FFCP PHASE1:Hg19::chr4:87857474..87857489,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr4:87857474..87857489,+ to FFCP PHASE1:Hg19::chr4:87857474..87857489,+: NSchange) |
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(10 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4299 | |EntrezGene=4299 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7135 | |HGNC=7135 | ||
|TSSclassifier=strong | |||
|UniProt=D6RIZ5 | |UniProt=D6RIZ5 | ||
|association_with_transcript=-72bp_to_ENST00000511442,uc003hqi.1_5end | |||
|cluster_id=chr4:87857474..87857489,+ | |||
|coexpression_cluster_id=C4438 | |||
|description=CAGE_peak_7_at_AFF1_5end | |||
|id=chr4:87857474..87857489,+ | |||
|ontology_enrichment_celltype=CL:0000037!1.57e-26!172;CL:0000566!1.57e-26!172;CL:0000763!3.51e-26!112;CL:0000049!3.51e-26!112;CL:0000557!7.78e-26!71;CL:0002032!9.74e-26!165;CL:0000837!9.74e-26!165;CL:0000839!6.91e-24!70;CL:0002009!3.42e-22!65;CL:0000988!4.39e-22!182;CL:0002031!4.70e-22!124;CL:0002194!3.86e-21!63;CL:0000576!3.86e-21!63;CL:0000040!3.86e-21!63;CL:0000559!3.86e-21!63;CL:0000738!1.35e-19!140;CL:0002087!2.32e-19!119;CL:0000766!6.90e-19!76;CL:0000860!1.80e-15!45;CL:0002057!3.54e-14!42;CL:0000063!8.37e-07!578 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.95e-17;33!CL:0002057;1.95e-17;33!CL:0000473;1.45e-16;39!CL:0000234;1.45e-16;39!CL:0000576;4.22e-12;48!CL:0000766;2.20e-09;69!CL:0000763;3.63e-09;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000557,8.84e-27,67;CL:0000037,1.73e-26,168;CL:0000763,4.72e-26,108;CL:0000049,4.72e-26,108;CL:0002032,2.54e-25,161;CL:0000837,2.54e-25,161;CL:0000839,3.53e-24,66;CL:0000988,7.73e-23,177;CL:0002009,1.64e-22,61;CL:0002031,6.78e-22,120;CL:0002194,2.81e-21,59;CL:0000576,2.81e-21,59;CL:0000040,2.81e-21,59;CL:0000559,2.81e-21,59;CL:0000738,1.08e-19,136;CL:0000766,2.83e-19,72;CL:0002087,4.27e-19,115;CL:0000473,3.13e-17,48;CL:0000234,3.13e-17,48;CL:0000860,7.92e-15,42;CL:0002057,7.92e-15,42 | |||
|ontology_enrichment_development_v019=CL:0002057;7.99e-12;42!CL:0000049;6.12e-08;108 | |||
|ontology_enrichment_disease=DOID:162!1.30e-08!235;DOID:14566!2.71e-08!239;DOID:8692!9.71e-08!31;DOID:2531!5.06e-07!51;DOID:0060083!5.06e-07!51;DOID:1240!5.58e-07!39 | |||
|ontology_enrichment_disease_v019=DOID:8692;8.34e-08;31 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,6.48e-08,31;DOID:1240,6.05e-07,39;DOID:2531,8.28e-07,51;DOID:0060083,8.28e-07,51 | |||
|ontology_enrichment_uberon=UBERON:0002371!4.70e-20!80;UBERON:0002193!1.23e-17!112;UBERON:0002405!2.30e-17!115;UBERON:0001474!2.45e-17!86;UBERON:0002390!2.68e-16!102;UBERON:0003061!2.68e-16!102;UBERON:0004765!4.00e-12!101;UBERON:0001434!4.00e-12!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002405,3.12e-23,93;UBERON:0002371,2.93e-22,76;UBERON:0001474,2.95e-19,82;UBERON:0002193,1.08e-18,108;UBERON:0002390,3.89e-18,98;UBERON:0003061,3.89e-18,98;UBERON:0004765,8.09e-18,90;UBERON:0001434,1.68e-13,100 | |||
|phase1_expression=0.54503513781167,0,0.563817616383885,0,0,0,0,0.631719873426831,0,3.68600904752263,0,1.74753097704138,0,0,0,0.672325146451775,0.602694528023977,0.730310090387373,0.975865597581014,0.123121058076788,0,0.313454721478088,0,0,0,3.20936304141395,2.8735206307481,2.99100968991981,0.786728553697808,0.383829398097213,0.619264493264304,0,0.30120591877825,0.739508020333575,1.54934401160603,7.10846162437108,4.11040615068786,1.10799081706375,1.40381113229099,1.51907609501096,3.58264758783879,7.44955431843653,3.34848237924443,6.25212426752128,5.66813915533214,8.00527401919793,8.36744532860465,11.9238687526329,11.7688420940139,8.63077176966451,8.19714260893122,15.371344942758,7.23965929546899,12.9096936716765,6.77132432971709,6.77672422353377,7.64137220161968,11.2361742222542,2.75475503133812,9.30694178520671,7.67204550958849,6.59702600373432,7.18069167437875,12.3605177654481,2.03146467040009,3.97169657283798,4.35975574296902,11.3061899365534,11.4726242052444,18.2438629552298,4.23779651843358,4.78760926783834,7.91155968602211,0.845021145247767,1.27562579979026,0.419317291016752,1.12328631146495,1.05123824989054,0.48217676009124,1.14005097496499,0.79566670879636,0.547992461293902,0,1.09227722252426,0.889509253863555,6.40095333849761,4.80475184443215,0,0,0,1.1384259382189,0.587237189370939,4.20500550937752,17.1822727152734,6.1655941927969,3.423993102076,3.34406609193516,1.57204305099666,1.64481199199607,2.00623794468814,1.95553359980154,2.8406868344084,1.94826728407911,2.67385096524417,2.65145316727353,4.43067789167242,5.41607727530031,1.79327847615945,2.34106825607781,1.15106533222573,0.552700035571697,0.289803085735052,1.03800594213442,2.94294910898684,0,0.566546713487831,0.766440987203842,2.06176467289578,2.78321661221453,0,0,0,2.10805166708882,2.04778577847069,0,0.236777252044017,0.821127996921047,3.02410114837099,1.87208137048455,1.59306844271079,0,0,0,0,0,0.144846518960824,0.795285947051099,0,0,0,0,1.63723844372141,1.45718115317017,1.48313777113772,13.306443139842,14.4527681958392,6.91381394698099,0.953962497221368,1.71598473234038,3.34311751196608,2.18638648103376,0,2.08284300964557,0,2.09749718104953,1.92582629358047,2.92592953151535,3.10100111003195,7.47109151642091,5.35552980423472,0.402829317109147,2.28081631715554,0,2.94130464276695,0.81014194788176,4.10778750106767,2.2452937262617,3.15312145353302,0,0.949265659568129,1.09921046358244,0,0,0.872188104285069,0,0,2.91300197789081,0.286836620748814,0,0.560677600142307,0,0,0,0.134710672069688,0.163461903113459,1.05950199351452,0.576175924479999,0,0.312160076830321,0.570471821544449,0,0,0,0,0.204154171254893,0,0.103325781175765,0,0,1.82032272387605,0.718618141816238,0,0,0.277064115484183,0,0.30648779579902,0,0.113432183160021,0,0,0,0,0,0,0,0.168776332241266,0.194874010322397,0.252433774244115,0.0920498986422993,0,0.355009592516614,0.201504196455281,0,2.51239109112286,4.36393792945335,4.87567812161307,1.58565817968474,2.65059536642971,3.25343040034651,1.65857688024593,1.00928340350251,1.45990943630332,0,0,0,0,0,2.9576700009961,1.85443159085912,1.44606617930089,1.98529150918309,1.74303555273925,0.71181185733329,2.42696354688296,2.15843611637881,3.46272441251751,0.738155454624648,0,0.8231480226628,0,0,0.982827216677626,0,0,0.368965315629341,0.514703430895577,1.42675371031213,0,0.904760751704678,1.66659201285353,0,0,0,0,0,0.288732895522148,0.925971025153221,0.380508304469197,0,0.858486162094873,5.41677413392274,3.04205544681009,2.52672975890838,1.87467667973554,5.54341023056236,4.67857820899875,0.716468181622786,0.290633938513962,0.766765358330422,70.4508430191199,5.54705134283324,18.4522022831287,21.1856331522933,10.8568492746687,0.126995788584338,0,0,0,0,1.20137223137567,0,0.112131084345361,0,0.4400297149257,0.517086863031111,0,0,0,0,0,0,0,0,0,0,0.65147236858747,0,0,9.94749944296634,1.74306691720059,11.1969750123904,3.64871341923571,3.01354254859276,4.21667878966063,0,0,0,0.579125226670317,0,1.61154866915906,0.224170287987055,2.95546140302891,1.50939302401662,0.898401253958239,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0.356857977594324,0.315404830067869,0.117141414992713,0,0,0,0,0,0.173767228936166,0,0,3.10152039184331,1.2942852049117,1.28073069364133,0,0,0.604780586659361,0,0.61384789315225,0.280660094433074,1.02511319404561,0.511707249066704,0.160853921143607,0,0.308419387605311,0.177561725313127,0,0,0.116210378459959,1.20859449591622,2.6065841139427,0.552485933615378,0.229628896329213,0.546273504020151,0.393373244878272,1.80479845162965,1.69433741629712,0,0,2.63879072232189,1.13733384070897,3.06168669497728,0.431831832204279,0,0.270946437543853,0,2.80363900349542,0,0.223874754722178,1.75407901316748,0.522870902049801,0,0,0,31.4275085525553,0.366277859273374,1.15513299888823,3.44559322797703,1.30012049207304,0,0,0,0.307007349452259,0,0.322260734604821,0.145016693914229,0.170453254832202,0.178064071293475,1.4875642382488,1.34533047155574,14.9306873618663,0.6069466851333,0,0.31481234683064,0.6970372701606,0.616067160352178,0,0,0.18532421910392,0,0.744316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| ||
|short_description=p7@AFF1 | |||
}} | }} |
Latest revision as of 04:38, 19 September 2015
Short description: | p7@AFF1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_AFF1_5end |
Coexpression cluster: | C4438_Mast_placenta_chorionic_mesenchymal_chronic_testicular_mesothelioma |
Association with transcript: | -72bp_to_ENST00000511442, uc003hqi.1_5end |
EntrezGene: | AFF1 |
HGNC: | 7135 |
UniProt: | D6RIZ5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granulocyte monocyte progenitor cell | 8.84e-27 | 67 |
hematopoietic stem cell | 1.73e-26 | 168 |
myeloid cell | 4.72e-26 | 108 |
common myeloid progenitor | 4.72e-26 | 108 |
hematopoietic oligopotent progenitor cell | 2.54e-25 | 161 |
hematopoietic multipotent progenitor cell | 2.54e-25 | 161 |
myeloid lineage restricted progenitor cell | 3.53e-24 | 66 |
hematopoietic cell | 7.73e-23 | 177 |
macrophage dendritic cell progenitor | 1.64e-22 | 61 |
hematopoietic lineage restricted progenitor cell | 6.78e-22 | 120 |
monopoietic cell | 2.81e-21 | 59 |
monocyte | 2.81e-21 | 59 |
monoblast | 2.81e-21 | 59 |
promonocyte | 2.81e-21 | 59 |
leukocyte | 1.08e-19 | 136 |
myeloid leukocyte | 2.83e-19 | 72 |
nongranular leukocyte | 4.27e-19 | 115 |
defensive cell | 3.13e-17 | 48 |
phagocyte | 3.13e-17 | 48 |
classical monocyte | 7.92e-15 | 42 |
CD14-positive, CD16-negative classical monocyte | 7.92e-15 | 42 |
Ontology term | p-value | n |
---|---|---|
immune system | 3.12e-23 | 93 |
bone marrow | 2.93e-22 | 76 |
bone element | 2.95e-19 | 82 |
hemolymphoid system | 1.08e-18 | 108 |
hematopoietic system | 3.89e-18 | 98 |
blood island | 3.89e-18 | 98 |
skeletal element | 8.09e-18 | 90 |
skeletal system | 1.68e-13 | 100 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 6.48e-08 | 31 |
leukemia | 6.05e-07 | 39 |
hematologic cancer | 8.28e-07 | 51 |
immune system cancer | 8.28e-07 | 51 |