FFCP PHASE1:Hg19::chr8:124194875..124194920,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr8:124194875..124194920,+ to FFCP PHASE1:Hg19::chr8:124194875..124194920,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=84985 | |EntrezGene=84985 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28210 | |HGNC=28210 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000276699,ENST00000522648_5end | |||
|cluster_id=chr8:124194875..124194920,+ | |||
|coexpression_cluster_id=C4725 | |||
|description=CAGE_peak_2_at_FAM83A_5end | |||
|id=chr8:124194875..124194920,+ | |||
|ontology_enrichment_celltype=CL:0000066!4.84e-39!254;CL:0002076!1.25e-21!43;CL:0000223!1.83e-14!59;CL:0002368!5.02e-13!13;CL:0000076!2.02e-09!62;CL:0002202!9.57e-09!9;CL:0002632!9.57e-09!9;CL:0002159!1.33e-08!13;CL:0002251!2.83e-08!21;CL:0000082!9.45e-08!19 | |||
|ontology_enrichment_celltype_v019=CL:0002368;2.66e-18;13!CL:0002076;4.33e-16;42!CL:0002202;3.82e-12;9!CL:0002632;3.82e-12;9!CL:0002159;3.24e-11;14!CL:0000244;8.06e-08;4!CL:0000731;8.06e-08;4!CL:0002251;1.16e-07;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,2.27e-37,253;CL:0002076,1.16e-20,42;CL:0002368,2.73e-18,13;CL:0000223,7.09e-14,58;CL:0002202,3.94e-12,9;CL:0002632,3.94e-12,9;CL:0002159,3.14e-11,14;CL:0000076,1.04e-09,63;CL:0000244,8.00e-08,4;CL:0000731,8.00e-08,4;CL:0002251,1.20e-07,20 | |||
|ontology_enrichment_development_v019=UBERON:0008947;1.03e-08;29!CL:0000223;3.98e-08;58 | |||
|ontology_enrichment_disease=DOID:305!1.02e-20!106;DOID:0050687!3.45e-14!143;DOID:162!5.93e-11!235;DOID:14566!3.02e-10!239;DOID:1749!8.85e-10!14 | |||
|ontology_enrichment_disease_v019=DOID:1749;2.19e-10;14 | |||
|ontology_enrichment_disease_v019_2=DOID:305,1.53e-17,106;DOID:0050687,5.79e-12,143;DOID:1749,2.16e-10,14;DOID:162,1.93e-07,235;DOID:14566,5.20e-07,239 | |||
|ontology_enrichment_uberon=UBERON:0004119!8.52e-24!169;UBERON:0000925!8.52e-24!169;UBERON:0006595!8.52e-24!169;UBERON:0001004!3.70e-22!72;UBERON:0000065!1.97e-21!53;UBERON:0001007!8.18e-18!155;UBERON:0001555!8.18e-18!155;UBERON:0007026!8.18e-18!155;UBERON:0000072!1.86e-17!46;UBERON:0008947!3.79e-17!38;UBERON:0003258!3.79e-17!38;UBERON:0000077!6.95e-16!130;UBERON:0004921!2.41e-14!129;UBERON:0004185!2.41e-14!129;UBERON:0005153!5.39e-13!37;UBERON:0005911!4.12e-12!82;UBERON:0001041!7.94e-12!98;UBERON:0005178!6.91e-11!34;UBERON:0002224!6.91e-11!34;UBERON:0005157!7.50e-11!51;UBERON:0000161!2.18e-10!35;UBERON:0005181!2.28e-10!35;UBERON:0000464!4.29e-10!104;UBERON:0004807!6.59e-09!28;UBERON:0005156!8.37e-09!59;UBERON:0000990!8.37e-09!59;UBERON:0001557!8.62e-09!19;UBERON:0001737!2.95e-08!9;UBERON:0002048!4.82e-08!22;UBERON:0000117!4.82e-08!22;UBERON:0000171!4.82e-08!22;UBERON:0000170!4.82e-08!22;UBERON:0005597!4.82e-08!22;UBERON:0000118!4.82e-08!22;UBERON:0001048!6.69e-08!168;UBERON:0000466!7.51e-08!126;UBERON:0004802!9.45e-08!19;UBERON:0000115!9.45e-08!19;UBERON:0005631!1.01e-07!14;UBERON:0000158!1.01e-07!14;UBERON:0007196!1.58e-07!14;UBERON:0001558!1.58e-07!14;UBERON:0000064!2.10e-07!219;UBERON:0000063!6.24e-07!97;UBERON:0000365!8.68e-07!5;UBERON:0003100!9.97e-07!41 | |||
|ontology_enrichment_uberon_v019=UBERON:0000065;3.32e-13;44!UBERON:0000072;5.12e-13;37!UBERON:0001737;3.59e-11;9!UBERON:0001557;3.59e-11;9!UBERON:0001004;1.20e-10;65!UBERON:0007196;5.76e-10;15!UBERON:0001558;5.76e-10;15!UBERON:0005631;1.44e-09;10!UBERON:0000158;1.44e-09;10!UBERON:0000365;4.48e-09;5!UBERON:0000486;1.29e-08;12!UBERON:0004807;2.19e-08;22!UBERON:0005911;7.24e-08;36!UBERON:0005181;1.75e-07;35!UBERON:0005178;1.83e-07;34!UBERON:0002224;1.83e-07;34!UBERON:0005910;1.89e-07;6!UBERON:0000058;6.52e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,1.12e-20,160;UBERON:0000925,1.12e-20,160;UBERON:0006595,1.12e-20,160;UBERON:0001004,3.50e-20,74;UBERON:0000065,1.90e-19,54;UBERON:0000072,1.71e-16,47;UBERON:0008947,2.17e-15,38;UBERON:0003258,2.17e-15,38;UBERON:0001007,2.32e-14,145;UBERON:0001555,2.32e-14,145;UBERON:0007026,2.32e-14,145;UBERON:0004921,6.50e-12,118;UBERON:0001737,3.51e-11,9;UBERON:0001041,4.28e-11,87;UBERON:0007196,5.56e-10,15;UBERON:0001558,5.56e-10,15;UBERON:0001557,6.57e-10,19;UBERON:0000161,1.13e-09,36;UBERON:0005631,2.03e-09,14;UBERON:0000158,2.03e-09,14;UBERON:0000365,4.44e-09,5;UBERON:0005178,1.46e-08,34;UBERON:0002224,1.46e-08,34;UBERON:0005181,3.38e-08,35;UBERON:0005910,1.88e-07,6;UBERON:0005911,2.07e-07,82;UBERON:0003102,2.79e-07,99;UBERON:0005153,2.90e-07,37;UBERON:0005157,8.88e-07,47 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,9.09215565055583,23.7252397110625,28.3973783769224,24.5303289752462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464448369948228,103.894598366119,81.928009907684,67.2952298503554,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.472674085820339,0,0,0.0654895377488563,143.532343587262,74.1568885568859,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,48.8425338399638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71141546463335,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,95.6641223158319,40.3664258474435,77.437240755031,0,0,0,0,0,0,0,0,0,0,0,2.60274960087657,3.70886318171824,2.89213235860178,4.74264082749294,3.05031221729369,3.32178866755535,3.50561401216427,4.31687223275761,6.15595451114225,0,0,0,0,0,0,0,0,0.245976877086227,6.17644117074692,76.9349500714465,60.6969467591146,132.999830500588,26.9432375411321,0,0,0,0.115930404975077,0,0,0,0,1.58040879591855,0,0,0,0,3.74935335947108,30.4047652039936,30.0563206153859,11.5530494286674,14.5316969256981,22.2361953915822,0,0,0,0,0,0.126995788584338,0,0,3.4214489204541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602878754119172,0,0.99972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0,0,0,0,0,0,2.12189300012382,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0.241718899183244,73.3853681310023,28.6371875590638,0,0,0.393373244878272,0.451199612907412,0.847168708148562,0,0,0.105551628892876,0,0,0,0,0,0,1.01950509218015,1.66215201785745,0,0,0.261435451024901,0,0,0,0.309123034943167,0,0,78.6743787054756,21.4519881192052,0,0,0,0,0,0,0,0.0852266274161009,0,76.5269158121329,48.2397069086416,52.8316629727578,49.4661548383639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,61.3897079188767,80.4362730642945,49.0009431875952,0.0941438007767792,100.738257205068,53.9108722136402,51.8813279637911,22.512893220282,0,0,0,0,0,0,0,0,0,0,29.4048259177238,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.23087398947712,0,0.33307196799782,0,0,0,0,0,0,52.5237866422918,13.0664459566361,60.5106583135487,0,0,0.333926115068718,0,0,0.398495976502139,0.276283915531148,0,0,0,0,11.6828856491525,35.8042349351218,0,1.479651084554,0,0,0,0,0,2.08342208868187,0.262379999988587,0,0.455173793141999,19.0690237719575,0.945550727071745,0,0,0,0,0,0,0,0,0,6.31843088410143,21.0529853860691,14.4666485987138,0,0,0,0.108647371922008,14.0360510282045,3.29751336246704,11.72676507241,0,0,0.166211681900156,2.93274358802335,4.31337575499027,2.51732380463764,1.89753732724185,0.794682894901893,0,6.8557779426842,0,0,0,0.353830258013357,0,0,0,0,0,0,0,0,6.45693242475896,0,3.94584402849391,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0.173559738335131,49.3881682968463,50.7555174363747,1.22308667769421,7.91135749369436,21.6734182087551,39.1027846411093,27.9192553980911,35.6919580677383,0,11.2990370390266,0.274083849293502,0.19871461170299,0,1.36885967914362,25.6508224804908,0.85381197895741,0.999048047910651,0.144090417154106,0,0,2.44893156579854,0,64.5801654850019,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0.134366944973453,0,0,0,0,0,0,0,0,0,0,0,0.415440338029185,0.2249738915515,0,0,11.0693446907758,0.0788057072991982,0.0524545881349981,0.316801009558219,0.896436696664224,10.1715054579306,0,0,0,0,0,0,0,6.15693905620042,0,0,0,0,0,0,3.25064991980226,4.22889013390003,0.213574825135389,0,0.414239055347196,0,0,0,52.3439831371549,0,0,0,0,0,0,0,0,0,0,0,0,0.249960815924213,0,0,0.470531639396343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0,0.761610424337591,0.813741466409323,0,0.966695013382396,0,0,0,0,0,0,0,3.43106546199881,7.82982875895635,0,0.231522474323834,0.244736704506468,0.179088841081487,49.7170329929165,1.09642024789354,90.4648427242911,1.54331230616732,1.35153952522458,0,0,0,0,0,0,0,0,0,23.4556456928076,0,0,0,0,0,30.7734916982778,43.5454082023081,0,0,0.157265941855896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,22.96656612924,0,11.7394303053875,10.0507329550794,0,0,0,0.451261970095544,0,0,0,13.1017534008077,108.674223369528,0,0,0,0,0,0,0.992422356778588,0,9.45441964533005,0,0,0,0,1.1531308121143,0,0,0,0,84.6267900729212,0.778619813244484,1.25588948560822,0,0,0,0,0,0.142953088353313,0,0,0,0,2.27937780579341,2.0486217251274,0.691259661814092,0.430227358820278,0,0,7.62096690343672,0.9164274741762,0.31020638566432,1.91107787795487,0,0,10.7287773984397,0,0,0,0.971421986118279,0,0,0,0,0,0.452888530700021,1.85217979459067,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,29.1042919927222,45.8763333230399,0.160482733378337,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203977659483963,1.87052183685892,0.275684698604535,0,0,0,0,0,8.31612529413825,0.476128862927481,0.193766729508018,0.248298857183432,0.560659312903067,0.445530107947154,0,8.27323642008453,3.76456631193809,22.4282336538576,32.7053256590604,2.99394320891412,12.5361033660901,0,0,0.359300808426348,2.34640942403454,0.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| ||
|short_description=p2@FAM83A | |||
}} | }} |
Latest revision as of 00:21, 16 September 2015
Short description: | p2@FAM83A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_FAM83A_5end |
Coexpression cluster: | C4725_Corneal_Keratinocyte_mesothelioma_Bronchial_Urothelial_papillotubular_Gingival |
Association with transcript: | 0bp_to_ENST00000276699, ENST00000522648_5end |
EntrezGene: | FAM83A |
HGNC: | 28210 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 2.27e-37 | 253 |
endo-epithelial cell | 1.16e-20 | 42 |
respiratory epithelial cell | 2.73e-18 | 13 |
endodermal cell | 7.09e-14 | 58 |
epithelial cell of tracheobronchial tree | 3.94e-12 | 9 |
epithelial cell of lower respiratory tract | 3.94e-12 | 9 |
general ecto-epithelial cell | 3.14e-11 | 14 |
squamous epithelial cell | 1.04e-09 | 63 |
transitional epithelial cell | 8.00e-08 | 4 |
urothelial cell | 8.00e-08 | 4 |
epithelial cell of alimentary canal | 1.20e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 1.12e-20 | 160 |
endoderm | 1.12e-20 | 160 |
presumptive endoderm | 1.12e-20 | 160 |
respiratory system | 3.50e-20 | 74 |
respiratory tract | 1.90e-19 | 54 |
segment of respiratory tract | 1.71e-16 | 47 |
respiratory primordium | 2.17e-15 | 38 |
endoderm of foregut | 2.17e-15 | 38 |
digestive system | 2.32e-14 | 145 |
digestive tract | 2.32e-14 | 145 |
primitive gut | 2.32e-14 | 145 |
subdivision of digestive tract | 6.50e-12 | 118 |
larynx | 3.51e-11 | 9 |
foregut | 4.28e-11 | 87 |
tracheobronchial tree | 5.56e-10 | 15 |
lower respiratory tract | 5.56e-10 | 15 |
upper respiratory tract | 6.57e-10 | 19 |
orifice | 1.13e-09 | 36 |
extraembryonic membrane | 2.03e-09 | 14 |
membranous layer | 2.03e-09 | 14 |
urothelium | 4.44e-09 | 5 |
thoracic cavity element | 1.46e-08 | 34 |
thoracic cavity | 1.46e-08 | 34 |
thoracic segment organ | 3.38e-08 | 35 |
transitional epithelium | 1.88e-07 | 6 |
endo-epithelium | 2.07e-07 | 82 |
surface structure | 2.79e-07 | 99 |
epithelial bud | 2.90e-07 | 37 |
epithelial fold | 8.88e-07 | 47 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.53e-17 | 106 |
cell type cancer | 5.79e-12 | 143 |
squamous cell carcinoma | 2.16e-10 | 14 |
cancer | 1.93e-07 | 235 |
disease of cellular proliferation | 5.20e-07 | 239 |