0.665756774185513,0,0.320568492303233 | |phase1_expression=0,0.214100523890983,0,0,0.446961094427288,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.377875943688809,0,0,0,0,0.28769239232215,0,0,0,0,1.35426486594342,0,0,0,0.612167784741805,0,0,0,0,0.852449501065388,0,0,0.622822248995575,0,0,0,2.42159801053347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411202997999018,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0,0,0,0.144846518960824,0,0,0,0,0,0,0,0.370784442784429,0,0.348259474598534,0.132957960518865,0.238490624305342,0,0,0,0.860234595106124,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0,0,0.24666754841716,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438977620880838,0,0,0,0,0,0,0,0,0,0,0.168776332241266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100528972411631,0,0,0,0,0,0,0,0.462985512576611,0.380508304469197,0,0,0,0,0.297262324577456,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.845302752556,0,0,0.257207374262142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0,0,0,0,2.27407504055985,2.0694614258501,0,0.184369168541703,0,0,0.343143423810856,0,0,0,0,0,0,0,0,0.280660094433074,0,0,0.321707842287215,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.501689773854853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154048617114644,0,0,0,0,0,0.178064071293475,0,0,0,0,0.464845549297286,0,0,0,0,0,0,0,0,0,0,0,0,0,3.13979456079692,0,0,0,0,0,0,0,0,0,0.136499911407986,0,1.13008116620243,0,0,0.438450885253763,0.578775534266688,0.655894752046633,0,0,0,0,0,0,0,0,0.329294892959902,0,0,0,0.670302275535787,0,0,0,0,0,0,0,0,0,0,0,0.648473311192717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0.140669416410513,0,0.16480387422676,0,0,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,1.52581736317083,0.110579259931225,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.802577647298789,0,0,0,0,0,0,0,0,0,0,0.664653872707185,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0.0821154570532092,0,0,0.677942222341597,0,0,0,0,0,0.213452994739353,0,0.288180834308212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.837847203816763,0,0,0,0.429226048136571,0.223171457441873,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0,0,0,0,0,0,0.662091970365432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0.221858103073705,0,0,0,0,0,0.235265819698172,0,0,0,0,0,0,0,0.889811221596536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343395705182793,0,0,0,0,0,0,0,0,0.179088841081487,0,0,0,0.192914038270915,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157265941855896,0,0,0.212574920101683,0,0,0,0,0,0,0,0,0,0,0,0.252071696221718,0,0,0,0.0981477185010256,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336283722218824,0,0,0,0,0,0,0,0,0,0.235479278551542,0,0,0.913158720509496,0,0,0,0,0,0,0.801711364730253,0,0,0.691259661814092,0,0,0,1.69354820076372,0,0,0,0,0,0,14.8908632553216,0.307988420568741,0,0.971421986118279,0,0,0,0,0,0,0,0,0,0,0,0.588925401344836,0,0,0,0,0,0,0,0,0,1.46067277649303,0.458729283404541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267964130156178,0,0,0,0,0.0645889098360061,0,0,0,0,0,0,0,0,0,0,0,1.9307228228694,0,0,0,0,0.665756774185513,0,0.320568492303233 | ||
|short_description=p15@TNPO2 | |||
}} | }} |
Latest revision as of 19:54, 15 September 2015
Short description: | p15@TNPO2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_15_at_TNPO2_5end |
Coexpression cluster: | C9_skeletal_diaphragm_tongue_throat_penis_heart_left |
Association with transcript: | -499bp_to_AL832114_5end |
EntrezGene: | TNPO2 |
HGNC: | 19998 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the pulmonary artery | 1.70e-17 | 1 |
smooth muscle cell of the carotid artery | 8.69e-10 | 2 |
osteoblast | 5.47e-07 | 11 |
osteoprogenitor cell | 5.47e-07 | 11 |
mesenchyme condensation cell | 5.47e-07 | 11 |
cardiac muscle cell | 6.50e-07 | 3 |
cardiac muscle myoblast | 6.50e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
teratoma | 1.33e-09 | 2 |