FFCP PHASE1:Hg19::chr22:21771656..21771662,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr22:21771656..21771662,+ to FFCP PHASE1:Hg19::chr22:21771656..21771662,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=23119 | |EntrezGene=23119 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18595 | |HGNC=18595 | ||
|TSSclassifier=strong | |||
|UniProt=Q96JB3 | |UniProt=Q96JB3 | ||
|association_with_transcript=-30bp_to_ENST00000407464,NM_015094,uc002zur.3_5end | |||
|cluster_id=chr22:21771656..21771662,+ | |||
|description=CAGE_peak_1_at_HIC2_5end | |||
|id=chr22:21771656..21771662,+ | |||
|ontology_enrichment_celltype=CL:0002057!1.83e-31!42;CL:0000860!2.45e-28!45;CL:0000557!9.38e-25!71;CL:0000839!3.15e-24!70;CL:0000763!1.27e-23!112;CL:0000049!1.27e-23!112;CL:0000766!5.74e-23!76;CL:0002009!2.89e-21!65;CL:0002194!9.23e-20!63;CL:0000576!9.23e-20!63;CL:0000040!9.23e-20!63;CL:0000559!9.23e-20!63;CL:0002032!4.61e-17!165;CL:0000837!4.61e-17!165;CL:0000037!7.90e-17!172;CL:0000566!7.90e-17!172;CL:0000738!1.49e-16!140;CL:0002031!3.14e-16!124;CL:0000988!1.36e-14!182;CL:0002087!5.91e-11!119 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.12e-36;33!CL:0002057;2.12e-36;33!CL:0000473;5.29e-29;39!CL:0000234;5.29e-29;39!CL:0000576;4.23e-23;48!CL:0000766;1.91e-17;69!CL:0000763;6.72e-10;100!CL:0000453;5.07e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.35e-43,42;CL:0002057,1.35e-43,42;CL:0000473,1.74e-42,48;CL:0000234,1.74e-42,48;CL:0000557,1.23e-38,67;CL:0000839,6.98e-38,66;CL:0000766,1.70e-33,72;CL:0002009,1.98e-33,61;CL:0000763,4.55e-33,108;CL:0000049,4.55e-33,108;CL:0002194,3.29e-31,59;CL:0000576,3.29e-31,59;CL:0000040,3.29e-31,59;CL:0000559,3.29e-31,59;CL:0002031,4.35e-20,120;CL:0000037,7.32e-20,168;CL:0000738,7.95e-20,136;CL:0002032,9.63e-20,161;CL:0000837,9.63e-20,161;CL:0000988,6.62e-18,177;CL:0002087,2.91e-13,115;CL:0000453,5.62e-08,5;CL:0000134,1.13e-07,354;CL:0002320,3.70e-07,361 | |||
|ontology_enrichment_development_v019=CL:0002057;4.15e-31;42!CL:0000049;7.64e-11;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!4.25e-22!80;UBERON:0001474!4.10e-20!86;UBERON:0004765!4.63e-16!101;UBERON:0001434!4.63e-16!101;UBERON:0002390!5.75e-15!102;UBERON:0003061!5.75e-15!102;UBERON:0002193!4.73e-14!112;UBERON:0002405!8.50e-14!115;UBERON:0002204!2.36e-08!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,8.47e-34,76;UBERON:0001474,3.39e-30,82;UBERON:0004765,2.48e-27,90;UBERON:0002405,7.92e-25,93;UBERON:0001434,4.52e-23,100;UBERON:0002390,8.47e-23,98;UBERON:0003061,8.47e-23,98;UBERON:0002193,2.49e-19,108;UBERON:0002204,1.27e-12,167;UBERON:0003081,1.31e-07,203 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34465029290355,0,1.46062018077475,0.975865597581014,0,0,0,0,0,0,0,0,0,0.786728553697808,0.383829398097213,5.41856431606266,0,0,0,0,0,2.05520307534393,0,0,0,0,0,0,2.32637182047304,3.40088349319928,3.39617685662943,2.55671940596253,4.93401465626191,7.43295290148249,2.01384674625505,1.5369642391746,3.31075121844019,2.41321976515633,1.93645405075148,1.35426486594342,3.38836211176688,4.09359225086769,3.59557575112135,3.67300670845083,2.24650318953266,5.75403413219137,2.63881040149373,1.39624560335142,2.55734850319616,2.90209238628584,2.26954089876456,3.73693349397345,3.01498398308092,1.5644487552606,3.69221035998698,1.21079900526674,2.94622108790052,3.48108626184973,3.59133986730301,4.889898899196,3.77385561915077,2.80821577866238,4.6554836780867,3.53596290733576,1.14005097496499,6.16641699317179,5.47992461293902,0,0,0.889509253863555,0.426730222566507,0.800791974072025,1.72425731986345,0,0,0,0,0,0,1.68152568894461,3.423993102076,0,0,0,2.34061093546949,2.28145586643513,1.4203434172042,3.89653456815823,1.44833593950726,3.53527088969805,5.75988125917415,2.97884250141517,1.40900451698243,1.8208308658383,1.97325485524411,1.38175008892924,2.60822777161547,2.66915813691709,9.89901063931938,4.18142095219907,1.58633079776593,0.766440987203842,2.74901956386104,4.80737414837055,0,0.651083453856419,0.950452044448374,2.55977702432214,0.895906278080929,0,0.236777252044017,0,0,0,0,0,0,0.511450247374121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238490624305342,0,2.60020250930695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.9534125230819,0,0,0,0.12663051166458,3.44263870114369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.35021065793013,0,0,0,1.77810662500693,0,0,0,0,0,0,0,0,0,0,2.01856680700503,5.83963774521328,0,0,0,0,0,0.473227200159376,0.505754070234305,0.723033089650446,0.441175890929576,0.217879444092406,0.237270619111097,0.674156540800822,0.784885860501384,0.38474715694639,0,0,0,0,0,0,0,0,0,0.857839051492628,0,0,0,0,0,0,0,1.73895607462615,1.05667824812239,0,0.925971025153221,0.570762456703795,0,0,0,0,0,0,0.503946384596579,1.13420077793909,0,0,0,0,1.32072651019839,9.12243708379397,5.90891809009542,6.43836410474538,0.571481048629521,0,0,0,0.102827492703324,0.600686115687835,2.28661146104463,0,0,0,0,0,2.535908257668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,1.00451418286425,2.10833939483032,0,0,2.85273810081437,0,0,0,0,0.197030760201927,0,0,0,0,0,0,1.27587750330633,0,0,0,0,0,0,1.24782516918484,1.24900292158013,1.73472656537328,1.28855556491985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.60885354589706,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.94667777962682,4.96727356947311,0,0,0,0,0.0915694648183434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.23212121227795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,3.9353685122798,0,0,0,1.43411352204052,0.491245205065606,0,0,0,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0.383010740264733,0,2.27235358192189,0.280797178113459,0,0,20.0507581672054,4.57087800064329,0.1605880751037,0,0,0,0,0,0,0,0,0,4.59774653409171,0,0,0,0.146508179271894,0.121360521749513,0,0,11.2209907826714,3.56357616999166,0,4.97073823883149,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236387681767936,0,0,0,2.65722415744152,0.120596438625408,12.2065389053667,0,0,0,0,0,0.0769502585037971,0,0.23056390438806,0,0,8.61303131276183,2.74792780205587,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0.135904206073614,0,0,0,2.40168115483916,0,2.55493176133945,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0.0674035438541849,0,0,3.18091875923721,0,4.50108815702054,3.30094647833361,5.40072439437941,4.27450393947851,2.32140586367385,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.58565912723101,0,0.171086837884329,0,0,0,0,0,0,0,0,0.544017803369474,0.7520696820681,2.14441903734423,0.983617892129413,0,3.54427271986794,2.80660409274515,0,4.0138643698305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.889811221596536,0,0,0,0,0,3.14862178514523,0,2.48823724704513,0,3.65221543268214,0,1.90402606084398,0,0,0,3.71227007902795,2.78667122089031,0,2.06037423109676,2.35724642136143,2.52369796457302,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.48178710330594,4.38453973034098,2.78061170234935,0,0,0,0,0,0,0,0,0.419638523158333,1.24415452006595,0,0.107824811396682,0.157265941855896,0,0,0,0,0,0,0,0,0,0,0,4.25089728976755,0,0,0,0.0691572524642179,0,14.2769420259154,0,0,0,0,0,0,0,0,0,0,0,0,0.147856086217045,0.0675375846183947,4.68646859168308,0.413373593002368,0,0,0,0,0,0,10.7140367175657,0,6.67662164660295,0,0,0,0,0,0,0,0,0,0,0,0.913158720509496,0,0.47775168788705,0,0.158013611732727,0,0,0,0,0,0,0,0,0,0,0,3.72247662797184,0.955538938977433,0,0,0,7.12171720906684,0,1.1598144313382,0,0,0,0,0.11294608203896,0,0,0,0,0,0,0,3.92616934229891,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0.2507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| ||
|short_description=p1@HIC2 | |||
}} | }} |
Latest revision as of 06:09, 19 September 2015
Short description: | p1@HIC2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_HIC2_5end |
Coexpression cluster: | NA |
Association with transcript: | -30bp_to_ENST00000407464, NM_015094, uc002zur.3_5end |
EntrezGene: | HIC2 |
HGNC: | 18595 |
UniProt: | Q96JB3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.35e-43 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.35e-43 | 42 |
defensive cell | 1.74e-42 | 48 |
phagocyte | 1.74e-42 | 48 |
granulocyte monocyte progenitor cell | 1.23e-38 | 67 |
myeloid lineage restricted progenitor cell | 6.98e-38 | 66 |
myeloid leukocyte | 1.70e-33 | 72 |
macrophage dendritic cell progenitor | 1.98e-33 | 61 |
myeloid cell | 4.55e-33 | 108 |
common myeloid progenitor | 4.55e-33 | 108 |
monopoietic cell | 3.29e-31 | 59 |
monocyte | 3.29e-31 | 59 |
monoblast | 3.29e-31 | 59 |
promonocyte | 3.29e-31 | 59 |
hematopoietic lineage restricted progenitor cell | 4.35e-20 | 120 |
hematopoietic stem cell | 7.32e-20 | 168 |
leukocyte | 7.95e-20 | 136 |
hematopoietic oligopotent progenitor cell | 9.63e-20 | 161 |
hematopoietic multipotent progenitor cell | 9.63e-20 | 161 |
hematopoietic cell | 6.62e-18 | 177 |
nongranular leukocyte | 2.91e-13 | 115 |
Langerhans cell | 5.62e-08 | 5 |
mesenchymal cell | 1.13e-07 | 354 |
connective tissue cell | 3.70e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 8.47e-34 | 76 |
bone element | 3.39e-30 | 82 |
skeletal element | 2.48e-27 | 90 |
immune system | 7.92e-25 | 93 |
skeletal system | 4.52e-23 | 100 |
hematopoietic system | 8.47e-23 | 98 |
blood island | 8.47e-23 | 98 |
hemolymphoid system | 2.49e-19 | 108 |
musculoskeletal system | 1.27e-12 | 167 |
lateral plate mesoderm | 1.31e-07 | 203 |