FFCP PHASE1:Hg19::chr3:58810185..58810229,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr3:58810185..58810229,+ to FFCP PHASE1:Hg19::chr3:58810185..58810229,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000463703,ENST00000482372,uc003dku.1_5end | |||
|cluster_id=chr3:58810185..58810229,+ | |||
|coexpression_cluster_id=C1482 | |||
|description=CAGE_peak_1_at_ENST00000463703_5end,CAGE_peak_1_at_ENST00000482372_5end,CAGE_peak_1_at_uc003dku.1_5end | |||
|id=chr3:58810185..58810229,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;4.11e-18;82!UBERON:0010122;8.60e-12;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.55e-65!57;UBERON:0005068!1.55e-65!57;UBERON:0006241!1.55e-65!57;UBERON:0007135!1.55e-65!57;UBERON:0002780!2.26e-59!41;UBERON:0001890!2.26e-59!41;UBERON:0006240!2.26e-59!41;UBERON:0003080!1.00e-57!42;UBERON:0002020!1.63e-56!34;UBERON:0003528!1.63e-56!34;UBERON:0001893!2.24e-56!34;UBERON:0002791!2.43e-54!33;UBERON:0002616!5.16e-54!59;UBERON:0001869!6.97e-53!32;UBERON:0001017!1.69e-52!82;UBERON:0005743!1.08e-51!86;UBERON:0000073!1.05e-49!94;UBERON:0001016!1.05e-49!94;UBERON:0000955!8.55e-49!69;UBERON:0006238!8.55e-49!69;UBERON:0003075!2.54e-45!86;UBERON:0007284!2.54e-45!86;UBERON:0002346!7.88e-45!90;UBERON:0002619!2.66e-44!22;UBERON:0001950!6.52e-40!20;UBERON:0003056!7.59e-39!61;UBERON:0000956!2.30e-38!25;UBERON:0000203!2.30e-38!25;UBERON:0007023!1.49e-32!115;UBERON:0000033!1.19e-28!123;UBERON:0000924!3.20e-27!173;UBERON:0006601!3.20e-27!173;UBERON:0004121!6.01e-27!169;UBERON:0000153!1.08e-26!129;UBERON:0007811!1.08e-26!129;UBERON:0002420!3.90e-20!9;UBERON:0007245!3.90e-20!9;UBERON:0010009!3.90e-20!9;UBERON:0010011!3.90e-20!9;UBERON:0000454!3.90e-20!9;UBERON:0002308!1.40e-19!9;UBERON:0000125!1.40e-19!9;UBERON:0009663!1.03e-15!7;UBERON:0000200!4.32e-14!6;UBERON:0001871!5.24e-14!7;UBERON:0000025!9.88e-13!194;UBERON:0000349!1.36e-12!5;UBERON:0002021!1.65e-11!5;UBERON:0001872!2.10e-11!5;UBERON:0000369!1.73e-10!4;UBERON:0002435!1.73e-10!4;UBERON:0000204!1.73e-10!4;UBERON:0010082!1.73e-10!4;UBERON:0003076!5.35e-10!15;UBERON:0003057!5.35e-10!15;UBERON:0002298!2.78e-09!8;UBERON:0004111!1.77e-08!241;UBERON:0005383!2.41e-08!3;UBERON:0005382!2.41e-08!3;UBERON:0002771!3.83e-08!3;UBERON:0000988!1.96e-07!3;UBERON:0000064!3.60e-07!219;UBERON:0006331!3.91e-07!3;UBERON:0000475!3.95e-07!365;UBERON:0002240!5.59e-07!3;UBERON:0000483!9.16e-07!309 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;5.76e-81;32!UBERON:0003528;1.07e-78;34!UBERON:0002020;1.07e-78;34!UBERON:0001893;7.77e-76;34!UBERON:0002619;1.94e-75;22!UBERON:0002791;1.94e-75;32!UBERON:0000956;3.08e-66;25!UBERON:0000203;3.08e-66;25!UBERON:0001950;7.89e-66;20!UBERON:0002780;9.54e-64;41!UBERON:0001890;9.54e-64;41!UBERON:0000073;1.72e-45;53!UBERON:0002616;1.72e-45;53!UBERON:0001017;3.31e-31;75!UBERON:0000955;1.49e-30;68!UBERON:0000200;6.10e-30;6!UBERON:0002420;7.59e-28;9!UBERON:0007245;7.59e-28;9!UBERON:0010009;7.59e-28;9!UBERON:0010011;7.59e-28;9!UBERON:0000454;7.59e-28;9!UBERON:0000125;6.16e-27;9!UBERON:0002308;6.16e-27;9!UBERON:0000349;2.35e-26;5!UBERON:0001016;3.17e-22;83!UBERON:0000369;1.18e-21;4!UBERON:0002435;1.18e-21;4!UBERON:0000204;1.18e-21;4!UBERON:0001871;1.15e-18;6!UBERON:0009663;1.48e-18;7!UBERON:0005383;7.17e-17;3!UBERON:0005382;7.17e-17;3!UBERON:0001870;3.07e-16;3!UBERON:0002021;4.55e-16;5!UBERON:0001872;6.89e-16;5!UBERON:0000988;5.04e-15;3!UBERON:0007023;1.85e-14;114!UBERON:0001873;8.60e-12;2!UBERON:0001876;9.07e-12;2!UBERON:0000007;1.09e-11;2!UBERON:0002771;1.45e-11;2!UBERON:0001954;1.45e-11;2!UBERON:0003022;1.45e-11;2!UBERON:0002421;1.45e-11;2!UBERON:0002600;1.45e-11;2!UBERON:0002702;2.57e-11;2!UBERON:0002148;1.36e-10;2!UBERON:0006331;1.36e-10;2!UBERON:0009662;1.36e-10;2!UBERON:0011216;3.15e-10;132!UBERON:0002298;9.21e-08;6!UBERON:0010314;1.05e-07;132!UBERON:0001894;3.67e-07;7!UBERON:0001874;8.80e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003528,2.70e-92,34;UBERON:0002020,2.70e-92,34;UBERON:0001869,6.65e-91,32;UBERON:0002780,3.95e-89,41;UBERON:0001890,3.95e-89,41;UBERON:0003080,3.95e-89,41;UBERON:0006240,3.95e-89,41;UBERON:0001893,2.15e-85,34;UBERON:0001049,2.67e-84,56;UBERON:0005068,2.67e-84,56;UBERON:0006241,2.67e-84,56;UBERON:0007135,2.67e-84,56;UBERON:0002791,1.06e-83,32;UBERON:0000073,1.25e-83,53;UBERON:0002616,1.25e-83,53;UBERON:0002619,2.31e-75,22;UBERON:0000955,5.03e-72,68;UBERON:0006238,5.03e-72,68;UBERON:0001017,9.05e-68,81;UBERON:0000956,3.60e-66,25;UBERON:0000203,3.60e-66,25;UBERON:0001950,9.74e-66,20;UBERON:0001016,1.78e-60,89;UBERON:0003056,1.98e-58,61;UBERON:0003075,7.56e-56,82;UBERON:0007284,7.56e-56,82;UBERON:0002346,5.60e-53,86;UBERON:0007023,2.14e-47,114;UBERON:0010371,9.12e-43,104;UBERON:0010314,1.02e-34,132;UBERON:0000200,7.12e-30,6;UBERON:0004121,1.00e-28,171;UBERON:0000924,1.00e-28,171;UBERON:0006601,1.00e-28,171;UBERON:0002420,7.61e-28,9;UBERON:0007245,7.61e-28,9;UBERON:0010009,7.61e-28,9;UBERON:0010011,7.61e-28,9;UBERON:0000454,7.61e-28,9;UBERON:0000125,7.50e-27,9;UBERON:0002308,7.50e-27,9;UBERON:0000349,1.77e-26,5;UBERON:0011216,6.89e-22,223;UBERON:0000369,1.04e-21,4;UBERON:0002435,1.04e-21,4;UBERON:0000204,1.04e-21,4;UBERON:0010082,1.04e-21,4;UBERON:0000025,3.15e-20,192;UBERON:0001871,1.20e-18,6;UBERON:0009663,1.60e-18,7;UBERON:0005383,7.18e-17,3;UBERON:0005382,7.18e-17,3;UBERON:0001870,3.41e-16,3;UBERON:0002021,5.03e-16,5;UBERON:0001872,6.64e-16,5;UBERON:0004111,7.33e-15,240;UBERON:0000988,8.04e-15,3;UBERON:0001876,8.17e-12,2;UBERON:0001873,8.61e-12,2;UBERON:0010122,8.61e-12,2;UBERON:0000007,1.06e-11,2;UBERON:0001954,1.38e-11,2;UBERON:0003022,1.38e-11,2;UBERON:0002421,1.38e-11,2;UBERON:0002600,1.38e-11,2;UBERON:0002771,1.53e-11,2;UBERON:0002702,3.00e-11,2;UBERON:0002148,1.58e-10,2;UBERON:0006331,1.58e-10,2;UBERON:0009662,1.58e-10,2;UBERON:0000483,3.20e-10,306;UBERON:0000119,4.67e-10,309;UBERON:0002298,1.16e-07,6;UBERON:0001894,3.68e-07,7;UBERON:0006222,3.68e-07,7;UBERON:0001874,8.81e-07,1 | |||
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| ||
|short_description=p1@ENST00000463703,p1@ENST00000482372,p1@uc003dku.1 | |||
}} | }} |
Latest revision as of 23:00, 29 July 2015
Short description: | p1@ENST00000463703, p1@ENST00000482372, p1@uc003dku.1 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000463703_5end, CAGE_peak_1_at_ENST00000482372_5end, CAGE_peak_1_at_uc003dku.1_5end |
Coexpression cluster: | C1482_caudate_anaplastic_putamen_thalamus_small_diencephalon_nucleus |
Association with transcript: | 0bp_to_ENST00000463703, ENST00000482372, uc003dku.1_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data