FFCP PHASE1:Hg19::chr1:154580616..154580695,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:154580616..154580695,- to FFCP PHASE1:Hg19::chr1:154580616..154580695,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=103 | |EntrezGene=103 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=225 | |HGNC=225 | ||
|TSSclassifier=strong | |||
|UniProt=P55265,A2IBT1 | |UniProt=P55265,A2IBT1 | ||
|association_with_transcript=0bp_to_ENST00000368474,uc001ffh.2,uc001ffi.2,uc001ffj.2,uc001ffn.1_5end | |||
|cluster_id=chr1:154580616..154580695,- | |||
|coexpression_cluster_id=C344 | |||
|description=CAGE_peak_1_at_ADAR_5end | |||
|id=chr1:154580616..154580695,- | |||
|ontology_enrichment_celltype=CL:0000738!3.71e-42!140;CL:0002087!6.58e-36!119;CL:0002031!2.34e-33!124;CL:0000037!1.07e-30!172;CL:0000566!1.07e-30!172;CL:0002032!1.20e-28!165;CL:0000837!1.20e-28!165;CL:0000766!7.70e-28!76;CL:0000988!4.84e-27!182;CL:0000557!4.02e-23!71;CL:0002194!2.85e-22!63;CL:0000576!2.85e-22!63;CL:0000040!2.85e-22!63;CL:0000559!2.85e-22!63;CL:0002057!5.04e-22!42;CL:0002009!1.02e-21!65;CL:0000860!1.04e-21!45;CL:0000839!1.06e-21!70;CL:0000763!3.84e-16!112;CL:0000049!3.84e-16!112;CL:0000542!4.11e-12!53;CL:0000051!4.11e-12!53;CL:0000838!6.72e-12!52;CL:0000791!8.80e-07!18;CL:0000789!8.80e-07!18;CL:0002420!8.80e-07!18;CL:0002419!8.80e-07!18;CL:0000790!8.80e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.59e-17;33!CL:0002057;1.59e-17;33!CL:0000576;2.67e-15;48!CL:0000473;3.39e-14;39!CL:0000234;3.39e-14;39!CL:0000766;2.23e-12;69!CL:0002087;1.34e-11;104!CL:0000738;6.40e-09;136!CL:0000542;6.57e-07;53!CL:0000791;8.48e-07;18!CL:0000789;8.48e-07;18!CL:0002419;8.48e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.89e-42,136;CL:0002087,3.02e-36,115;CL:0002031,1.30e-33,120;CL:0000037,1.06e-30,168;CL:0002032,1.18e-28,161;CL:0000837,1.18e-28,161;CL:0000766,2.02e-28,72;CL:0000988,3.24e-27,177;CL:0000557,1.33e-23,67;CL:0002194,7.72e-23,59;CL:0000576,7.72e-23,59;CL:0000040,7.72e-23,59;CL:0000559,7.72e-23,59;CL:0002009,3.15e-22,61;CL:0000839,3.84e-22,66;CL:0000860,5.04e-22,42;CL:0002057,5.04e-22,42;CL:0000473,2.21e-21,48;CL:0000234,2.21e-21,48;CL:0000763,3.72e-16,108;CL:0000049,3.72e-16,108;CL:0000542,4.11e-12,53;CL:0000051,4.11e-12,53;CL:0000838,6.72e-12,52;CL:0000791,8.80e-07,18;CL:0000789,8.80e-07,18;CL:0002420,8.80e-07,18;CL:0002419,8.80e-07,18;CL:0000790,8.80e-07,18 | |||
|ontology_enrichment_development_v019=CL:0002057;4.80e-16;42!CL:0000051;6.57e-07;53!CL:0000790;8.48e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.89e-26!102;UBERON:0003061!1.89e-26!102;UBERON:0002193!2.84e-26!112;UBERON:0002405!2.58e-20!115;UBERON:0002371!1.65e-19!80;UBERON:0001474!1.12e-18!86;UBERON:0004765!2.08e-14!101;UBERON:0001434!2.08e-14!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.02e-26,98;UBERON:0003061,1.02e-26,98;UBERON:0002193,1.81e-26,108;UBERON:0002405,4.31e-22,93;UBERON:0002371,9.10e-20,76;UBERON:0001474,7.24e-19,82;UBERON:0004765,4.61e-16,90;UBERON:0001434,7.88e-14,100 | |||
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4 | ||
|short_description=p1@ADAR | |||
}} | }} |
Latest revision as of 09:44, 17 September 2015
Short description: | p1@ADAR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ADAR_5end |
Coexpression cluster: | C344_Neutrophils_CD14_Eosinophils_Whole_blood_CD14CD16_gall |
Association with transcript: | 0bp_to_ENST00000368474, uc001ffh.2, uc001ffi.2, uc001ffj.2, uc001ffn.1_5end |
EntrezGene: | ADAR |
HGNC: | 225 |
UniProt: | P55265A2IBT1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.02e-26 | 98 |
blood island | 1.02e-26 | 98 |
hemolymphoid system | 1.81e-26 | 108 |
immune system | 4.31e-22 | 93 |
bone marrow | 9.10e-20 | 76 |
bone element | 7.24e-19 | 82 |
skeletal element | 4.61e-16 | 90 |
skeletal system | 7.88e-14 | 100 |