FFCP PHASE1:Hg19::chr9:115950749..115950771,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr9:115950749..115950771,+ to FFCP PHASE1:Hg19::chr9:115950749..115950771,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr9:115950749..115950771,+ | |||
|coexpression_cluster_id=C4791 | |||
|description=CAGE_peak_at_chr9:115950749..115950771,+ | |||
|id=chr9:115950749..115950771,+ | |||
|ontology_enrichment_celltype=CL:0002057!1.69e-37!42;CL:0000557!2.62e-35!71;CL:0000839!7.96e-35!70;CL:0000860!8.16e-34!45;CL:0002194!2.84e-32!63;CL:0000576!2.84e-32!63;CL:0000040!2.84e-32!63;CL:0000559!2.84e-32!63;CL:0002009!6.20e-32!65;CL:0000766!7.40e-32!76;CL:0000763!6.37e-18!112;CL:0000049!6.37e-18!112;CL:0000134!4.46e-17!358;CL:0002320!5.57e-16!365;CL:0000048!2.09e-15!430;CL:0000219!3.51e-15!390;CL:0000723!1.36e-14!436;CL:0000034!1.49e-13!444;CL:0002031!2.58e-13!124;CL:0000738!2.03e-11!140;CL:0002087!6.41e-11!119;CL:0000063!7.61e-10!578;CL:0000144!1.85e-09!625;CL:0000548!8.21e-08!679;CL:0000004!8.21e-08!679;CL:0000255!8.21e-08!679;CL:0002371!1.30e-07!591;CL:0000012!1.51e-07!682;CL:0002032!1.66e-07!165;CL:0000837!1.66e-07!165;CL:0000077!4.31e-07!19;CL:0000037!5.94e-07!172;CL:0000566!5.94e-07!172 | |||
|ontology_enrichment_celltype_v019=CL:0000860;5.31e-61;33!CL:0002057;5.31e-61;33!CL:0000473;2.74e-54;39!CL:0000234;2.74e-54;39!CL:0000576;5.77e-34;48!CL:0000766;3.03e-24;69!CL:0000763;9.68e-12;100!CL:0002087;5.42e-08;104!CL:0000235;7.66e-07;6!CL:0000738;9.33e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,4.94e-67,48;CL:0000234,4.94e-67,48;CL:0000860,9.53e-62,42;CL:0002057,9.53e-62,42;CL:0000839,4.45e-56,66;CL:0000557,4.45e-55,67;CL:0002194,1.91e-54,59;CL:0000576,1.91e-54,59;CL:0000040,1.91e-54,59;CL:0000559,1.91e-54,59;CL:0000766,4.14e-53,72;CL:0002009,2.50e-52,61;CL:0000763,1.30e-31,108;CL:0000049,1.30e-31,108;CL:0002031,7.84e-26,120;CL:0002087,7.00e-23,115;CL:0000738,9.08e-23,136;CL:0002032,1.67e-17,161;CL:0000837,1.67e-17,161;CL:0000037,2.56e-16,168;CL:0000988,6.16e-15,177;CL:0000134,1.41e-14,354;CL:0002320,5.36e-14,361;CL:0000219,1.51e-13,386;CL:0000048,1.22e-12,427;CL:0000723,3.06e-12,433;CL:0000034,1.01e-11,441;CL:0000235,8.94e-07,6 | |||
|ontology_enrichment_development_v019=CL:0002057;2.94e-45;42!CL:0000049;5.06e-09;108 | |||
|ontology_enrichment_disease=DOID:2394!4.74e-09!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!3.89e-35!80;UBERON:0001474!4.81e-31!86;UBERON:0004765!1.45e-29!101;UBERON:0001434!1.45e-29!101;UBERON:0002390!2.48e-26!102;UBERON:0003061!2.48e-26!102;UBERON:0002193!7.42e-24!112;UBERON:0002405!3.82e-23!115;UBERON:0002204!1.18e-20!167;UBERON:0002384!5.91e-16!375;UBERON:0003081!1.98e-09!216;UBERON:0000926!9.94e-09!448;UBERON:0004120!9.94e-09!448;UBERON:0006603!9.94e-09!448 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.93e-58,76;UBERON:0001474,4.04e-53,82;UBERON:0004765,8.73e-50,90;UBERON:0002405,1.43e-47,93;UBERON:0001434,1.43e-43,100;UBERON:0002390,1.80e-42,98;UBERON:0003061,1.80e-42,98;UBERON:0002193,3.00e-39,108;UBERON:0002204,4.53e-26,167;UBERON:0003081,2.85e-19,203;UBERON:0000926,3.68e-14,315;UBERON:0004120,3.68e-14,315;UBERON:0006603,3.68e-14,315;UBERON:0002384,5.86e-14,371 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0,0,0,0.872338524100369,0,0,0.261185628199839,0,0,0,0.263766978228454,0,0,2.6893005858071,0.602694528023977,0,0,0,0,0,0,0,0,0,0,0,0,0,1.39334510984468,0,0,0,0,0,0,2.76997704265939,1.60435557976113,0.868043482863407,0,1.94336199611388,0.257575567634187,3.48955773070955,1.88937971844405,1.69808842831471,3.25400651667958,6.57868620834921,4.64559556342655,6.61692502340946,8.96562472851852,9.22280696565482,5.17118521104928,7.74581620300591,9.47985406160392,5.27078550719293,6.00393530127261,6.51698104890745,7.65209730927256,12.5162320559677,3.19668562899521,2.96866170168044,3.78980949481101,3.83602275479425,7.83564944297177,5.10646702222026,3.73693349397345,6.02996796616184,6.25779502104242,16.0719745081786,1.21079900526674,7.73383035573886,7.27863491114034,0.422510572623884,0.637812899895131,1.46761051855863,0.112328631146495,0.600707571366025,0.32145117339416,0,0.19891667719909,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318565414324097,0,0,0,0.127986611154418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0.324547393654683,0,0.398873881556595,0,0,0,0,0.860234595106124,0,0.56530794192401,0,0,0,0,1.06729878806013,0.33472061276467,0,0,0,0,0,0,0.22452937262617,0,0,0,0,0,0,0,0,0.12663051166458,6.48804985984772,1.43418310374407,0,0,0,0,0,0.404132016209064,0,0,0,0,1.24864030732128,1.71141546463335,0.298897361103602,0.117434498643765,0,0,0.204154171254893,0,0.103325781175765,0,0,0,0,0,0,0.554128230968366,0,0.30648779579902,0.45071417671979,0,0.179389635688862,0,0,0,0,0.257640540045629,0.18611685633159,0,0,0,0,0,0,0,0,1.15956511897978,0.545492241181669,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47730203652438,2.57404691653161,2.0808362720422,2.81201501960331,0,0.708875486211932,0,0,0,7.8826118063351,0.968532774145487,1.03664057770386,1.44119953416961,0.75745460055828,0.063497894292169,0,0,0,0.205654985406647,0.901029173531752,0,1.68196626518041,0,0.22001485746285,0,0,0,0.797814349754612,0,0,0,0,0,0,0,0.65147236858747,0,0,3.91871190177462,1.74306691720059,0.399891964728228,0,0,2.10833939483032,0,0,1.42636905040718,0.434343920002738,0,0,0,0,0,0.128343036279748,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173767228936166,0,0,0,0.431428401637234,0,0,0,0,0.496215615637554,1.53461973288062,0,1.79394808957981,0.511707249066704,0.160853921143607,0,0.308419387605311,1.06537035187876,0.492762936082855,1.55776328755086,0.813472649219715,0,0,0,0.34444334449382,0.364182336013434,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515205058238611,0,0,0,0,0,0,0.154048617114644,0.15350367472613,0.413509717453592,0.322260734604821,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0.372158369359667,0,1.33441135746677,0,0,0,0,0.719489830333259,0,0.353437207037059,0,0,0,0,1.21856744815642,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.709522128141196,0,0.329294892959902,0,0,0,0.670302275535787,0,0,0,0,0,0,0,0,0,0.238231775457789,0,0,0.540031437238115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0.284136146806413,0,0,0,0,0,1.8922479853894,0,0,0.19924798825107,0,0,0,0,0,0.0898683511473268,0,0.511572370226872,0,0,2.22273980289274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569710279235006,0,0,0,0,0,0.533034776018635,0,0.31396051279005,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242780379534093,0,0,0,0.063186579628488,0,0,0,0,0.627865836814451,0,0,0,0,0,0,0,1.20390222730132,0,0,0,0,0,0,0.137041924646751,0.19871461170299,0,0,0.240476460754601,0,0,0,0,0,0.720273989940749,0.621262677827163,0,0,0.209205692624666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.360299883542404,0,0,0,0.0674035438541849,0,0,0,0,0,0,0,0.2249738915515,0,0,0,0,0,1.37280437475228,0,0,0,0,0,0,0,0.326587360109409,0,0,0.170388021785422,0,0.146552233678082,0,0.129282956361551,0.13223260174269,0,0,0.213574825135389,0,0,0,0,0,0,0,0.2506898940227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.74627401443437,0.701139929541673,2.21922344601045,8.14432922682883,1.0062716070103,6.22867855117575,3.20376095755693,0.151230923763239,0.310874401165561,0.147855149989634,0.796483835818512,15.2933058135626,0.776314784381297,0,1.32920857278997,2.60872530905867,0.901545653983311,2.28483127301277,0.406870733204662,0.727394636810238,0.322231671127465,9.28067519756987,2.78667122089031,0,0.686791410365586,0.673498977531838,0,0.385239660814607,0.214441591374926,0.521988583930423,0,0,0.97894681802587,0.179088841081487,0.617602894321944,0.657852148736121,0.883445729729405,1.92914038270915,1.01365464391844,0,0,2.73473960559644,0,0,0,0.163565394255844,0,0.737318726261158,0,0,0,0,0.567515953566836,1.65695355226657,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159633859057151,0,0,0,0,0,0,0,0,0.115525666150338,0,0,0,0.0752103283492573,0,0,0,0.655087670040387,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177404740325278,0,0.171488009437418,0.0679697329768317,0,0,0,0,0.157115589916002,0,0,0,0,0,0,0,0,0,0,0.17071847709395,0,0,15.73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| ||
|short_description=p@chr9:115950749..115950771,+ | |||
}} | }} |
Latest revision as of 21:54, 31 July 2015
Short description: | p@chr9:115950749..115950771, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr9:115950749..115950771, + |
Coexpression cluster: | C4791_schwannoma_CD14_mesenchymal_Mast_Fibroblast_Mesothelial_Macrophage |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 4.94e-67 | 48 |
phagocyte | 4.94e-67 | 48 |
classical monocyte | 9.53e-62 | 42 |
CD14-positive, CD16-negative classical monocyte | 9.53e-62 | 42 |
myeloid lineage restricted progenitor cell | 4.45e-56 | 66 |
granulocyte monocyte progenitor cell | 4.45e-55 | 67 |
monopoietic cell | 1.91e-54 | 59 |
monocyte | 1.91e-54 | 59 |
monoblast | 1.91e-54 | 59 |
promonocyte | 1.91e-54 | 59 |
myeloid leukocyte | 4.14e-53 | 72 |
macrophage dendritic cell progenitor | 2.50e-52 | 61 |
myeloid cell | 1.30e-31 | 108 |
common myeloid progenitor | 1.30e-31 | 108 |
hematopoietic lineage restricted progenitor cell | 7.84e-26 | 120 |
nongranular leukocyte | 7.00e-23 | 115 |
leukocyte | 9.08e-23 | 136 |
hematopoietic oligopotent progenitor cell | 1.67e-17 | 161 |
hematopoietic multipotent progenitor cell | 1.67e-17 | 161 |
hematopoietic stem cell | 2.56e-16 | 168 |
hematopoietic cell | 6.16e-15 | 177 |
mesenchymal cell | 1.41e-14 | 354 |
connective tissue cell | 5.36e-14 | 361 |
motile cell | 1.51e-13 | 386 |
multi fate stem cell | 1.22e-12 | 427 |
somatic stem cell | 3.06e-12 | 433 |
stem cell | 1.01e-11 | 441 |
macrophage | 8.94e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.93e-58 | 76 |
bone element | 4.04e-53 | 82 |
skeletal element | 8.73e-50 | 90 |
immune system | 1.43e-47 | 93 |
skeletal system | 1.43e-43 | 100 |
hematopoietic system | 1.80e-42 | 98 |
blood island | 1.80e-42 | 98 |
hemolymphoid system | 3.00e-39 | 108 |
musculoskeletal system | 4.53e-26 | 167 |
lateral plate mesoderm | 2.85e-19 | 203 |
mesoderm | 3.68e-14 | 315 |
mesoderm-derived structure | 3.68e-14 | 315 |
presumptive mesoderm | 3.68e-14 | 315 |
connective tissue | 5.86e-14 | 371 |