FFCP PHASE1:Hg19::chr7:132261223..132261236,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr7:132261223..132261236,- to FFCP PHASE1:Hg19::chr7:132261223..132261236,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=91584 | |EntrezGene=91584 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9102 | |HGNC=9102 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000423507_5end | |||
|cluster_id=chr7:132261223..132261236,- | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_2_at_PLXNA4_5end | |||
|id=chr7:132261223..132261236,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000784;6.46e-10;3!CL:0000047;3.26e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000784,6.37e-10,3;CL:0000047,9.48e-10,8 | |||
|ontology_enrichment_development_v019=UBERON:0006601;8.91e-15;82!UBERON:0010122;8.96e-08;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.72e-51!57;UBERON:0005068!2.72e-51!57;UBERON:0006241!2.72e-51!57;UBERON:0007135!2.72e-51!57;UBERON:0001017!3.47e-48!82;UBERON:0005743!1.83e-46!86;UBERON:0000073!2.38e-43!94;UBERON:0001016!2.38e-43!94;UBERON:0002616!1.66e-42!59;UBERON:0007023!8.80e-42!115;UBERON:0002780!1.10e-39!41;UBERON:0001890!1.10e-39!41;UBERON:0006240!1.10e-39!41;UBERON:0000955!3.95e-39!69;UBERON:0006238!3.95e-39!69;UBERON:0003080!1.95e-38!42;UBERON:0003075!7.56e-37!86;UBERON:0007284!7.56e-37!86;UBERON:0002020!2.39e-36!34;UBERON:0003528!2.39e-36!34;UBERON:0001893!2.89e-36!34;UBERON:0002791!7.55e-35!33;UBERON:0001869!1.35e-34!32;UBERON:0002346!2.29e-34!90;UBERON:0002619!7.64e-30!22;UBERON:0001950!2.99e-27!20;UBERON:0000956!2.03e-25!25;UBERON:0000203!2.03e-25!25;UBERON:0003056!5.21e-25!61;UBERON:0004121!5.64e-20!169;UBERON:0000033!4.57e-19!123;UBERON:0000924!4.83e-19!173;UBERON:0006601!4.83e-19!173;UBERON:0000153!3.12e-18!129;UBERON:0007811!3.12e-18!129;UBERON:0000025!2.96e-16!194;UBERON:0003076!1.54e-13!15;UBERON:0003057!1.54e-13!15;UBERON:0002308!2.18e-12!9;UBERON:0000125!2.18e-12!9;UBERON:0002420!2.37e-12!9;UBERON:0007245!2.37e-12!9;UBERON:0010009!2.37e-12!9;UBERON:0010011!2.37e-12!9;UBERON:0000454!2.37e-12!9;UBERON:0004111!3.44e-12!241;UBERON:0000477!8.08e-11!286;UBERON:0004733!1.76e-10!12;UBERON:0002028!1.76e-10!12;UBERON:0007277!1.76e-10!12;UBERON:0009663!5.60e-10!7;UBERON:0000200!8.10e-10!6;UBERON:0004732!1.82e-09!13;UBERON:0001871!2.49e-09!7;UBERON:0002021!1.12e-08!5;UBERON:0001872!1.32e-08!5;UBERON:0002298!3.55e-08!8;UBERON:0000349!5.98e-08!5;UBERON:0000483!2.83e-07!309;UBERON:0002680!3.48e-07!9;UBERON:0001895!3.48e-07!9;UBERON:0010092!3.48e-07!9;UBERON:0000119!4.98e-07!312;UBERON:0000369!4.99e-07!4;UBERON:0002435!4.99e-07!4;UBERON:0000204!4.99e-07!4;UBERON:0010082!4.99e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;2.76e-68;32!UBERON:0003528;8.86e-66;34!UBERON:0002020;8.86e-66;34!UBERON:0002619;1.67e-64;22!UBERON:0002791;6.08e-64;32!UBERON:0001893;6.14e-62;34!UBERON:0001950;1.09e-58;20!UBERON:0002780;5.76e-57;41!UBERON:0001890;5.76e-57;41!UBERON:0000956;2.43e-56;25!UBERON:0000203;2.43e-56;25!UBERON:0000073;3.41e-48;53!UBERON:0002616;3.41e-48;53!UBERON:0000955;1.57e-37;68!UBERON:0001017;6.82e-35;75!UBERON:0001016;4.05e-29;83!UBERON:0000125;2.92e-21;9!UBERON:0002308;2.92e-21;9!UBERON:0002420;3.73e-21;9!UBERON:0007245;3.73e-21;9!UBERON:0010009;3.73e-21;9!UBERON:0010011;3.73e-21;9!UBERON:0000454;3.73e-21;9!UBERON:0000200;1.64e-19;6!UBERON:0002021;3.85e-17;5!UBERON:0001872;5.88e-17;5!UBERON:0001871;3.08e-16;6!UBERON:0009663;4.79e-16;7!UBERON:0000349;1.43e-15;5!UBERON:0000369;1.03e-13;4!UBERON:0002435;1.03e-13;4!UBERON:0000204;1.03e-13;4!UBERON:0002298;1.10e-12;6!UBERON:0002784;3.13e-12;4!UBERON:0004733;1.17e-11;12!UBERON:0002028;1.17e-11;12!UBERON:0007023;2.30e-11;114!UBERON:0011216;7.63e-11;132!UBERON:0004732;1.11e-10;13!UBERON:0005383;1.13e-10;3!UBERON:0005382;1.13e-10;3!UBERON:0001870;1.61e-10;3!UBERON:0001894;1.92e-10;7!UBERON:0000988;3.92e-10;3!UBERON:0002680;1.68e-08;9!UBERON:0001895;1.68e-08;9!UBERON:0001873;8.96e-08;2!UBERON:0002702;1.28e-07;2!UBERON:0002771;1.67e-07;2!UBERON:0001954;2.26e-07;2!UBERON:0003022;2.26e-07;2!UBERON:0002421;2.26e-07;2!UBERON:0002600;2.26e-07;2!UBERON:0010314;3.01e-07;132!UBERON:0001905;3.26e-07;2!UBERON:0002757;3.26e-07;2!UBERON:0010134;3.26e-07;2!UBERON:0005408;3.26e-07;2!UBERON:0001899;3.26e-07;2!UBERON:0002148;5.89e-07;2!UBERON:0006331;5.89e-07;2!UBERON:0009662;5.89e-07;2!UBERON:0001876;7.76e-07;2!UBERON:0001875;7.76e-07;2!UBERON:0006514;7.76e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.05e-90,53;UBERON:0002616,1.05e-90,53;UBERON:0001049,8.81e-90,56;UBERON:0005068,8.81e-90,56;UBERON:0006241,8.81e-90,56;UBERON:0007135,8.81e-90,56;UBERON:0001017,9.56e-90,81;UBERON:0001016,3.59e-83,89;UBERON:0002780,2.97e-81,41;UBERON:0001890,2.97e-81,41;UBERON:0003080,2.97e-81,41;UBERON:0006240,2.97e-81,41;UBERON:0000955,5.32e-79,68;UBERON:0006238,5.32e-79,68;UBERON:0001869,3.51e-77,32;UBERON:0003528,5.01e-77,34;UBERON:0002020,5.01e-77,34;UBERON:0001893,2.65e-72,34;UBERON:0002791,1.57e-71,32;UBERON:0002619,7.53e-65,22;UBERON:0001950,4.44e-59,20;UBERON:0003075,3.02e-58,82;UBERON:0007284,3.02e-58,82;UBERON:0000956,1.21e-56,25;UBERON:0000203,1.21e-56,25;UBERON:0002346,4.55e-55,86;UBERON:0003056,4.87e-52,61;UBERON:0010371,9.08e-44,104;UBERON:0004121,3.71e-38,171;UBERON:0000924,3.71e-38,171;UBERON:0006601,3.71e-38,171;UBERON:0007023,6.44e-37,114;UBERON:0010314,3.69e-34,132;UBERON:0011216,2.89e-29,223;UBERON:0000025,1.66e-22,192;UBERON:0000125,2.93e-21,9;UBERON:0002308,2.93e-21,9;UBERON:0002420,3.45e-21,9;UBERON:0007245,3.45e-21,9;UBERON:0010009,3.45e-21,9;UBERON:0010011,3.45e-21,9;UBERON:0000454,3.45e-21,9;UBERON:0000200,9.53e-20,6;UBERON:0002021,3.12e-17,5;UBERON:0001872,4.47e-17,5;UBERON:0001871,2.09e-16,6;UBERON:0009663,5.34e-16,7;UBERON:0004111,7.83e-16,240;UBERON:0000349,1.23e-15,5;UBERON:0000369,1.29e-13,4;UBERON:0002435,1.29e-13,4;UBERON:0000204,1.29e-13,4;UBERON:0010082,1.29e-13,4;UBERON:0002298,7.79e-13,6;UBERON:0002784,2.78e-12,4;UBERON:0003076,7.06e-12,15;UBERON:0003057,7.06e-12,15;UBERON:0004733,1.05e-11,12;UBERON:0002028,1.05e-11,12;UBERON:0007277,1.05e-11,12;UBERON:0004732,1.00e-10,13;UBERON:0005383,1.49e-10,3;UBERON:0005382,1.49e-10,3;UBERON:0001870,1.75e-10,3;UBERON:0001894,1.98e-10,7;UBERON:0006222,1.98e-10,7;UBERON:0000988,3.41e-10,3;UBERON:0000483,3.95e-10,306;UBERON:0000119,6.24e-10,309;UBERON:0002680,1.75e-08,9;UBERON:0001895,1.75e-08,9;UBERON:0010092,1.75e-08,9;UBERON:0001873,1.09e-07,2;UBERON:0010122,1.09e-07,2;UBERON:0002771,1.29e-07,2;UBERON:0002702,1.42e-07,2;UBERON:0001954,2.53e-07,2;UBERON:0003022,2.53e-07,2;UBERON:0002421,2.53e-07,2;UBERON:0002600,2.53e-07,2;UBERON:0001905,3.36e-07,2;UBERON:0002757,3.36e-07,2;UBERON:0010134,3.36e-07,2;UBERON:0005408,3.36e-07,2;UBERON:0001899,3.36e-07,2;UBERON:0002148,5.21e-07,2;UBERON:0006331,5.21e-07,2;UBERON:0009662,5.21e-07,2;UBERON:0001876,6.27e-07,2;UBERON:0001875,7.09e-07,2;UBERON:0006514,7.09e-07,2;UBERON:0000923,8.50e-07,560;UBERON:0010316,8.50e-07,560;UBERON:0005291,8.50e-07,560;UBERON:0006598,8.50e-07,560;UBERON:0010317,8.50e-07,560;UBERON:0002532,8.50e-07,560;UBERON:0001897,9.61e-07,2;UBERON:0010225,9.61e-07,2 | |||
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| ||
|short_description=p2@PLXNA4 | |||
}} | }} |
Latest revision as of 10:31, 16 September 2015
Short description: | p2@PLXNA4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PLXNA4_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 0bp_to_ENST00000423507_5end |
EntrezGene: | PLXNA4 |
HGNC: | 9102 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
plasmacytoid dendritic cell | 6.37e-10 | 3 |
neuronal stem cell | 9.48e-10 | 8 |