FFCP PHASE1:Hg19::chr4:41362673..41362686,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr4:41362673..41362686,+ to FFCP PHASE1:Hg19::chr4:41362673..41362686,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=22998 | |EntrezGene=22998 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29191 | |HGNC=29191 | ||
|TSSclassifier=strong | |||
|UniProt=D6RJ93 | |UniProt=D6RJ93 | ||
|association_with_transcript=25bp_to_ENST00000509638_5end | |||
|cluster_id=chr4:41362673..41362686,+ | |||
|description=CAGE_peak_13_at_LIMCH1_5end | |||
|id=chr4:41362673..41362686,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;8.69e-15;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.31e-36!115;UBERON:0005743!1.75e-35!86;UBERON:0001049!1.52e-33!57;UBERON:0005068!1.52e-33!57;UBERON:0006241!1.52e-33!57;UBERON:0007135!1.52e-33!57;UBERON:0000073!1.73e-33!94;UBERON:0001016!1.73e-33!94;UBERON:0001017!1.02e-32!82;UBERON:0003075!2.89e-30!86;UBERON:0007284!2.89e-30!86;UBERON:0002346!1.03e-28!90;UBERON:0002780!1.08e-28!41;UBERON:0001890!1.08e-28!41;UBERON:0006240!1.08e-28!41;UBERON:0000955!8.01e-28!69;UBERON:0006238!8.01e-28!69;UBERON:0003080!1.22e-27!42;UBERON:0001893!4.39e-27!34;UBERON:0002616!1.02e-26!59;UBERON:0002020!1.37e-26!34;UBERON:0003528!1.37e-26!34;UBERON:0002791!4.41e-26!33;UBERON:0001869!2.85e-25!32;UBERON:0003056!3.72e-21!61;UBERON:0001950!1.80e-19!20;UBERON:0000956!2.42e-19!25;UBERON:0000203!2.42e-19!25;UBERON:0002619!3.69e-19!22;UBERON:0004121!9.10e-19!169;UBERON:0000924!3.28e-18!173;UBERON:0006601!3.28e-18!173;UBERON:0000153!4.39e-18!129;UBERON:0007811!4.39e-18!129;UBERON:0000033!4.21e-17!123;UBERON:0000475!3.27e-15!365;UBERON:0000025!7.91e-15!194;UBERON:0000477!8.26e-14!286;UBERON:0004111!2.26e-13!241;UBERON:0000483!7.10e-12!309;UBERON:0000481!7.80e-12!347;UBERON:0000119!1.91e-11!312;UBERON:0002420!2.23e-09!9;UBERON:0007245!2.23e-09!9;UBERON:0010009!2.23e-09!9;UBERON:0010011!2.23e-09!9;UBERON:0000454!2.23e-09!9;UBERON:0000064!6.20e-09!219;UBERON:0002308!1.07e-08!9;UBERON:0000125!1.07e-08!9;UBERON:0000062!5.47e-08!511;UBERON:0000468!9.60e-08!659;UBERON:0000200!2.59e-07!6;UBERON:0009663!2.75e-07!7;UBERON:0003076!3.03e-07!15;UBERON:0003057!3.03e-07!15;UBERON:0000467!3.12e-07!625;UBERON:0001871!3.81e-07!7;UBERON:0000480!3.83e-07!626 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;1.38e-52;22!UBERON:0001950;3.90e-52;20!UBERON:0000956;7.16e-46;25!UBERON:0000203;7.16e-46;25!UBERON:0001893;5.27e-43;34!UBERON:0001869;1.35e-41;32!UBERON:0002791;2.12e-41;32!UBERON:0003528;1.23e-39;34!UBERON:0002020;1.23e-39;34!UBERON:0002780;1.60e-36;41!UBERON:0001890;1.60e-36;41!UBERON:0000073;5.11e-29;53!UBERON:0002616;5.11e-29;53!UBERON:0001017;5.13e-22;75!UBERON:0000955;1.19e-20;68!UBERON:0000200;6.11e-19;6!UBERON:0001016;6.65e-18;83!UBERON:0001871;5.53e-17;6!UBERON:0002021;3.55e-16;5!UBERON:0007023;1.37e-11;114!UBERON:0000349;4.83e-11;5!UBERON:0001872;1.13e-10;5!UBERON:0001870;1.57e-10;3!UBERON:0002420;5.56e-09;9!UBERON:0007245;5.56e-09;9!UBERON:0010009;5.56e-09;9!UBERON:0010011;5.56e-09;9!UBERON:0000454;5.56e-09;9!UBERON:0002298;2.67e-08;6!UBERON:0001876;4.72e-08;2!UBERON:0011216;1.18e-07;132!UBERON:0005162;1.30e-07;2!UBERON:0000122;1.30e-07;2!UBERON:0002771;1.94e-07;2!UBERON:0002702;1.94e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,6.25e-53,56;UBERON:0005068,6.25e-53,56;UBERON:0006241,6.25e-53,56;UBERON:0007135,6.25e-53,56;UBERON:0002619,9.34e-53,22;UBERON:0001893,2.06e-52,34;UBERON:0001950,2.17e-52,20;UBERON:0002780,1.29e-49,41;UBERON:0001890,1.29e-49,41;UBERON:0003080,1.29e-49,41;UBERON:0006240,1.29e-49,41;UBERON:0001017,2.01e-49,81;UBERON:0000073,2.93e-49,53;UBERON:0002616,2.93e-49,53;UBERON:0003528,6.73e-48,34;UBERON:0002020,6.73e-48,34;UBERON:0001869,2.93e-47,32;UBERON:0002791,6.64e-47,32;UBERON:0001016,2.39e-46,89;UBERON:0000956,5.07e-46,25;UBERON:0000203,5.07e-46,25;UBERON:0000955,1.36e-44,68;UBERON:0006238,1.36e-44,68;UBERON:0003075,5.78e-41,82;UBERON:0007284,5.78e-41,82;UBERON:0007023,2.17e-39,114;UBERON:0002346,1.22e-38,86;UBERON:0003056,5.44e-34,61;UBERON:0010371,2.21e-30,104;UBERON:0010314,1.84e-28,132;UBERON:0004121,5.83e-25,171;UBERON:0000924,5.83e-25,171;UBERON:0006601,5.83e-25,171;UBERON:0011216,7.26e-20,223;UBERON:0000200,4.71e-19,6;UBERON:0000025,1.38e-18,192;UBERON:0001871,4.78e-17,6;UBERON:0002021,4.23e-16,5;UBERON:0004111,1.17e-14,240;UBERON:0000349,3.69e-11,5;UBERON:0001872,6.48e-11,5;UBERON:0000483,8.45e-11,306;UBERON:0000119,1.36e-10,309;UBERON:0001870,1.54e-10,3;UBERON:0002420,5.16e-09,9;UBERON:0007245,5.16e-09,9;UBERON:0010009,5.16e-09,9;UBERON:0010011,5.16e-09,9;UBERON:0000454,5.16e-09,9;UBERON:0001876,3.89e-08,2;UBERON:0002298,4.67e-08,6;UBERON:0005162,7.86e-08,2;UBERON:0000122,7.86e-08,2;UBERON:0002771,1.84e-07,2;UBERON:0002702,1.90e-07,2 | |||
|phase1_expression=0.363356758541113,0.428201047781966,0.140954404095971,0,0,0,0,0,0,0,1.39560233594486,0,0,0,0,0,0,0,0,0,0,0.313454721478088,0.572471974262113,0,0.753255837568817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320929027076094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.255725123687061,0.361439152384566,0,0.289693037921647,0,0,0,0,0,0.523916301990851,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0.44905874525234,0,0,0,0,0,0,0,0,0.506522046658319,0,0,0,0,0,0.24666754841716,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213557388818567,0.211931901159562,0,0,0.257640540045629,0,0.168776332241266,0.389748020644795,0,0.276149695926898,0.161646056818812,0.355009592516614,0.302256294682921,0,0,0,0,0,0,0,0,0,0.36497735907583,0,0,0,0,0,0.236613600079688,0.168584690078102,0,0.441175890929576,0.435758888184812,0.474541238222193,0.134831308160164,0.392442930250692,0,0.738155454624648,0,0,0,0,0,0.590789906681404,0,0.122988438543114,0.514703430895577,0,0,0,0.185176890317059,0,0,0,0.34779121492523,0,0.288732895522148,0.462985512576611,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71072446022705,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0.205476322550383,0.358121926479791,0,0,0,0,0,2.60279707715243,1.54657762555539,0.670065061337395,0,0,0,0,0,0.500170521059677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2276957863045,0.280660094433074,0.640695746278505,2.55853624533352,0.64341568457443,0,0,0,0,0,0,0,0,0,0.229628896329213,0,0.131124414959424,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0.512900250232778,0.656029291399411,0.976135183992909,0.515205058238611,0.0915694648183434,0.165018999841176,0,0,0,0,0,0,0,0,0,0,0.178064071293475,0,0,0.127612712494584,0,0,0.31481234683064,0,1.54016790088044,0.532306030317022,0,0.18532421910392,0.143124886741991,0,0,0,0,0,0,0.78494864019923,0,0,0,0,0,0,0.48763373908959,0,0,0,0,0,0,0,1.31535265576129,0,0,0,0,0.281695602532241,0,0,0.35667105148125,0,0,0,0,0,0,0,0,0.564862804660675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,6.95903353436409,2.81338832821025,0.222617410045812,0,0,0,0,0,0.102268682502155,0,0,0.359473404589307,1.07412704805365,0,0.0986434056369336,0,0,2.90799823828566,1.85536196323703,1.99613798001194,0,0.262379999988587,0,0,0.254253650292766,0,0,0,0.520874984799877,0.885741385813839,0.60298219312704,0,0.774054819518572,0.295547618953547,1.97446857438575,0.32681539055697,0.139423744278603,0,0.683652335082007,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.326465616318295,0,0,0,0.0884575645033392,0,0,0,0,1.7524294574976,0,0.702793337176017,0,0,0,0,0,2.75465485467441,0.379119477770928,0,0.103688191397247,0.664653872707185,0,0,0,0,0,0,0,0,0.34945333648406,0,0.290268993867255,0.438535902517113,0.164230914106418,0.0969890164884194,0,0.677942222341597,0.274083849293502,0,2.40581024632339,0.391102765469606,0.721429382263803,0.426905989478705,0,0,0,0,0,0.248505071130865,0.235694034616795,0,0.209205692624666,0.101998217636322,0,2.40168115483916,0.958337652243951,0,0.429765441419957,0,1.11712960508902,1.83328339209347,0.717873024576814,0.798716001995964,1.71690419254628,3.79391477651183,0.335917362433631,0,0,0,0,0,0.295282444544246,0,0,2.04305109167363,0.160753148465019,0.137539436597234,0,0,0,2.24773359634691,0,0.236417121897595,0.367182116944987,0,0,0,0,3.31045985182716,0,1.08599920350743,0,0,0,0,0,0.339936274560377,0,0,1.55139547633861,0.39669780522807,0.171086837884329,0,0.533937062838473,0.628817220398664,0,0,0,0,0,1.08803560673895,1.0027595760908,0,0.655745261419609,0,2.65820453990096,2.44052529803926,1.251909307065,1.14681839138014,0.332787154610557,1.05563885000352,0.276697269872462,0,0,0,0,0,0.28984205722165,0,0,0,0.189403005275089,0.251567901752575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.385239660814607,0.428883182749851,0.260994291965212,0.226705925512272,0.694567422971502,0.734210113519403,0.179088841081487,0.308801447160972,0.877136198314828,0,0,0.337884881306145,0.256241518587947,0.690860683462397,0,1.38258436151731,0,0.132864840313363,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0.646948868380091,0,0.218419276384028,0,0,0.123935764259002,0,0,0,1.60114149657094,0,0.3062454773532,1.66995985250795,5.6678630530234,1.27707087245721,1.23069818544453,3.27693205088234,1.52145955421279,1.93770774758221,5.71077681036618,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,2.22874029240702,0.781078098613847,2.06686796501184,1.96589011601111,3.28184885410932,1.64477330057155,0.496211178389294,0,0.894336993477167,0,0,0.606965604236632,1.13831095675649,0.0887023701626388,0,1.02892805662451,1.22345519358297,1.64431933907123,0.236387681767936,0.111231401892069,0.549451649953598,0.942693539496011,0,0,0.431855182437243,0,0.571812353413251,0,0,0,0,0,0,0,0.4302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| ||
|short_description=p13@LIMCH1 | |||
}} | }} |
Latest revision as of 19:35, 17 September 2015
Short description: | p13@LIMCH1 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_LIMCH1_5end |
Coexpression cluster: | NA |
Association with transcript: | 25bp_to_ENST00000509638_5end |
EntrezGene: | LIMCH1 |
HGNC: | 29191 |
UniProt: | D6RJ93 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data