FFCP PHASE1:Hg19::chr20:57581518..57581550,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr20:57581518..57581550,- to FFCP PHASE1:Hg19::chr20:57581518..57581550,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1522 | |EntrezGene=1522 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2547 | |HGNC=2547 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-37bp_to_ENST00000488395_5end | |||
|cluster_id=chr20:57581518..57581550,- | |||
|coexpression_cluster_id=C71 | |||
|description=CAGE_peak_3_at_CTSZ_5end | |||
|id=chr20:57581518..57581550,- | |||
|ontology_enrichment_celltype=CL:0002194!2.40e-27!63;CL:0000576!2.40e-27!63;CL:0000040!2.40e-27!63;CL:0000559!2.40e-27!63;CL:0002009!6.62e-27!65;CL:0000839!2.43e-24!70;CL:0000557!6.04e-24!71;CL:0000766!5.45e-21!76;CL:0002057!1.41e-20!42;CL:0000860!1.11e-19!45;CL:0000763!5.22e-13!112;CL:0000049!5.22e-13!112;CL:0002087!6.29e-07!119 | |||
|ontology_enrichment_celltype_v019=CL:0000473;1.03e-36;39!CL:0000234;1.03e-36;39!CL:0000860;2.28e-34;33!CL:0002057;2.28e-34;33!CL:0000576;1.34e-26;48!CL:0000766;5.57e-19;69!CL:0000235;2.94e-11;6!CL:0000990;1.93e-08;8!CL:0000763;6.64e-08;100!CL:0000738;3.33e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0002009,2.05e-52,61;CL:0002194,3.20e-52,59;CL:0000576,3.20e-52,59;CL:0000040,3.20e-52,59;CL:0000559,3.20e-52,59;CL:0000473,8.86e-48,48;CL:0000234,8.86e-48,48;CL:0000557,2.96e-46,67;CL:0000839,5.55e-45,66;CL:0000766,1.12e-41,72;CL:0000860,2.58e-38,42;CL:0002057,2.58e-38,42;CL:0000763,1.06e-27,108;CL:0000049,1.06e-27,108;CL:0002087,3.59e-20,115;CL:0002031,8.74e-20,120;CL:0000738,1.73e-19,136;CL:0002032,5.19e-14,161;CL:0000837,5.19e-14,161;CL:0000037,8.49e-13,168;CL:0000988,2.14e-11,177;CL:0000235,2.84e-11,6;CL:0000134,1.11e-10,354;CL:0002320,4.71e-10,361;CL:0000048,3.84e-09,427;CL:0000723,4.21e-09,433;CL:0000990,1.04e-08,8;CL:0000034,1.63e-08,441;CL:0000219,2.14e-08,386;CL:0000451,7.41e-07,10 | |||
|ontology_enrichment_development_v019=CL:0002057;7.89e-28;42!CL:0000049;5.81e-09;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.38e-23!80;UBERON:0001474!4.43e-20!86;UBERON:0004765!3.05e-18!101;UBERON:0001434!3.05e-18!101;UBERON:0002193!1.74e-17!112;UBERON:0002390!5.66e-17!102;UBERON:0003061!5.66e-17!102;UBERON:0002204!3.47e-16!167;UBERON:0002405!8.08e-15!115;UBERON:0003081!3.45e-12!216;UBERON:0000926!7.72e-07!448;UBERON:0004120!7.72e-07!448;UBERON:0006603!7.72e-07!448 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.21e-44,76;UBERON:0001474,9.93e-40,82;UBERON:0002390,2.44e-36,98;UBERON:0003061,2.44e-36,98;UBERON:0004765,1.10e-34,90;UBERON:0002405,5.08e-33,93;UBERON:0001434,2.31e-32,100;UBERON:0002193,2.61e-31,108;UBERON:0002204,2.05e-22,167;UBERON:0003081,1.61e-19,203;UBERON:0000926,2.07e-13,315;UBERON:0004120,2.07e-13,315;UBERON:0006603,2.07e-13,315;UBERON:0002384,4.13e-10,371 | |||
|phase1_expression=0.726713517082227,1.07050261945492,0.563817616383885,1.0007329835313,0,1.74467704820074,0,0,0,0.245733936501509,0.697801167972428,0,0.263766978228454,0.123766352960047,0.662794751455832,1.34465029290355,0.602694528023977,0,0,0.246242116153576,0.204000691244253,0,0.286235987131057,0.273748850145768,0.502170558379211,0.152826811495903,0.164201178899891,0.314843125254717,0.393364276848904,0,0.154816123316076,0,0.6024118375565,0.369754010166788,0.0774672005803016,0.284338464974843,0,1.10799081706375,1.60435557976113,1.08505435357926,14.3305903513552,12.3079593087212,8.24241816429397,2.18097358169347,2.64513160582167,1.4555043671269,2.09186133215116,2.46700732813095,3.09706370895104,6.04154023876516,5.63553554364021,3.31075121844019,2.75796544589295,3.87290810150296,4.06279459783025,3.38836211176688,3.0019676506363,1.79778787556068,1.83650335422542,1.60464513538047,1.91801137739712,4.28806690242731,9.57425556583833,5.54092175692502,2.03146467040009,3.40431134814684,1.86846674698672,6.78371396193207,4.17186334736161,3.47502151528187,4.23779651843358,0,1.89877432464531,1.05627643155971,0.850417199860174,1.46761051855863,0.673971786878971,1.50176892841506,0.964353520182481,0.855038231223746,0.99458338599545,0,0,0,0,0.426730222566507,0.400395987036012,1.14950487990897,0.661044872784862,0,0,0.587237189370939,0,0,0.560508562981536,0,0.196709770113833,0,0.411202997999018,0.167186495390678,0,0,0,0.445641827540694,0,0,0,0,0,0.328875809207352,0.276350017785848,0.289803085735052,0,0,0,0.566546713487831,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0,0,0.670700859703636,0,0,0,0.869079113764942,4.7717156823066,0,0.189069634328136,0.221729397462564,0.087834785693126,0.196468613246569,0,0.370784442784429,7.46459005405772,8.00996791576629,15.9549552622638,0.476981248610684,0,0,0.79504962946682,0.860234595106124,0.694281003215189,0,0,1.10047216776027,0.835979866147242,0.516833518338658,0.71153252537342,0,0,0.760272105718513,0.976248230192678,1.10298924103761,0.81014194788176,0.0892997282840798,0.22452937262617,0.225222960966644,0,0,1.09921046358244,0,0,0,1.49091585508596,0.12663051166458,0,0,0,0,0,1.2333377420858,0,0.538842688278752,0.163461903113459,0.151357427644931,0,0,0,1.71141546463335,0.448346041655403,0.23486899728753,0,0.280901613404497,0,0.491337269247072,0.309977343527296,2.37600571456411,2.22540236350701,0.910161361938026,0,0.505008341862199,0.250237039743928,0,0,1.83892677479412,1.35214253015937,0,0.538168907066586,0.85422955527427,0.211931901159562,1.20036438433761,0.618315175430633,0.515281080091258,0.744467425326359,0.337552664482532,0.974370051611986,0.252433774244115,0.0920498986422993,0.161646056818812,0,1.0075209822764,0.169560592310488,0.773043412653187,0.545492241181669,0,0,0,0,0.207322110030741,0.252320850875628,0,0,0.643240938192885,2.76269842704961,0.928735856063958,0.721879481669586,0.354920400119532,0.337169380156203,0.723033089650446,1.10293972732394,1.52515610864684,0.949082476444386,0.674156540800822,0.98110732562673,1.15424147083917,0,0,0,0,0,0.982827216677626,0.590789906681404,0,0.245976877086227,0.171567810298526,0.219500570817251,1.1240175325762,0,0.0925884451585296,0.651616610620649,2.07986957055916,1.44331342025273,0,0.117408694235822,0.433099343283221,0.925971025153221,0.761016608938393,0,0,5.90920814609754,3.7440682422278,11.5932306585208,0,0.671928512795438,0.283550194484773,0,0,0,0,0.088048434013226,0.414656231081544,0.432359860250884,0.12624243342638,0.507983154337352,0.763976851116555,5.86087236050235,0,0.308482478109971,0.901029173531752,0.285826432630578,0,0.43596006883328,0.07333828582095,0.129271715757778,3.57656445851882,3.381211010224,0.26593811658487,0,0,1.41849132023278,0.799266537048298,0.285955987316295,0,0.823240336780769,0,0,0.791951872933429,0.602878754119172,0,0.899756920638513,12.162378064119,28.6286542116312,61.1418424500792,0,0,1.42636905040718,0.723906533337896,1.2328579353023,0.179060963239896,0,0,0,0,0.254094624222463,0,0,0,0,0,0,1.24324654030811,0,0.500170521059677,0,1.45579603071565,1.60586089917446,0.473107245101804,0.35142424497814,1.80567659836631,20.4666753650386,0,0,0.184369168541703,0.521301686808497,0,0,0.620304078368662,0.215714200818617,0.960548020230999,0,0,0.30239029332968,0.744323423456331,0.306923946576125,1.68396056659844,0.640695746278505,1.53512174720011,0.321707842287215,0,1.07946785661859,0.355123450626254,0.164254312027618,1.03850885836724,0.697262270759755,0.241718899183244,1.20303882181971,0.184161977871793,0.34444334449382,0,1.57349297951309,0,0.231046011313244,0,0,0,0,0.850468526382578,0.431831832204279,1.54227252690289,0.270946437543853,0,0.254876273045038,0,0.671624264166535,0,0.522870902049801,0,0.328014645699706,0.325378394664303,0.412164046590889,0,0,0.574265537996172,1.30012049207304,0,0.096670718292122,0.154048617114644,0.307007349452259,0.551346289938122,0.322260734604821,0,0.170453254832202,0.0890320356467374,0.991709492165869,0.768760269460425,0.127612712494584,0.4046311234222,0.929691098594572,1.5740617341532,0.6970372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|phase1_expression=0.726713517082227,1.07050261945492,0.563817616383885,1.0007329835313,0,1.74467704820074,0,0,0,0.245733936501509,0.697801167972428,0,0.263766978228454,0.123766352960047,0.662794751455832,1.34465029290355,0.602694528023977,0,0,0.246242116153576,0.204000691244253,0,0.286235987131057,0.273748850145768,0.502170558379211,0.152826811495903,0.164201178899891,0.314843125254717,0.393364276848904,0,0.154816123316076,0,0.6024118375565,0.369754010166788,0.0774672005803016,0.284338464974843,0,1.10799081706375,1.60435557976113,1.08505435357926,14.3305903513552,12.3079593087212,8.24241816429397,2.18097358169347,2.64513160582167,1.4555043671269,2.09186133215116,2.46700732813095,3.09706370895104,6.04154023876516,5.63553554364021,3.31075121844019,2.75796544589295,3.87290810150296,4.06279459783025,3.38836211176688,3.0019676506363,1.79778787556068,1.83650335422542,1.60464513538047,1.91801137739712,4.28806690242731,9.57425556583833,5.54092175692502,2.03146467040009,3.40431134814684,1.86846674698672,6.78371396193207,4.17186334736161,3.47502151528187,4.23779651843358,0,1.89877432464531,1.05627643155971,0.850417199860174,1.46761051855863,0.673971786878971,1.50176892841506,0.964353520182481,0.855038231223746,0.99458338599545,0,0,0,0,0.426730222566507,0.400395987036012,1.14950487990897,0.661044872784862,0,0,0.587237189370939,0,0,0.560508562981536,0,0.196709770113833,0,0.411202997999018,0.167186495390678,0,0,0,0.445641827540694,0,0,0,0,0,0.328875809207352,0.276350017785848,0.289803085735052,0,0,0,0.566546713487831,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0,0,0.670700859703636,0,0,0,0.869079113764942,4.7717156823066,0,0.189069634328136,0.221729397462564,0.087834785693126,0.196468613246569,0,0.370784442784429,7.46459005405772,8.00996791576629,15.9549552622638,0.476981248610684,0,0,0.79504962946682,0.860234595106124,0.694281003215189,0,0,1.10047216776027,0.835979866147242,0.516833518338658,0.71153252537342,0,0,0.760272105718513,0.976248230192678,1.10298924103761,0.81014194788176,0.0892997282840798,0.22452937262617,0.225222960966644,0,0,1.09921046358244,0,0,0,1.49091585508596,0.12663051166458,0,0,0,0,0,1.2333377420858,0,0.538842688278752,0.163461903113459,0.151357427644931,0,0,0,1.71141546463335,0.448346041655403,0.23486899728753,0,0.280901613404497,0,0.491337269247072,0.309977343527296,2.37600571456411,2.22540236350701,0.910161361938026,0,0.505008341862199,0.250237039743928,0,0,1.83892677479412,1.35214253015937,0,0.538168907066586,0.85422955527427,0.211931901159562,1.20036438433761,0.618315175430633,0.515281080091258,0.744467425326359,0.337552664482532,0.974370051611986,0.252433774244115,0.0920498986422993,0.161646056818812,0,1.0075209822764,0.169560592310488,0.773043412653187,0.545492241181669,0,0,0,0,0.207322110030741,0.252320850875628,0,0,0.643240938192885,2.76269842704961,0.928735856063958,0.721879481669586,0.354920400119532,0.337169380156203,0.723033089650446,1.10293972732394,1.52515610864684,0.949082476444386,0.674156540800822,0.98110732562673,1.15424147083917,0,0,0,0,0,0.982827216677626,0.590789906681404,0,0.245976877086227,0.171567810298526,0.219500570817251,1.1240175325762,0,0.0925884451585296,0.651616610620649,2.07986957055916,1.44331342025273,0,0.117408694235822,0.433099343283221,0.925971025153221,0.761016608938393,0,0,5.90920814609754,3.7440682422278,11.5932306585208,0,0.671928512795438,0.283550194484773,0,0,0,0,0.088048434013226,0.414656231081544,0.432359860250884,0.12624243342638,0.507983154337352,0.763976851116555,5.86087236050235,0,0.308482478109971,0.901029173531752,0.285826432630578,0,0.43596006883328,0.07333828582095,0.129271715757778,3.57656445851882,3.381211010224,0.26593811658487,0,0,1.41849132023278,0.799266537048298,0.285955987316295,0,0.823240336780769,0,0,0.791951872933429,0.602878754119172,0,0.899756920638513,12.162378064119,28.6286542116312,61.1418424500792,0,0,1.42636905040718,0.723906533337896,1.2328579353023,0.179060963239896,0,0,0,0,0.254094624222463,0,0,0,0,0,0,1.24324654030811,0,0.500170521059677,0,1.45579603071565,1.60586089917446,0.473107245101804,0.35142424497814,1.80567659836631,20.4666753650386,0,0,0.184369168541703,0.521301686808497,0,0,0.620304078368662,0.215714200818617,0.960548020230999,0,0,0.30239029332968,0.744323423456331,0.306923946576125,1.68396056659844,0.640695746278505,1.53512174720011,0.321707842287215,0,1.07946785661859,0.355123450626254,0.164254312027618,1.03850885836724,0.697262270759755,0.241718899183244,1.20303882181971,0.184161977871793,0.34444334449382,0,1.57349297951309,0,0.231046011313244,0,0,0,0,0.850468526382578,0.431831832204279,1.54227252690289,0.270946437543853,0,0.254876273045038,0,0.671624264166535,0,0.522870902049801,0,0.328014645699706,0.325378394664303,0.412164046590889,0,0,0.574265537996172,1.30012049207304,0,0.096670718292122,0.154048617114644,0.307007349452259,0.551346289938122,0.322260734604821,0,0.170453254832202,0.0890320356467374,0.991709492165869,0.768760269460425,0.127612712494584,0.4046311234222,0.929691098594572,1.5740617341532,0.6970372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| ||
|short_description=p3@CTSZ | |||
}} | }} |
Latest revision as of 07:15, 17 September 2015
Short description: | p3@CTSZ |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CTSZ_5end |
Coexpression cluster: | C71_Monocytederived_Macrophage_CD14_Dendritic_Osteoblast_leiomyoma_Prostate |
Association with transcript: | -37bp_to_ENST00000488395_5end |
EntrezGene: | CTSZ |
HGNC: | 2547 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage dendritic cell progenitor | 2.05e-52 | 61 |
monopoietic cell | 3.20e-52 | 59 |
monocyte | 3.20e-52 | 59 |
monoblast | 3.20e-52 | 59 |
promonocyte | 3.20e-52 | 59 |
defensive cell | 8.86e-48 | 48 |
phagocyte | 8.86e-48 | 48 |
granulocyte monocyte progenitor cell | 2.96e-46 | 67 |
myeloid lineage restricted progenitor cell | 5.55e-45 | 66 |
myeloid leukocyte | 1.12e-41 | 72 |
classical monocyte | 2.58e-38 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.58e-38 | 42 |
myeloid cell | 1.06e-27 | 108 |
common myeloid progenitor | 1.06e-27 | 108 |
nongranular leukocyte | 3.59e-20 | 115 |
hematopoietic lineage restricted progenitor cell | 8.74e-20 | 120 |
leukocyte | 1.73e-19 | 136 |
hematopoietic oligopotent progenitor cell | 5.19e-14 | 161 |
hematopoietic multipotent progenitor cell | 5.19e-14 | 161 |
hematopoietic stem cell | 8.49e-13 | 168 |
hematopoietic cell | 2.14e-11 | 177 |
macrophage | 2.84e-11 | 6 |
mesenchymal cell | 1.11e-10 | 354 |
connective tissue cell | 4.71e-10 | 361 |
multi fate stem cell | 3.84e-09 | 427 |
somatic stem cell | 4.21e-09 | 433 |
conventional dendritic cell | 1.04e-08 | 8 |
stem cell | 1.63e-08 | 441 |
motile cell | 2.14e-08 | 386 |
dendritic cell | 7.41e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.21e-44 | 76 |
bone element | 9.93e-40 | 82 |
hematopoietic system | 2.44e-36 | 98 |
blood island | 2.44e-36 | 98 |
skeletal element | 1.10e-34 | 90 |
immune system | 5.08e-33 | 93 |
skeletal system | 2.31e-32 | 100 |
hemolymphoid system | 2.61e-31 | 108 |
musculoskeletal system | 2.05e-22 | 167 |
lateral plate mesoderm | 1.61e-19 | 203 |
mesoderm | 2.07e-13 | 315 |
mesoderm-derived structure | 2.07e-13 | 315 |
presumptive mesoderm | 2.07e-13 | 315 |
connective tissue | 4.13e-10 | 371 |