FFCP PHASE1:Hg19::chr20:9495263..9495313,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr20:9495263..9495313,+ to FFCP PHASE1:Hg19::chr20:9495263..9495313,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=24141 | |EntrezGene=24141 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16097 | |HGNC=16097 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UJQ1 | |UniProt=Q9UJQ1 | ||
|association_with_transcript=0bp_to_ENST00000427562,uc002wni.1,uc010zrc.1_5end | |||
|cluster_id=chr20:9495263..9495313,+ | |||
|coexpression_cluster_id=C2627 | |||
|description=CAGE_peak_3_at_LAMP5_5end | |||
|id=chr20:9495263..9495313,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000784;2.38e-10;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000784,2.38e-10,3 | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.58e-13;82!UBERON:0010122;4.72e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.23e-46!57;UBERON:0005068!1.23e-46!57;UBERON:0006241!1.23e-46!57;UBERON:0007135!1.23e-46!57;UBERON:0001017!1.06e-40!82;UBERON:0005743!1.60e-39!86;UBERON:0007023!8.90e-39!115;UBERON:0002616!1.48e-38!59;UBERON:0000073!4.71e-37!94;UBERON:0001016!4.71e-37!94;UBERON:0000955!3.91e-36!69;UBERON:0006238!3.91e-36!69;UBERON:0002780!6.16e-32!41;UBERON:0001890!6.16e-32!41;UBERON:0006240!6.16e-32!41;UBERON:0003075!1.20e-31!86;UBERON:0007284!1.20e-31!86;UBERON:0003080!7.01e-31!42;UBERON:0001869!1.18e-29!32;UBERON:0001893!1.95e-29!34;UBERON:0002020!2.11e-29!34;UBERON:0003528!2.11e-29!34;UBERON:0002346!2.17e-29!90;UBERON:0002791!3.07e-28!33;UBERON:0002619!3.05e-25!22;UBERON:0000153!8.66e-25!129;UBERON:0007811!8.66e-25!129;UBERON:0000033!2.49e-23!123;UBERON:0001950!7.26e-23!20;UBERON:0000956!2.27e-21!25;UBERON:0000203!2.27e-21!25;UBERON:0003056!5.92e-20!61;UBERON:0004121!1.42e-19!169;UBERON:0000924!1.29e-18!173;UBERON:0006601!1.29e-18!173;UBERON:0003076!7.63e-17!15;UBERON:0003057!7.63e-17!15;UBERON:0004733!4.06e-14!12;UBERON:0002028!4.06e-14!12;UBERON:0007277!4.06e-14!12;UBERON:0004732!9.62e-13!13;UBERON:0002680!8.42e-11!9;UBERON:0001895!8.42e-11!9;UBERON:0010092!8.42e-11!9;UBERON:0002420!8.25e-10!9;UBERON:0007245!8.25e-10!9;UBERON:0010009!8.25e-10!9;UBERON:0010011!8.25e-10!9;UBERON:0000454!8.25e-10!9;UBERON:0002308!1.85e-09!9;UBERON:0000125!1.85e-09!9;UBERON:0000200!7.47e-09!6;UBERON:0001871!2.89e-08!7;UBERON:0000349!9.12e-08!5;UBERON:0002037!2.22e-07!6;UBERON:0006215!2.22e-07!6;UBERON:0009663!2.37e-07!7;UBERON:0001872!3.30e-07!5;UBERON:0002021!4.38e-07!5;UBERON:0004111!5.40e-07!241;UBERON:0000369!9.36e-07!4;UBERON:0002435!9.36e-07!4;UBERON:0000204!9.36e-07!4;UBERON:0010082!9.36e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;1.07e-46;32!UBERON:0001893;1.85e-46;34!UBERON:0002791;2.33e-43;32!UBERON:0003528;2.43e-42;34!UBERON:0002020;2.43e-42;34!UBERON:0002619;1.55e-40;22!UBERON:0002780;1.04e-35;41!UBERON:0001890;1.04e-35;41!UBERON:0001950;1.16e-35;20!UBERON:0000956;3.09e-35;25!UBERON:0000203;3.09e-35;25!UBERON:0000073;3.23e-34;53!UBERON:0002616;3.23e-34;53!UBERON:0000955;6.00e-23;68!UBERON:0001017;6.70e-23;75!UBERON:0002420;1.28e-19;9!UBERON:0007245;1.28e-19;9!UBERON:0010009;1.28e-19;9!UBERON:0010011;1.28e-19;9!UBERON:0000454;1.28e-19;9!UBERON:0001016;2.01e-17;83!UBERON:0000200;5.99e-17;6!UBERON:0000125;5.23e-15;9!UBERON:0002308;5.23e-15;9!UBERON:0000349;1.17e-14;5!UBERON:0009663;2.15e-14;7!UBERON:0004733;2.50e-13;12!UBERON:0002028;2.50e-13;12!UBERON:0000369;1.49e-12;4!UBERON:0002435;1.49e-12;4!UBERON:0000204;1.49e-12;4!UBERON:0004732;3.40e-12;13!UBERON:0002298;8.68e-12;6!UBERON:0007023;1.30e-10;114!UBERON:0001871;1.94e-10;6!UBERON:0005383;6.61e-10;3!UBERON:0005382;6.61e-10;3!UBERON:0001872;1.71e-09;5!UBERON:0002021;2.00e-09;5!UBERON:0001870;3.43e-09;3!UBERON:0001896;1.01e-08;3!UBERON:0005290;1.01e-08;3!UBERON:0011216;2.00e-08;132!UBERON:0002680;1.92e-07;9!UBERON:0001895;1.92e-07;9!UBERON:0001873;4.72e-07;2!UBERON:0001876;4.86e-07;2!UBERON:0002702;9.86e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,5.01e-65,56;UBERON:0005068,5.01e-65,56;UBERON:0006241,5.01e-65,56;UBERON:0007135,5.01e-65,56;UBERON:0000073,5.04e-62,53;UBERON:0002616,5.04e-62,53;UBERON:0001893,1.30e-52,34;UBERON:0001869,2.60e-52,32;UBERON:0000955,3.27e-51,68;UBERON:0006238,3.27e-51,68;UBERON:0002780,2.23e-49,41;UBERON:0001890,2.23e-49,41;UBERON:0003080,2.23e-49,41;UBERON:0006240,2.23e-49,41;UBERON:0003528,5.07e-49,34;UBERON:0002020,5.07e-49,34;UBERON:0001017,6.01e-49,81;UBERON:0002791,4.43e-48,32;UBERON:0001016,5.81e-48,89;UBERON:0003075,1.39e-43,82;UBERON:0007284,1.39e-43,82;UBERON:0002346,4.49e-41,86;UBERON:0002619,1.45e-40,22;UBERON:0001950,1.16e-35,20;UBERON:0000956,2.92e-35,25;UBERON:0000203,2.92e-35,25;UBERON:0007023,2.82e-34,114;UBERON:0003056,4.63e-33,61;UBERON:0010371,3.66e-32,104;UBERON:0010314,4.54e-26,132;UBERON:0004121,1.89e-23,171;UBERON:0000924,1.89e-23,171;UBERON:0006601,1.89e-23,171;UBERON:0002420,1.38e-19,9;UBERON:0007245,1.38e-19,9;UBERON:0010009,1.38e-19,9;UBERON:0010011,1.38e-19,9;UBERON:0000454,1.38e-19,9;UBERON:0000200,5.36e-17,6;UBERON:0011216,3.76e-16,223;UBERON:0003076,4.02e-16,15;UBERON:0003057,4.02e-16,15;UBERON:0000125,5.23e-15,9;UBERON:0002308,5.23e-15,9;UBERON:0000349,1.06e-14,5;UBERON:0009663,2.29e-14,7;UBERON:0004733,2.24e-13,12;UBERON:0002028,2.24e-13,12;UBERON:0007277,2.24e-13,12;UBERON:0000369,1.43e-12,4;UBERON:0002435,1.43e-12,4;UBERON:0000204,1.43e-12,4;UBERON:0010082,1.43e-12,4;UBERON:0004732,3.07e-12,13;UBERON:0000025,6.61e-12,192;UBERON:0002298,8.02e-12,6;UBERON:0004111,3.41e-11,240;UBERON:0001871,2.04e-10,6;UBERON:0005383,6.51e-10,3;UBERON:0005382,6.51e-10,3;UBERON:0001872,1.52e-09,5;UBERON:0002021,2.11e-09,5;UBERON:0001870,3.43e-09,3;UBERON:0001896,9.79e-09,3;UBERON:0005290,9.79e-09,3;UBERON:0010096,9.79e-09,3;UBERON:0002680,1.77e-07,9;UBERON:0001895,1.77e-07,9;UBERON:0010092,1.77e-07,9;UBERON:0001873,4.65e-07,2;UBERON:0010122,4.65e-07,2;UBERON:0001876,4.93e-07,2;UBERON:0002702,9.86e-07,2 | |||
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| ||
|short_description=p3@LAMP5 | |||
}} | }} |
Latest revision as of 17:34, 17 September 2015
Short description: | p3@LAMP5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_LAMP5_5end |
Coexpression cluster: | C2627_biphenotypic_acute_putamen_caudate_Dendritic_hippocampus_amygdala |
Association with transcript: | 0bp_to_ENST00000427562, uc002wni.1, uc010zrc.1_5end |
EntrezGene: | LAMP5 |
HGNC: | 16097 |
UniProt: | Q9UJQ1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
plasmacytoid dendritic cell | 2.38e-10 | 3 |