FFCP PHASE1:Hg19::chr1:245134140..245134165,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:245134140..245134165,+ to FFCP PHASE1:Hg19::chr1:245134140..245134165,+: NSchange) |
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(9 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr1:245134140..245134165,+ | |||
|coexpression_cluster_id=C1306 | |||
|description=CAGE_peak_at_chr1:245134140..245134165,+ | |||
|id=chr1:245134140..245134165,+ | |||
|ontology_enrichment_celltype=CL:0000738!2.90e-34!140;CL:0000037!1.49e-30!172;CL:0000566!1.49e-30!172;CL:0002031!8.91e-30!124;CL:0000988!2.22e-29!182;CL:0002087!2.24e-28!119;CL:0002032!4.06e-27!165;CL:0000837!4.06e-27!165;CL:0002057!2.72e-17!42;CL:0000860!1.19e-16!45;CL:0000766!5.09e-16!76;CL:0000839!3.85e-15!70;CL:0000557!8.94e-15!71;CL:0002009!3.23e-14!65;CL:0000542!9.95e-14!53;CL:0000051!9.95e-14!53;CL:0000763!1.26e-13!112;CL:0000049!1.26e-13!112;CL:0000838!1.71e-13!52;CL:0002194!2.94e-13!63;CL:0000576!2.94e-13!63;CL:0000040!2.94e-13!63;CL:0000559!2.94e-13!63;CL:0000791!2.00e-11!18;CL:0000789!2.00e-11!18;CL:0002420!2.00e-11!18;CL:0002419!2.00e-11!18;CL:0000790!2.00e-11!18;CL:0000625!3.67e-08!11;CL:0000084!5.67e-08!25;CL:0000827!5.67e-08!25;CL:0000034!9.80e-08!444;CL:0000134!1.02e-07!358;CL:0002320!2.55e-07!365;CL:0000048!3.50e-07!430;CL:0000723!3.80e-07!436;CL:0000236!5.40e-07!14;CL:0002393!9.76e-07!9;CL:0002397!9.76e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000791;1.00e-20;18!CL:0000789;1.00e-20;18!CL:0002419;1.00e-20;18!CL:0000576;8.00e-16;48!CL:0000860;1.03e-15;33!CL:0002057;1.03e-15;33!CL:0000766;7.77e-15;69!CL:0000084;9.91e-15;25!CL:0000625;2.53e-14;11!CL:0002087;1.34e-13;104!CL:0000542;4.19e-12;53!CL:0000236;1.25e-11;13!CL:0000473;2.17e-11;39!CL:0000234;2.17e-11;39!CL:0000738;3.83e-10;136!CL:0000624;1.22e-09;6!CL:0002393;3.42e-08;6!CL:0002397;3.42e-08;6!CL:0000988;3.66e-08;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,9.82e-55,136;CL:0002031,2.13e-46,120;CL:0000037,2.72e-43,168;CL:0002087,5.51e-43,115;CL:0000988,5.99e-43,177;CL:0002032,2.78e-37,161;CL:0000837,2.78e-37,161;CL:0000766,1.80e-26,72;CL:0000860,1.69e-25,42;CL:0002057,1.69e-25,42;CL:0000839,1.56e-23,66;CL:0000557,1.80e-23,67;CL:0000473,2.09e-22,48;CL:0000234,2.09e-22,48;CL:0002009,4.62e-22,61;CL:0000791,6.37e-21,18;CL:0000789,6.37e-21,18;CL:0002420,6.37e-21,18;CL:0002419,6.37e-21,18;CL:0000790,6.37e-21,18;CL:0002194,2.90e-20,59;CL:0000576,2.90e-20,59;CL:0000040,2.90e-20,59;CL:0000559,2.90e-20,59;CL:0000838,8.29e-20,52;CL:0000542,3.21e-19,53;CL:0000051,3.21e-19,53;CL:0000763,6.77e-18,108;CL:0000049,6.77e-18,108;CL:0000084,8.35e-15,25;CL:0000827,8.35e-15,25;CL:0000625,1.66e-14,11;CL:0000134,1.39e-12,354;CL:0002320,2.58e-12,361;CL:0002393,1.00e-11,9;CL:0002397,1.00e-11,9;CL:0000236,1.72e-10,14;CL:0000219,2.79e-10,386;CL:0000034,1.04e-09,441;CL:0000624,1.16e-09,6;CL:0000048,1.25e-09,427;CL:0000723,1.79e-09,433 | |||
|ontology_enrichment_development_v019=CL:0000790;1.00e-20;18!CL:0002057;1.47e-19;42!CL:0000051;4.19e-12;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.18e-16!102;UBERON:0003061!2.18e-16!102;UBERON:0002193!6.70e-16!112;UBERON:0002371!1.89e-13!80;UBERON:0002405!2.70e-11!115;UBERON:0001474!1.03e-10!86;UBERON:0003081!9.65e-07!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,8.90e-26,98;UBERON:0003061,8.90e-26,98;UBERON:0002193,1.00e-23,108;UBERON:0002371,2.95e-21,76;UBERON:0002405,1.04e-18,93;UBERON:0001474,1.14e-18,82;UBERON:0004765,8.65e-16,90;UBERON:0001434,6.82e-13,100;UBERON:0003081,1.08e-11,203;UBERON:0002384,3.03e-11,371 | |||
|phase1_expression=0,0.428201047781966,0.140954404095971,1.0007329835313,0.446961094427288,0.872338524100369,0,0,0.783556884599516,0,0,0.655324116390517,0,0,0,0.672325146451775,0,0,0.487932798790507,0.492484232307152,1.02000345622126,1.25381888591235,0.572471974262113,0.684372125364421,0.125542639594803,0.61130724598361,0.492603536699674,0.472264687882075,5.11373559903575,1.15148819429164,4.18003532953405,0.919421224478927,0.6024118375565,0.369754010166788,0.309868802321207,0,1.46800219667424,6.64794490238253,4.8130667392834,9.54847831149748,0.671746422719773,1.29557466407592,1.03030227053675,1.59938062657521,1.13362783106643,2.91100873425379,2.32429036905685,1.23350366406548,2.78735733805593,0.28769239232215,1.0246428261164,2.12834006899727,2.75796544589295,1.93645405075148,1.35426486594342,2.25890807451126,3.0019676506363,2.24723484445085,0.612167784741805,1.28371610830437,0.639337125799041,0.329851300186716,1.19678194572979,2.55734850319616,3.19230162491442,0.56738522469114,3.73693349397345,0.502497330513487,0,2.17188844705117,3.02699751316684,0.736555271975129,2.84816148696796,1.69004229049553,2.97646019951061,5.2414661377094,5.05478840159228,3.90459921387916,3.37523732063868,6.84030584978997,2.78483348078726,3.10529061399878,5.27988733383968,6.55366333514558,7.11607403090844,3.41384178053206,6.4063357925762,4.02326707968138,3.30522436392431,7.63243003628291,2.27685187643779,2.34894875748376,5.3518251937532,2.64342657158052,3.92355994087075,0.263384084775077,5.90129310341499,7.8602152549833,9.04646595597841,2.17342444007882,11.4072793321757,15.6237775892462,5.84480185223734,1.89397776704795,9.13278313171995,9.08288967792847,5.95768500283034,1.5370958367081,3.51160238411671,1.15106533222573,3.31620021343018,0,11.2697788003166,12.0393372640371,13.589618094647,1.0197840842781,9.58051234004803,16.1504899376836,5.06039384039006,5.41561204350964,3.90650072313851,9.50452044448374,5.11955404864427,4.47953139040464,2.49861453104692,1.65744076430812,6.56902397536837,7.66105624253983,6.95344509037119,6.37227377084316,0,0,0.12786256184353,0,0,0.144846518960824,0,0.973269740605272,0.283604451492204,0,0.175669571386252,0.327447688744282,0.728590576585084,0,0,0.522389211897802,0.26591592103773,3.10037811596945,3.43196946468077,4.82894751728434,0.596287222100115,0,0,0,0,0.275118041940067,0.208994966536811,0,0.35576626268671,0.66944122552934,0,0.760272105718513,0.732186172644509,0.367663080345869,0,0.17859945656816,0.22452937262617,0.563057402416611,3.06633274931766,0,1.09921046358244,6.58902087180316,0,0.436094052142534,0,0,0.529636723252875,0,0,0.560677600142307,0,0,0.311211035399766,0.134710672069688,0.326923806226917,0.302714855289863,0,0,0,0.570471821544449,0,0,0,0.140450806702248,0.204154171254893,0.368502951935304,0,1.18800285728205,0.741800787835671,0,1.43723628363248,0,0,0,0,0.30648779579902,0.300476117813194,0,0.538168907066586,0.427114777637135,0,0,0,0.257640540045629,0.37223371266318,0.337552664482532,0.194874010322397,0,0.276149695926898,0.323292113637624,0,0.201504196455281,0.339121184620975,0.193260853163297,0.818238361772504,0,0.243947412259191,0.397589304964456,0.580969714347592,0.310983165046111,0,0.72995471815166,3.12899064659632,1.28648187638577,1.38134921352481,0,0,0.118306800039844,0.674338760312407,0,0.330881918197182,0.217879444092406,0.474541238222193,1.48314438976181,0.784885860501384,0.38474715694639,0.738155454624648,0,0,1.47008711385542,1.26755034821831,0.982827216677626,0,1.7658523976586,0.491953754172454,0,0.109750285408626,1.1240175325762,0,0,0.325808305310325,0,0,0,0,0.144366447761074,1.38895653772983,0.190254152234598,2.37061319387782,0,0.492434012174795,0.234004265139238,0.148631162288728,0,0,0,0,0,1.15014803749563,0,0.616339038092582,8.29312462163088,9.51191692551945,6.05963680446624,0,0,0,0,0,0,0,0.448524337381443,0,0,0,0,0,0.797814349754612,0,0,1.41849132023278,0.799266537048298,0,0.542621605391443,0,0,0,0,0.301439377059586,0,0.199945982364114,0,0,2.10833939483032,0,1.14861935834114,0,0.289562613335158,0.205476322550383,0,0.112085143993527,5.91092280605782,5.60631694634745,5.13372145118993,0,0,1.54657762555539,0.670065061337395,1.27587750330633,2.99602809578873,0,4.97298616123243,0.12269149171914,0,0,0.415941723061614,0.178428988797162,0.315404830067869,0.117141414992713,0,0,0,0,0.184369168541703,0.347534457872331,0.979005787313703,2.05886054286514,3.92859249633486,3.66714141391649,1.921096040462,1.81876542867756,3.32870879020994,1.5119514666484,0,0.306923946576125,0,0.256278298511402,0.511707249066704,0.321707842287215,0,0.154209693802656,0.177561725313127,0,0,0,0,0,0.184161977871793,0,0,0.131124414959424,0.451199612907412,0.0770153371044148,0,1.46139224653261,0,1.13733384070897,0.170093705276516,0.215915916102139,3.08454505380579,0,1.50506932156456,0,0,0,1.09629938322967,1.5686127061494,0.512900250232778,0.328014645699706,0,0.206082023295445,0,0.082509499920588,0,1.30012049207304,0,0.096670718292122,0,0.307007349452259,0.551346289938122,0,0.145016693914229,0.255679882248303,0.3561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|phase1_expression=0,0.428201047781966,0.140954404095971,1.0007329835313,0.446961094427288,0.872338524100369,0,0,0.783556884599516,0,0,0.655324116390517,0,0,0,0.672325146451775,0,0,0.487932798790507,0.492484232307152,1.02000345622126,1.25381888591235,0.572471974262113,0.684372125364421,0.125542639594803,0.61130724598361,0.492603536699674,0.472264687882075,5.11373559903575,1.15148819429164,4.18003532953405,0.919421224478927,0.6024118375565,0.369754010166788,0.309868802321207,0,1.46800219667424,6.64794490238253,4.8130667392834,9.54847831149748,0.671746422719773,1.29557466407592,1.03030227053675,1.59938062657521,1.13362783106643,2.91100873425379,2.32429036905685,1.23350366406548,2.78735733805593,0.28769239232215,1.0246428261164,2.12834006899727,2.75796544589295,1.93645405075148,1.35426486594342,2.25890807451126,3.0019676506363,2.24723484445085,0.612167784741805,1.28371610830437,0.639337125799041,0.329851300186716,1.19678194572979,2.55734850319616,3.19230162491442,0.56738522469114,3.73693349397345,0.502497330513487,0,2.17188844705117,3.02699751316684,0.736555271975129,2.84816148696796,1.69004229049553,2.97646019951061,5.2414661377094,5.05478840159228,3.90459921387916,3.37523732063868,6.84030584978997,2.78483348078726,3.10529061399878,5.27988733383968,6.55366333514558,7.11607403090844,3.41384178053206,6.4063357925762,4.02326707968138,3.30522436392431,7.63243003628291,2.27685187643779,2.34894875748376,5.3518251937532,2.64342657158052,3.92355994087075,0.263384084775077,5.90129310341499,7.8602152549833,9.04646595597841,2.17342444007882,11.4072793321757,15.6237775892462,5.84480185223734,1.89397776704795,9.13278313171995,9.08288967792847,5.95768500283034,1.5370958367081,3.51160238411671,1.15106533222573,3.31620021343018,0,11.2697788003166,12.0393372640371,13.589618094647,1.0197840842781,9.58051234004803,16.1504899376836,5.06039384039006,5.41561204350964,3.90650072313851,9.50452044448374,5.11955404864427,4.47953139040464,2.49861453104692,1.65744076430812,6.56902397536837,7.66105624253983,6.95344509037119,6.37227377084316,0,0,0.12786256184353,0,0,0.144846518960824,0,0.973269740605272,0.283604451492204,0,0.175669571386252,0.327447688744282,0.728590576585084,0,0,0.522389211897802,0.26591592103773,3.10037811596945,3.43196946468077,4.82894751728434,0.596287222100115,0,0,0,0,0.275118041940067,0.208994966536811,0,0.35576626268671,0.66944122552934,0,0.760272105718513,0.732186172644509,0.367663080345869,0,0.17859945656816,0.22452937262617,0.563057402416611,3.06633274931766,0,1.09921046358244,6.58902087180316,0,0.436094052142534,0,0,0.529636723252875,0,0,0.560677600142307,0,0,0.311211035399766,0.134710672069688,0.326923806226917,0.302714855289863,0,0,0,0.570471821544449,0,0,0,0.140450806702248,0.204154171254893,0.368502951935304,0,1.18800285728205,0.741800787835671,0,1.43723628363248,0,0,0,0,0.30648779579902,0.300476117813194,0,0.538168907066586,0.427114777637135,0,0,0,0.257640540045629,0.37223371266318,0.337552664482532,0.194874010322397,0,0.276149695926898,0.323292113637624,0,0.201504196455281,0.339121184620975,0.193260853163297,0.818238361772504,0,0.243947412259191,0.397589304964456,0.580969714347592,0.310983165046111,0,0.72995471815166,3.12899064659632,1.28648187638577,1.38134921352481,0,0,0.118306800039844,0.674338760312407,0,0.330881918197182,0.217879444092406,0.474541238222193,1.48314438976181,0.784885860501384,0.38474715694639,0.738155454624648,0,0,1.47008711385542,1.26755034821831,0.982827216677626,0,1.7658523976586,0.491953754172454,0,0.109750285408626,1.1240175325762,0,0,0.325808305310325,0,0,0,0,0.144366447761074,1.38895653772983,0.190254152234598,2.37061319387782,0,0.492434012174795,0.234004265139238,0.148631162288728,0,0,0,0,0,1.15014803749563,0,0.616339038092582,8.29312462163088,9.51191692551945,6.05963680446624,0,0,0,0,0,0,0,0.448524337381443,0,0,0,0,0,0.797814349754612,0,0,1.41849132023278,0.799266537048298,0,0.542621605391443,0,0,0,0,0.301439377059586,0,0.199945982364114,0,0,2.10833939483032,0,1.14861935834114,0,0.289562613335158,0.205476322550383,0,0.112085143993527,5.91092280605782,5.60631694634745,5.13372145118993,0,0,1.54657762555539,0.670065061337395,1.27587750330633,2.99602809578873,0,4.97298616123243,0.12269149171914,0,0,0.415941723061614,0.178428988797162,0.315404830067869,0.117141414992713,0,0,0,0,0.184369168541703,0.347534457872331,0.979005787313703,2.05886054286514,3.92859249633486,3.66714141391649,1.921096040462,1.81876542867756,3.32870879020994,1.5119514666484,0,0.306923946576125,0,0.256278298511402,0.511707249066704,0.321707842287215,0,0.154209693802656,0.177561725313127,0,0,0,0,0,0.184161977871793,0,0,0.131124414959424,0.451199612907412,0.0770153371044148,0,1.46139224653261,0,1.13733384070897,0.170093705276516,0.215915916102139,3.08454505380579,0,1.50506932156456,0,0,0,1.09629938322967,1.5686127061494,0.512900250232778,0.328014645699706,0,0.206082023295445,0,0.082509499920588,0,1.30012049207304,0,0.096670718292122,0,0.307007349452259,0.551346289938122,0,0.145016693914229,0.255679882248303,0.3561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| ||
|short_description=p@chr1:245134140..245134165,+ | |||
}} | }} |
Latest revision as of 06:01, 28 July 2015
Short description: | p@chr1:245134140..245134165, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:245134140..245134165, + |
Coexpression cluster: | C1306_CD4_Mast_Basophils_Natural_CD19_CD14_CD8 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 8.90e-26 | 98 |
blood island | 8.90e-26 | 98 |
hemolymphoid system | 1.00e-23 | 108 |
bone marrow | 2.95e-21 | 76 |
immune system | 1.04e-18 | 93 |
bone element | 1.14e-18 | 82 |
skeletal element | 8.65e-16 | 90 |
skeletal system | 6.82e-13 | 100 |
lateral plate mesoderm | 1.08e-11 | 203 |
connective tissue | 3.03e-11 | 371 |