FFCP PHASE1:Hg19::chr6:32811888..32811906,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr6:32811888..32811906,+ to FFCP PHASE1:Hg19::chr6:32811888..32811906,+: NSchange) |
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(9 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-3bp_to_,3bp_to_ENST00000413039,ENST00000429600,ENST00000458296_5end | |||
|cluster_id=chr6:32811888..32811906,+ | |||
|coexpression_cluster_id=C451 | |||
|description=CAGE_peak_1_at_ENST00000413039_5end,CAGE_peak_1_at_ENST00000429600_5end,CAGE_peak_1_at_ENST00000458296_5end | |||
|id=chr6:32811888..32811906,+ | |||
|ontology_enrichment_celltype=CL:0000738!1.58e-56!140;CL:0002087!9.19e-52!119;CL:0000037!6.53e-50!172;CL:0000566!6.53e-50!172;CL:0002031!6.40e-48!124;CL:0000988!7.41e-47!182;CL:0002032!1.04e-46!165;CL:0000837!1.04e-46!165;CL:0000766!1.01e-29!76;CL:0002194!1.96e-26!63;CL:0000576!1.96e-26!63;CL:0000040!1.96e-26!63;CL:0000559!1.96e-26!63;CL:0002009!3.59e-26!65;CL:0002057!1.35e-25!42;CL:0000557!1.92e-25!71;CL:0000839!1.11e-24!70;CL:0000860!4.21e-24!45;CL:0000763!2.95e-23!112;CL:0000049!2.95e-23!112;CL:0000542!2.18e-22!53;CL:0000051!2.18e-22!53;CL:0000838!4.00e-22!52;CL:0000134!5.25e-15!358;CL:0002320!3.35e-14!365;CL:0000945!6.37e-12!24;CL:0000826!6.37e-12!24;CL:0000084!2.33e-10!25;CL:0000827!2.33e-10!25;CL:0000219!1.71e-09!390;CL:0000791!3.44e-09!18;CL:0000789!3.44e-09!18;CL:0002420!3.44e-09!18;CL:0002419!3.44e-09!18;CL:0000790!3.44e-09!18;CL:0000236!1.08e-08!14;CL:0000048!7.51e-08!430;CL:0000723!8.21e-07!436 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.02e-20;33!CL:0002057;2.02e-20;33!CL:0000576;2.87e-19;48!CL:0000473;1.05e-17;39!CL:0000234;1.05e-17;39!CL:0002087;1.52e-16;104!CL:0000542;1.33e-14;53!CL:0000766;2.53e-14;69!CL:0000738;1.12e-13;136!CL:0000945;9.89e-13;24!CL:0000084;4.23e-11;25!CL:0000791;8.63e-10;18!CL:0000789;8.63e-10;18!CL:0002419;8.63e-10;18!CL:0000988;2.64e-09;177!CL:0000236;6.21e-09;13!CL:0000763;2.05e-08;100!CL:0000625;4.74e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,2.18e-62,136;CL:0002087,6.62e-58,115;CL:0000037,5.58e-55,168;CL:0002031,9.66e-53,120;CL:0000988,5.96e-52,177;CL:0002032,1.62e-51,161;CL:0000837,1.62e-51,161;CL:0000766,1.13e-33,72;CL:0002194,9.77e-31,59;CL:0000576,9.77e-31,59;CL:0000040,9.77e-31,59;CL:0000559,9.77e-31,59;CL:0002009,2.31e-30,61;CL:0000557,6.17e-29,67;CL:0000473,6.54e-28,48;CL:0000234,6.54e-28,48;CL:0000839,9.39e-28,66;CL:0000860,2.36e-27,42;CL:0002057,2.36e-27,42;CL:0000763,4.87e-26,108;CL:0000049,4.87e-26,108;CL:0000542,6.57e-24,53;CL:0000051,6.57e-24,53;CL:0000838,1.26e-23,52;CL:0000134,1.64e-14,354;CL:0002320,1.92e-13,361;CL:0000945,1.12e-12,24;CL:0000826,1.12e-12,24;CL:0000084,5.34e-11,25;CL:0000827,5.34e-11,25;CL:0000219,6.07e-10,386;CL:0000791,9.57e-10,18;CL:0000789,9.57e-10,18;CL:0002420,9.57e-10,18;CL:0002419,9.57e-10,18;CL:0000790,9.57e-10,18;CL:0000236,3.28e-09,14;CL:0000625,5.01e-07,11;CL:0000048,9.67e-07,427 | |||
|ontology_enrichment_development_v019=CL:0002057;7.33e-20;42!CL:0000051;1.33e-14;53!CL:0000790;8.63e-10;18!CL:0000049;5.00e-08;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.87e-33!102;UBERON:0003061!1.87e-33!102;UBERON:0002193!9.25e-33!112;UBERON:0002371!2.43e-23!80;UBERON:0001474!5.56e-20!86;UBERON:0002405!1.28e-19!115;UBERON:0004765!1.14e-15!101;UBERON:0001434!1.14e-15!101;UBERON:0002384!4.42e-13!375;UBERON:0007023!3.01e-09!115;UBERON:0000178!4.39e-09!15;UBERON:0000179!4.39e-09!15;UBERON:0000463!4.39e-09!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.21e-09;15!UBERON:0000179;1.21e-09;15!UBERON:0000463;1.21e-09;15!UBERON:0002390;4.72e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.53e-37,98;UBERON:0003061,1.53e-37,98;UBERON:0002193,4.15e-37,108;UBERON:0002405,1.53e-28,93;UBERON:0002371,1.56e-26,76;UBERON:0001474,8.44e-22,82;UBERON:0004765,5.30e-18,90;UBERON:0001434,4.87e-16,100;UBERON:0002384,2.44e-12,371;UBERON:0000178,1.24e-09,15;UBERON:0000179,1.24e-09,15;UBERON:0000463,1.24e-09,15;UBERON:0007023,1.25e-08,114;UBERON:0003081,2.57e-07,203 | |||
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| ||
|short_description=p1@ENST00000413039,p1@ENST00000429600,p1@ENST00000458296 | |||
}} | }} |
Latest revision as of 00:29, 31 July 2015
Short description: | p1@ENST00000413039, p1@ENST00000429600, p1@ENST00000458296 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000413039_5end, CAGE_peak_1_at_ENST00000429600_5end, CAGE_peak_1_at_ENST00000458296_5end |
Coexpression cluster: | C451_CD14_CD4_Eosinophils_Neutrophils_adult_Natural_CD8 |
Association with transcript: | -3bp_to_, 3bp_to_ENST00000413039, ENST00000429600, ENST00000458296_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.53e-37 | 98 |
blood island | 1.53e-37 | 98 |
hemolymphoid system | 4.15e-37 | 108 |
immune system | 1.53e-28 | 93 |
bone marrow | 1.56e-26 | 76 |
bone element | 8.44e-22 | 82 |
skeletal element | 5.30e-18 | 90 |
skeletal system | 4.87e-16 | 100 |
connective tissue | 2.44e-12 | 371 |
blood | 1.24e-09 | 15 |
haemolymphatic fluid | 1.24e-09 | 15 |
organism substance | 1.24e-09 | 15 |
adult organism | 1.25e-08 | 114 |
lateral plate mesoderm | 2.57e-07 | 203 |