FFCP PHASE1:Hg19::chr20:62711259..62711324,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr20:62711259..62711324,- to FFCP PHASE1:Hg19::chr20:62711259..62711324,-: NSchange) |
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(11 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10287 | |EntrezGene=10287 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13735 | |HGNC=13735 | ||
|TSSclassifier=strong | |||
|UniProt=P49795 | |UniProt=P49795 | ||
|association_with_transcript=0bp_to_ENST00000332298,NM_001039467,uc002yib.2_5end | |||
|cluster_id=chr20:62711259..62711324,- | |||
|description=CAGE_peak_2_at_RGS19_5end | |||
|id=chr20:62711259..62711324,- | |||
|ontology_enrichment_celltype=CL:0000988!1.00e-32!182;CL:0000037!1.38e-32!172;CL:0000566!1.38e-32!172;CL:0000003!6.29e-32!722;CL:0002032!3.11e-31!165;CL:0000837!3.11e-31!165;CL:0000063!3.03e-29!578;CL:0000738!3.26e-25!140;CL:0002087!1.07e-24!119;CL:0000548!2.69e-24!679;CL:0000004!2.69e-24!679;CL:0000255!2.69e-24!679;CL:0000012!7.91e-24!682;CL:0002031!1.99e-21!124;CL:0002371!6.26e-21!591;CL:0000144!7.45e-21!625;CL:0000763!3.64e-17!112;CL:0000049!3.64e-17!112;CL:0000134!2.75e-15!358;CL:0002320!1.79e-14!365;CL:0000219!7.54e-14!390;CL:0000542!1.47e-13!53;CL:0000051!1.47e-13!53;CL:0000838!3.04e-13!52;CL:0000766!9.66e-13!76;CL:0000048!4.38e-11!430;CL:0000723!4.85e-11!436;CL:0000557!5.48e-11!71;CL:0002194!1.83e-10!63;CL:0000576!1.83e-10!63;CL:0000040!1.83e-10!63;CL:0000559!1.83e-10!63;CL:0002009!4.05e-10!65;CL:0000945!1.21e-09!24;CL:0000826!1.21e-09!24;CL:0000034!1.68e-09!444;CL:0000839!1.82e-09!70;CL:0002057!3.41e-09!42;CL:0000860!5.26e-09!45;CL:0000236!1.50e-08!14;CL:0000115!2.88e-08!35;CL:0000213!4.12e-08!57;CL:0000215!4.12e-08!57;CL:0002078!1.94e-07!44;CL:0002393!6.24e-07!9;CL:0002397!6.24e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000945;9.09e-10;24!CL:0000542;9.80e-09;53!CL:0000236;2.61e-08;13!CL:0002087;1.80e-07;104!CL:0000763;2.62e-07;100!CL:0000115;3.44e-07;36!CL:0000576;4.75e-07;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,3.97e-33,168;CL:0000988,7.15e-33,177;CL:0002032,8.78e-32,161;CL:0000837,8.78e-32,161;CL:0000738,9.49e-26,136;CL:0002087,2.42e-25,115;CL:0002031,5.83e-22,120;CL:0000763,1.26e-17,108;CL:0000049,1.26e-17,108;CL:0000134,6.56e-15,354;CL:0002320,4.19e-14,361;CL:0000542,1.42e-13,53;CL:0000051,1.42e-13,53;CL:0000219,1.78e-13,386;CL:0000766,2.94e-13,72;CL:0000838,2.95e-13,52;CL:0000557,1.86e-11,67;CL:0002194,5.65e-11,59;CL:0000576,5.65e-11,59;CL:0000040,5.65e-11,59;CL:0000559,5.65e-11,59;CL:0002009,1.36e-10,61;CL:0000048,1.51e-10,427;CL:0000723,1.67e-10,433;CL:0000839,7.13e-10,66;CL:0000945,1.21e-09,24;CL:0000826,1.21e-09,24;CL:0000473,1.52e-09,48;CL:0000234,1.52e-09,48;CL:0000860,3.41e-09,42;CL:0002057,3.41e-09,42;CL:0000034,5.23e-09,441;CL:0000115,1.49e-08,36;CL:0000236,1.50e-08,14;CL:0000213,2.25e-08,58;CL:0000215,2.25e-08,58;CL:0002078,1.04e-07,45;CL:0002393,6.24e-07,9;CL:0002397,6.24e-07,9 | |||
|ontology_enrichment_development_v019=CL:0000051;9.80e-09;53!CL:0002057;6.61e-07;42 | |||
|ontology_enrichment_disease=DOID:2531!3.48e-11!51;DOID:0060083!3.48e-11!51;DOID:1240!1.78e-10!39;DOID:8692!1.33e-09!31 | |||
|ontology_enrichment_disease_v019=DOID:8692;3.84e-09;31!DOID:1240;2.03e-08;39!DOID:2531;3.66e-07;51!DOID:0060083;3.66e-07;51 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,3.38e-11,51;DOID:0060083,3.38e-11,51;DOID:1240,1.72e-10,39;DOID:8692,1.32e-09,31 | |||
|ontology_enrichment_uberon=UBERON:0002193!4.65e-16!112;UBERON:0002390!5.36e-15!102;UBERON:0003061!5.36e-15!102;UBERON:0002384!3.89e-13!375;UBERON:0003081!1.08e-10!216;UBERON:0001474!2.88e-10!86;UBERON:0002371!4.13e-10!80;UBERON:0002405!3.70e-09!115;UBERON:0004765!8.36e-08!101;UBERON:0001434!8.36e-08!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.77e-16,108;UBERON:0002390,1.96e-15,98;UBERON:0003061,1.96e-15,98;UBERON:0002405,5.00e-13,93;UBERON:0002384,8.84e-13,371;UBERON:0003081,8.73e-11,203;UBERON:0001474,1.30e-10,82;UBERON:0002371,1.76e-10,76;UBERON:0004765,3.15e-09,90;UBERON:0001434,1.26e-07,100 | |||
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| ||
|short_description=p2@RGS19 | |||
}} | }} |
Latest revision as of 15:24, 17 September 2015
Short description: | p2@RGS19 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_RGS19_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000332298, NM_001039467, uc002yib.2_5end |
EntrezGene: | RGS19 |
HGNC: | 13735 |
UniProt: | P49795 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 1.77e-16 | 108 |
hematopoietic system | 1.96e-15 | 98 |
blood island | 1.96e-15 | 98 |
immune system | 5.00e-13 | 93 |
connective tissue | 8.84e-13 | 371 |
lateral plate mesoderm | 8.73e-11 | 203 |
bone element | 1.30e-10 | 82 |
bone marrow | 1.76e-10 | 76 |
skeletal element | 3.15e-09 | 90 |
skeletal system | 1.26e-07 | 100 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 3.38e-11 | 51 |
immune system cancer | 3.38e-11 | 51 |
leukemia | 1.72e-10 | 39 |
myeloid leukemia | 1.32e-09 | 31 |