FFCP PHASE1:Hg19::chr5:140013275..140013296,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr5:140013275..140013296,- to FFCP PHASE1:Hg19::chr5:140013275..140013296,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=929 | |EntrezGene=929 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1628 | |HGNC=1628 | ||
|TSSclassifier=strong | |||
|UniProt=P08571,D6RD81 | |UniProt=P08571,D6RD81 | ||
|association_with_transcript=0bp_to_ENST00000302014,ENST00000401743,ENST00000512545,NM_001040021,NM_001174104,NM_001174105_5end | |||
|cluster_id=chr5:140013275..140013296,- | |||
|coexpression_cluster_id=C294 | |||
|description=CAGE_peak_4_at_CD14_5end | |||
|id=chr5:140013275..140013296,- | |||
|ontology_enrichment_celltype=CL:0000766!7.40e-54!76;CL:0002057!4.92e-50!42;CL:0002194!6.20e-47!63;CL:0000576!6.20e-47!63;CL:0000040!6.20e-47!63;CL:0000559!6.20e-47!63;CL:0000860!1.36e-45!45;CL:0002009!6.61e-45!65;CL:0000839!2.60e-43!70;CL:0000557!1.99e-42!71;CL:0000763!1.55e-29!112;CL:0000049!1.55e-29!112;CL:0000738!1.25e-28!140;CL:0002087!2.04e-25!119;CL:0002031!5.11e-22!124;CL:0000037!4.38e-19!172;CL:0000566!4.38e-19!172;CL:0002032!3.56e-18!165;CL:0000837!3.56e-18!165;CL:0000988!7.48e-17!182;CL:0002393!1.17e-10!9;CL:0002397!1.17e-10!9;CL:0000094!6.39e-10!8 | |||
|ontology_enrichment_celltype_v019=CL:0000473;5.43e-56;39!CL:0000234;5.43e-56;39!CL:0000860;6.37e-55;33!CL:0002057;6.37e-55;33!CL:0000576;9.93e-48;48!CL:0000766;2.23e-31;69!CL:0000763;5.96e-17;100!CL:0002393;2.82e-15;6!CL:0002397;2.82e-15;6!CL:0002087;6.64e-13;104!CL:0000235;7.92e-12;6!CL:0000738;3.22e-10;136!CL:0002619;9.66e-10;3!CL:0000094;5.20e-08;8!CL:0000226;1.21e-07;3!CL:0000842;1.21e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,4.76e-80,48;CL:0000234,4.76e-80,48;CL:0000766,7.97e-74,72;CL:0002194,4.30e-73,59;CL:0000576,4.30e-73,59;CL:0000040,4.30e-73,59;CL:0000559,4.30e-73,59;CL:0002009,2.48e-70,61;CL:0000860,4.49e-69,42;CL:0002057,4.49e-69,42;CL:0000839,3.74e-64,66;CL:0000557,5.00e-63,67;CL:0000763,5.32e-45,108;CL:0000049,5.32e-45,108;CL:0000738,1.39e-41,136;CL:0002087,7.61e-41,115;CL:0002031,2.31e-33,120;CL:0000037,4.96e-31,168;CL:0000988,9.42e-29,177;CL:0002032,1.11e-28,161;CL:0000837,1.11e-28,161;CL:0000235,6.03e-12,6;CL:0002393,6.80e-10,9;CL:0002397,6.80e-10,9;CL:0002619,9.83e-10,3;CL:0000094,4.44e-08,8;CL:0000134,8.21e-08,354;CL:0000226,1.29e-07,3;CL:0000842,1.29e-07,3;CL:0002320,2.00e-07,361 | |||
|ontology_enrichment_development_v019=CL:0002057;6.82e-49;42!CL:0000049;3.05e-14;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.00e-47!115;UBERON:0002390!3.46e-47!102;UBERON:0003061!3.46e-47!102;UBERON:0002193!8.01e-44!112;UBERON:0002371!1.73e-35!80;UBERON:0001474!1.10e-31!86;UBERON:0002405!6.17e-26!115;UBERON:0004765!2.95e-25!101;UBERON:0001434!2.95e-25!101;UBERON:0003081!6.89e-16!216;UBERON:0001049!7.34e-15!57;UBERON:0005068!7.34e-15!57;UBERON:0006241!7.34e-15!57;UBERON:0007135!7.34e-15!57;UBERON:0003080!2.79e-12!42;UBERON:0002780!1.36e-11!41;UBERON:0001890!1.36e-11!41;UBERON:0006240!1.36e-11!41;UBERON:0000178!1.67e-11!15;UBERON:0000179!1.67e-11!15;UBERON:0000463!1.67e-11!15;UBERON:0002204!2.08e-11!167;UBERON:0002616!7.93e-11!59;UBERON:0003075!2.17e-09!86;UBERON:0007284!2.17e-09!86;UBERON:0001017!2.46e-09!82;UBERON:0001893!2.60e-09!34;UBERON:0000922!3.11e-09!612;UBERON:0005743!3.22e-09!86;UBERON:0002050!5.56e-09!605;UBERON:0005423!5.56e-09!605;UBERON:0000062!7.02e-09!511;UBERON:0002791!8.98e-09!33;UBERON:0000467!9.86e-09!625;UBERON:0000480!1.17e-08!626;UBERON:0000923!1.20e-08!604;UBERON:0005291!1.20e-08!604;UBERON:0006598!1.20e-08!604;UBERON:0002532!1.20e-08!604;UBERON:0000955!1.42e-08!69;UBERON:0006238!1.42e-08!69;UBERON:0002346!1.54e-08!90;UBERON:0002020!2.61e-08!34;UBERON:0003528!2.61e-08!34;UBERON:0000073!4.03e-08!94;UBERON:0001016!4.03e-08!94;UBERON:0000468!6.62e-08!659;UBERON:0001869!8.10e-08!32;UBERON:0000479!1.38e-07!787;UBERON:0003056!4.36e-07!61;UBERON:0002619!5.19e-07!22;UBERON:0001950!1.00e-06!20 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;6.06e-22;15!UBERON:0000179;6.06e-22;15!UBERON:0000463;6.06e-22;15!UBERON:0002390;1.92e-08;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,5.59e-69,98;UBERON:0003061,5.59e-69,98;UBERON:0002193,6.95e-64,108;UBERON:0002371,3.28e-54,76;UBERON:0001474,2.13e-49,82;UBERON:0002405,1.86e-44,93;UBERON:0004765,5.67e-44,90;UBERON:0001434,2.09e-38,100;UBERON:0003081,1.03e-29,203;UBERON:0000178,4.45e-22,15;UBERON:0000179,4.45e-22,15;UBERON:0000463,4.45e-22,15;UBERON:0002204,2.02e-19,167;UBERON:0000926,2.65e-16,315;UBERON:0004120,2.65e-16,315;UBERON:0006603,2.65e-16,315;UBERON:0000923,1.26e-07,560;UBERON:0010316,1.26e-07,560;UBERON:0005291,1.26e-07,560;UBERON:0006598,1.26e-07,560;UBERON:0010317,1.26e-07,560;UBERON:0002532,1.26e-07,560;UBERON:0002050,1.87e-07,564;UBERON:0002384,6.64e-07,371;UBERON:0005423,9.26e-07,581 | |||
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| ||
|short_description=p4@CD14 | |||
}} | }} |
Latest revision as of 02:30, 25 September 2015
Short description: | p4@CD14 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_CD14_5end |
Coexpression cluster: | C294_CD14_Macrophage_Monocytederived_CD14CD16_Neutrophils_Basophils_Peripheral |
Association with transcript: | 0bp_to_ENST00000302014, ENST00000401743, ENST00000512545, NM_001040021, NM_001174104, NM_001174105_5end |
EntrezGene: | CD14 |
HGNC: | 1628 |
UniProt: | P08571D6RD81 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 5.59e-69 | 98 |
blood island | 5.59e-69 | 98 |
hemolymphoid system | 6.95e-64 | 108 |
bone marrow | 3.28e-54 | 76 |
bone element | 2.13e-49 | 82 |
immune system | 1.86e-44 | 93 |
skeletal element | 5.67e-44 | 90 |
skeletal system | 2.09e-38 | 100 |
lateral plate mesoderm | 1.03e-29 | 203 |
blood | 4.45e-22 | 15 |
haemolymphatic fluid | 4.45e-22 | 15 |
organism substance | 4.45e-22 | 15 |
musculoskeletal system | 2.02e-19 | 167 |
mesoderm | 2.65e-16 | 315 |
mesoderm-derived structure | 2.65e-16 | 315 |
presumptive mesoderm | 2.65e-16 | 315 |
germ layer | 1.26e-07 | 560 |
germ layer / neural crest | 1.26e-07 | 560 |
embryonic tissue | 1.26e-07 | 560 |
presumptive structure | 1.26e-07 | 560 |
germ layer / neural crest derived structure | 1.26e-07 | 560 |
epiblast (generic) | 1.26e-07 | 560 |
embryonic structure | 1.87e-07 | 564 |
connective tissue | 6.64e-07 | 371 |
developing anatomical structure | 9.26e-07 | 581 |